Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30615
(840 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 42 8e-04
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 42 8e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 41 0.001
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 39 0.004
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 38 0.008
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 37 0.018
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_45828| Best HMM Match : S-antigen (HMM E-Value=0.0095) 35 0.094
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 35 0.094
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.094
SB_57060| Best HMM Match : W2 (HMM E-Value=2.5) 34 0.17
SB_48974| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_39482| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 33 0.29
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 32 0.50
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 32 0.50
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 32 0.50
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 32 0.67
SB_30324| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_5902| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 31 1.5
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 31 1.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 30 2.0
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 30 2.0
SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 30 2.7
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 29 3.6
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 29 3.6
SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) 29 3.6
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 29 3.6
SB_51167| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 3.6
SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_21829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 29 4.7
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 4.7
SB_11279| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 29 6.2
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 6.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 6.2
SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 29 6.2
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 28 8.2
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 28 8.2
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_31280| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 28 8.2
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 28 8.2
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD 253
C K DG Y D + C +++C G + K CPDGL F+ I+ CD+P V+
Sbjct: 228 CAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIK---SCDEPSKVN 278
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 325 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGQTRMQRTTKKNKGRL 498
+ DP C+ +Y C +G + + C GL F+ +C P QR ++ + ++
Sbjct: 236 YADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNCVTKQRDEEEEEEKV 293
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 110 GQYEDDRQCDKFFECVDGVATTKL--CPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPP 283
G Y D R C +F++C D T L CPDGL + +++K CD P VD + + P
Sbjct: 1349 GHYADPRDCSRFYQC-DASHKTFLHRCPDGLKW--SVKK-TACDLPLYVD----CDRTIP 1400
Query: 284 SLTHNVPAAMDSLPIPTP 337
++ +P+ S P PTP
Sbjct: 1401 TVATGLPSPSPSPPTPTP 1418
Score = 36.7 bits (81), Expect = 0.023
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPP 283
+G Y D R C KF++C A CP GL + +++K CD P VD S+PP
Sbjct: 893 NGHYADPRDCSKFYQCDAFHRAFLHRCPAGLKW--SVKK-TACDWPRYVD-CDRTTSTPP 948
Query: 284 SLTHNVP 304
+ T + P
Sbjct: 949 TPTTHTP 955
Score = 35.1 bits (77), Expect = 0.071
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFECVDGVATTKL--CPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSP 280
+G Y D R C +F++C D T L CP GL + +++K CD P VD S+P
Sbjct: 1143 NGHYADPRDCSRFYQC-DAFHKTFLHRCPAGLKW--SVKK-TACDWPRYVD-CDRTTSTP 1197
Query: 281 PSLT 292
P+ T
Sbjct: 1198 PTPT 1201
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 116 YEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD 253
Y D R C + ++C + A K CP GL ++ I K N CD P NV+
Sbjct: 1462 YHDPRNCSRLYQCDIFHRAFLKSCPHGLKWN--IEK-NACDHPVNVN 1505
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 95 CPAK-DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGL 268
C K +G Y D R C +F++C A CP GL + +++K CD P VD
Sbjct: 1238 CKEKPNGHYADPRDCSRFYQCDAFHRAFLHRCPAGLKW--SVKK-TACDWPRYVD-CDRT 1293
Query: 269 NSSPPSLTHNVP 304
S+PP+ T P
Sbjct: 1294 TSTPPTPTPLTP 1305
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 310 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 441
NG++A DP C+ FY C + +C+ GL + TC WP
Sbjct: 788 NGYYA--DPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWP 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 310 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 441
NG +A DP C+ FY C + +C AGL + TC WP
Sbjct: 998 NGHYA--DPMDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWP 1040
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 310 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 441
NG +A DP C+ FY C T + +C AGL + C WP
Sbjct: 1143 NGHYA--DPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWP 1185
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPP 283
+G Y D R C +F++C A C GL + +I K CD P NVD +PP
Sbjct: 788 NGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKW--SITK-TTCDWPRNVD-CDRKTPTPP 843
Query: 284 SLT 292
S T
Sbjct: 844 SPT 846
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 310 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 441
NG +A DP C+ FY C + +C AGL + C WP
Sbjct: 893 NGHYA--DPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 935
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 310 NGFFAHPDPSVCNIFYNCIEGEATEV-KCTAGLHFDEYSGTCVWP 441
NG +A DP C+ FY C + +C AGL + C WP
Sbjct: 1243 NGHYA--DPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 1285
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD 253
+G Y D C +F++C A CP GL + +++K CD P VD
Sbjct: 998 NGHYADPMDCSRFYQCDAFHRAFLHRCPAGLKW--SVKK-TTCDWPRYVD 1044
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +2
Query: 89 FKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGL 268
F DG Y+D C+ F C + + CP+ L F+PT + CD P NV
Sbjct: 442 FCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTK---HCDNPENVQCG--- 495
Query: 269 NSSPPSLTHNVPAAMDSLPIPTPLC 343
+ PP T VP + +P C
Sbjct: 496 PTRPP--TPKVPPTTKAPFTKSPFC 518
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 74 IASAQFKCPAKDGQYEDDRQCDKFFECVDG-VATTKLCPDGLVFDPTIRKINKCDQPFNV 250
+ + F +DG Y D C+ + C +G + CP GL F+ I CD P NV
Sbjct: 310 LVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFN---EAIGMCDYPSNV 366
Query: 251 DSAIGLNSS 277
G + S
Sbjct: 367 PGCSGSSGS 375
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = +1
Query: 277 PPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPD 444
PPK ++NG +A DPS CN F C G A + C L FD C WP+
Sbjct: 591 PPKSPFCEEKKNGDYA--DPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPN 644
Score = 35.5 bits (78), Expect = 0.054
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +2
Query: 59 TAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQ 238
T A + F ++G+Y D C+ F C +G CP L +DP +C+
Sbjct: 507 TTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPA---KGRCEW 563
Query: 239 PFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTP 337
VD P+++ + P P PTP
Sbjct: 564 ADTVDC-----GQRPTISPHPPKPTTMPPQPTP 591
Score = 35.1 bits (77), Expect = 0.071
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 304 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 447
++NG +A D + CN F C G + C + L +D G C W D+
Sbjct: 521 KQNGKYA--DANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADT 566
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 104 KDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD 253
K+G Y D C+ F C +G A + CP L FD +K+ +C+ P V+
Sbjct: 601 KNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFD--TKKL-ECEWPNKVN 647
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 265 TELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWP 441
T+ PP NS+ ++NG + DP C + C G C GL F+ + C P
Sbjct: 659 TKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLP 717
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 304 RRNGFFAHPDPSVCNIFYNCIEGEATEVK-CTAGLHFDEYSGTCVWPDS 447
R++G +A D S CN++ C G + C GL F+E G C +P +
Sbjct: 319 RQDGNYA--DSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSN 365
Score = 32.3 bits (70), Expect = 0.50
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCD 235
DG Y+D C F C +G CP FDP ++ D
Sbjct: 383 DGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCEDYD 425
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 289 NSQCPRR-NGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA 450
NS C +R NG +AHP+ C ++ C E +C AGL++++ C WP +A
Sbjct: 59 NSFCKKRANGDYAHPEN--CKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNA 111
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 50 IVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKIN 226
IV +VA A + +G Y D R C +F++C A CP GL + T
Sbjct: 8 IVCFSVALATDATYCLSLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVT---KT 64
Query: 227 KCDQPFNVDSAIGLNSSPP 283
CD P VD IG PP
Sbjct: 65 TCDWPRYVDCDIGGAYKPP 83
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 331 DPSVCNIFYNCIE-GEATEVKCTAGLHFDEYSGTCVWP 441
DP C+ FY C +A C +GL + TC WP
Sbjct: 32 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 69
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 304 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA 450
R +G + HPD C ++ C G A E+ C AGL++++ C WP +A
Sbjct: 89 RADGNYPHPD--FCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNA 135
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFN 247
DG Y C + C +G+A CP GL ++ + CD PFN
Sbjct: 91 DGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWND---EKKYCDWPFN 134
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 14 EYLNKKVIMRVFIVLTAVAAIA-SAQFK---CPAK-DGQYEDDRQ-CDKFFECVDGVATT 175
++ K + + V +V A+ + +A C K DG+Y D C F C + A+
Sbjct: 45 QFAMKALTLLVLLVTGAICTVTVTADIHDDFCKYKPDGEYRDPYDACRGFIHCHNYNASY 104
Query: 176 KLCPDGLVFDPTIRKINKCDQPFNVDSAIG 265
K CP GL+++ K +CD P NVD +G
Sbjct: 105 KPCPGGLLYN---EKTKQCDWPRNVDCPMG 131
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGLN 271
C K G Y D++ KF C +GV + C GLVF+P + + DQ + +G
Sbjct: 7 CKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQRYTKPKKVGRK 66
Query: 272 S 274
S
Sbjct: 67 S 67
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 38.3 bits (85), Expect = 0.008
Identities = 31/124 (25%), Positives = 50/124 (40%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGR 457
PP+ VP S PT + T ASKV P +S P ++ P + +PP
Sbjct: 682 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPP-- 739
Query: 458 QGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP*TS 637
++ + +VP A P ++ P+ + T + V P + + P T
Sbjct: 740 TDASKVPPTDANASKVPTTDASKVPPTDASKVPPTDASKVPTTDASKVPPTDASKVPPTD 799
Query: 638 AAKV 649
A+KV
Sbjct: 800 ASKV 803
Score = 36.3 bits (80), Expect = 0.031
Identities = 31/124 (25%), Positives = 49/124 (39%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGR 457
PP+ VP S PT + T ASKV P +S P ++ P + +PP
Sbjct: 586 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPP-- 643
Query: 458 QGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP*TS 637
+ + D +VP A P ++ P+ + + V P + + P T
Sbjct: 644 --TDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 701
Query: 638 AAKV 649
A+KV
Sbjct: 702 ASKV 705
Score = 35.9 bits (79), Expect = 0.041
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGR 457
PP+ VP S PT + T ASKV P +S P ++ P + +PP
Sbjct: 650 PPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTD 709
Query: 458 QG----CNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQR--TCNGFYVMP*NGV 619
+ + D +VP A P ++ P+ N + T + V P +
Sbjct: 710 ASKVPPTDASKVPPTDASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPPTDAS 769
Query: 620 EPP*TSAAKV 649
+ P T A+KV
Sbjct: 770 KVPPTDASKV 779
Score = 32.3 bits (70), Expect = 0.50
Identities = 29/117 (24%), Positives = 46/117 (39%)
Frame = +2
Query: 299 VPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGRQGCNEQQ 478
VP S PT + T ASKV P +S P ++ P + +PP + +
Sbjct: 585 VPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPP----TDASK 640
Query: 479 KKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP*TSAAKV 649
D +VP A P ++ P+ + + V P + + P T A+KV
Sbjct: 641 VPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKV 697
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFEC-VDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPP 283
+G Y D R C +F++C A CP GL + T CD P VD IG PP
Sbjct: 120 NGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVT---KTTCDWPRYVDCDIGGAYKPP 176
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 MRVFIVLTAVAAIASAQFK--CPAKD-GQYEDDRQCDKFFECVDGVAT-TKLCPDGLVFD 205
M+ ++L A ++A A C +D G Y D + C K+++C D T + C + L +
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWS 60
Query: 206 PTIRKINKCDQPFNVD 253
++ I CD +VD
Sbjct: 61 -AVKNI--CDHAADVD 73
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 331 DPSVCNIFYNCIE-GEATEVKCTAGLHFDEYSGTCVWP 441
DP C+ FY C +A C +GL + TC WP
Sbjct: 125 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 162
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLP-IPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 451
PP L P + P +PT +STT PP S++ P +T P P P+PP
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPPLPP 977
>SB_45828| Best HMM Match : S-antigen (HMM E-Value=0.0095)
Length = 250
Score = 34.7 bits (76), Expect = 0.094
Identities = 26/101 (25%), Positives = 42/101 (41%)
Frame = +2
Query: 347 ISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGRQGCNEQQKKTKDGFRVPKRAAG* 526
+ T ASKV P +S P ++ P + +PP N + T D +VP A
Sbjct: 5 VPPTDASKVPPTDASKVPTTDASKVPPTDASKVPP--TDANASKVPTTDASKVPTTDASK 62
Query: 527 CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP*TSAAKV 649
P ++ P+ + + V P + + P T A+KV
Sbjct: 63 VPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKV 103
Score = 31.5 bits (68), Expect = 0.88
Identities = 29/123 (23%), Positives = 45/123 (36%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGR 457
P + VP S PT + T ASKV P +S P ++ P +PP
Sbjct: 56 PTTDASKVPPTDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPTTDVSKVPP-- 113
Query: 458 QGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP*TS 637
+ + D +VP A P ++ P+ + + V P + + P T
Sbjct: 114 --TDASKVPPTDASKVPPTDASKVPPTDAIKAPPTHVSKVPPTDASKVPPTDASKVPPTD 171
Query: 638 AAK 646
A K
Sbjct: 172 AIK 174
Score = 29.1 bits (62), Expect = 4.7
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCA-ISSTTASKVKPPRSSVRPVFISTSTPVPA--SGPIP 448
PP+ VP D+ +PT + + T ASKV P ++ V + ++ VP + +P
Sbjct: 6 PPTDASKVPPT-DASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPTTDASKVP 64
Query: 449 PGRQGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP 628
P + + D +VP A P ++ + + T + V P + + P
Sbjct: 65 P----TDASKVPPTDASKVPPTDASKVPPTDASKVPTTDASKVPTTDVSKVPPTDASKVP 120
Query: 629 *TSAAKV 649
T A+KV
Sbjct: 121 PTDASKV 127
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 34.7 bits (76), Expect = 0.094
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 205
DG Y + C F C G+A K CP GL+F+
Sbjct: 463 DGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN 495
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 34.7 bits (76), Expect = 0.094
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +2
Query: 17 YLN-KKVIMRVF---IVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLC 184
Y+N + I+RVF AI S+Q+ CP DG + D ++ C C
Sbjct: 2149 YINGRSGIIRVFPSPSKTNLTEAILSSQYDCPTSDGFFPDPASNGRYIHCSGNSPEIMSC 2208
Query: 185 PDGLVFDPTIR 217
PD + + I+
Sbjct: 2209 PDKMTWQNDIK 2219
>SB_57060| Best HMM Match : W2 (HMM E-Value=2.5)
Length = 152
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFIST 415
SPPS + + P A L +PTP + TT K K SVR T
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTKPKAKKSAESVRKQIAKT 145
>SB_48974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFIST 415
SPPS + + P A L +PTP + TT K K SVR T
Sbjct: 99 SPPSSSPSTPFARSELALPTPPYSTPRTTKPKAKKSAESVRKQIAKT 145
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 33.9 bits (74), Expect = 0.17
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Frame = +2
Query: 296 NVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGRQGCNEQ 475
+VP + + + TP I S V PP SS PV ISTS P A+ P P +
Sbjct: 486 DVPGSSSMMDVTTPSSGIYSMPVLGV-PPASSGIPVSISTSNP-NATSPRP------SIL 537
Query: 476 QKKTKDGFRVPKRAA---G*CPKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEPP*TSAAK 646
+K+T +G R P G P + + P SP T N +PP + ++
Sbjct: 538 RKRTSEGLRKPTIVPYNDGGAPSSQAEK--PGSPRSDTTTLSAPQSGQNSPKPPSDAGSQ 595
Query: 647 VREKVYNEEEP 679
++V P
Sbjct: 596 SNDQVAPSTTP 606
>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKV-KPPRSSVRPVFISTSTPVPASGPI 445
SPPS + + P A L +PTP + TT K K S+ V T TP+ S P+
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTRPKAEKSAESTALRVGKHTHTPLVGSQPL 156
>SB_39482| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFIST 415
SPPS + + P A L +PTP + TT K K SVR T
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTKPKAKKSAESVRKQIAKT 145
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 38 MRVFIVLTAVAAIASAQFK--CPAKD-GQY-EDDRQCDKFFECVDGVATTKLCPDGLVFD 205
M++ I + A A + ++ C K G Y D C ++ C G A K C G V+D
Sbjct: 1 MKIVIYVLAFAGLVASVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
Query: 206 PTIRKIN 226
P I N
Sbjct: 61 PRITNCN 67
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 328 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 438
PD + C +Y+C G+A C G +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 272 SSPPSLTHNVPAAMDSLPIPTPLCAISST--TASKVKPPRSSVRPVFISTSTPVPAS-GP 442
S PS ++PA + P TP+ ISST A PP + P + S PVP+ P
Sbjct: 889 SYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQAPPTLPPTTLTTPSW-SQPVPVPSMYQP 947
Query: 443 IPPG 454
PPG
Sbjct: 948 QPPG 951
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 AIASAQFKCPAKD-GQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQP 241
+I S +F C K G Y D +C F C T + CP G + T + C P
Sbjct: 103 SIGSLEF-CEGKPFGNYADTARCAGFISCASNGMTRQACPSGTQWQTTGPGVGICTCP 159
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 95 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDG 193
C K DG Y D +CD + CV G CP G
Sbjct: 172 CRGKADGDYPDTSRCDGYVSCVSGYIYYMPCPAG 205
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 325 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA 450
+PD S C+ + +C+ G + C AG + CV P ++
Sbjct: 180 YPDTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACVDPSAS 221
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 107 DGQYEDDRQCDKFFECVDGVATTKLCPDGL 196
DG Y +CD + C +G+A CP GL
Sbjct: 341 DGNYAHPSKCDMYITCSNGIAHEMPCPAGL 370
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 257 AIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTP 424
A GL++ P + + P+ PIP +SST S + + + P +ST TP
Sbjct: 769 ASGLSAGPGVSSTSAPSNNHDQPIPAIPSLMSSTLTSSISTTSTGMPPASLSTPTP 824
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 44 VFIVLTAVAAIASAQFKCPAKD-GQYEDDRQCDKFFECVDGVATT--KLCPDGLVFDPTI 214
V ++ +A+ C KD G Y D C KF++C DG T ++C D V ++
Sbjct: 12 VLLIACFSVGLANDDDFCKEKDAGHYTDPADCAKFYQC-DGFHRTFHRMCSD--VPKWSV 68
Query: 215 RKINKCDQPFNVD 253
K + CD NVD
Sbjct: 69 MK-STCDHAKNVD 80
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 180 SLVVATPSTHSKNLSHCLSSSYWPSL 103
S+ T ST N SH SSS+WPS+
Sbjct: 259 SVTSVTQSTEGNNKSHATSSSFWPSV 284
>SB_30324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.5 bits (68), Expect = 0.88
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Frame = -2
Query: 641 QPKFTGARHRFKALRRNRCKSVGGWGNLGLSERICPWG----------INQLLFWALESR 492
QP G+ HR + GWGN G+++ WG N+ +FW S
Sbjct: 244 QPLACGSYHRLPDDDSILASNCAGWGNYGVTDWPGKWGYHKHKEEFRVYNEPIFWKTNSS 303
Query: 491 PLFFFVVRCILVCPAESGQTQVPE 420
++ ++ L+C + T+ E
Sbjct: 304 KIYVNLMPSSLLCDEPNNYTEYSE 327
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 71 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 205
++A + C + DG + D + CV GV C DGLV++
Sbjct: 164 SLAILESYCKSPDGMFADPYNEAGYIHCVSGVGKRVNCGDGLVWE 208
>SB_5902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 31.5 bits (68), Expect = 0.88
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 218 KINKCDQPFNVDSAIGLNSSPPSLTHNVPA 307
KINKCD+P D ++ + THN PA
Sbjct: 283 KINKCDEPVTYDVSVKTDDLGIDWTHNFPA 312
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 11 KEYLNKKVIMRVFIVLTAVAAIASAQFKCPAKD-GQYEDDRQCDKFFECVDGVAT-TKLC 184
K +++ + V ++ A A+ C +D G Y D + C K+++C D T + C
Sbjct: 43 KSFMSSDMKSLVLLIACFSVARATEDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTC 102
Query: 185 PDGLVFDPTIRKINKCDQPFNVD 253
D L + ++ I CD +VD
Sbjct: 103 SDQLKWS-AVKNI--CDHAADVD 122
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 530 PKDRFVRLTPSSPNPQRTCNGFYVMP*NGVEP---P*TSAA-KVREKVYNEEEPRNCDCG 697
PK R +SP PQ+T + +YV P G +P P +AA + + + +P+ CG
Sbjct: 219 PKPRVPSSDKASPTPQKTKSDYYVRPVAGPQPVRFPSFAAATQAPSQFQPQPQPQTDSCG 278
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 275 SPPSLTH--NVPAAMDSLPIP-TPLCAISSTTASKVKPPRSSVRPVFIST-STPVPASGP 442
S PSLTH + P+ + P TP + +T S P + P ST STP S P
Sbjct: 447 STPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTP 506
Query: 443 IPPGRQG 463
PG G
Sbjct: 507 SAPGTPG 513
Score = 28.3 bits (60), Expect = 8.2
Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIP-TPLCAISSTTASKVKPPRSSVRPVFIST-STPVPASGPIP 448
S PS T + P+ + P TP + +T S P + P ST STP S PI
Sbjct: 106 STPS-TPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPIT 164
Query: 449 PGRQGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRT 583
PG + P R TPS+P+ T
Sbjct: 165 PGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPST 209
>SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAIS--STTASKVKPPRSSVRPVFISTSTPVPASGPIP 448
S P+ N P +P+P+P C I+ P R ST T PA P P
Sbjct: 664 STPNCLENAP-----IPVPSPGCKIAPYGCCPDNTSPARGPNNEGCPST-TSTPAPAPAP 717
Query: 449 PGRQGCNEQQKKTK 490
+ C +QQ + +
Sbjct: 718 AVQSACLQQQSRAR 731
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 DSAIGLNSSPPSLTHNVPAAMDSLPI----PTPLCAISSTTASKVKPPRSSVRPVFISTS 418
+SA+ L S P SLT P P+ P PL A PPR RP+ +
Sbjct: 827 ESAVEL-SRPDSLTMEAPTTKTDRPLSPSAPPPLPP-RPVGAPPSLPPRPRTRPLPPKSD 884
Query: 419 TPVPASGPIPPGRQGCNEQQKKTKDGFRVP 508
TP P P Q + + + KDG + P
Sbjct: 885 TPPPPPRPAADESQEMS-RTRGPKDGRKPP 913
>SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVK 376
SPPS + + P A L +PTP + TT K K
Sbjct: 99 SPPSSSPSTPFARSKLALPTPPYSTPRTTGPKAK 132
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/82 (25%), Positives = 30/82 (36%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGR 457
PP++ + P LP P P + PP+ P P P P PPG
Sbjct: 1238 PPAMPPDGPPKFMGLPPPPP--------GMRPMPPQPPFMPPPPRMQPPGPPGPPGPPGP 1289
Query: 458 QGCNEQQKKTKDGFRVPKRAAG 523
Q N+++ + D R G
Sbjct: 1290 QPSNKREHEDDDASNKKSRVEG 1311
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 323 PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGRQGC 466
P P PL I ++ S V PP P +S + P+P P PP GC
Sbjct: 678 PPPPPLPVIEGSSLS-VPPPPPPPPPPLLSGTLPMPPPPPPPP--PGC 722
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 214 QEDQQMRP---ALQRRLGDRTELQPPKPNSQCP 303
+E +Q RP L R+ D TE PP+PN+ P
Sbjct: 243 EEQEQPRPRKSVLPARVADGTEATPPRPNTSPP 275
>SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 225 LIFLIVGSNTRPSGQSLVVATPSTHSKNLSHCLSSSYWPSLAGHLNWALAIAATAVNTM 49
L L GS+ SL+VA L++C+ S+ + L L W LA A N++
Sbjct: 487 LTLLAAGSSVPDVMSSLIVAKHGMGDMALANCIGSNIFDVLCLGLPWLLATTAVHPNSV 545
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 286 PNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDE 417
P CP G ++P P C + C +G + VKC +G + DE
Sbjct: 250 PGFYCP---GGDSNPTPYPCTKGHYCPKGTSAPVKCPSGSYQDE 290
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 277 PPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYS 423
P NS+ P+ + P C Y C G+ TE KC G++ EYS
Sbjct: 1412 PSMTNSEYPKNST--EKPMCRRCQTGYYC-PGDGTETKCALGVNTTEYS 1457
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 CPAKDGQYEDDRQCDKFFECVDGVATTKL--CPDGLVFDPTIRKINKCD 235
C K + D + C K++ C DG +L CP G +++ +K ++ D
Sbjct: 1492 CVDKCHDFADPKDCSKYYHC-DGYDDGRLRSCPTGQLWNHVNKKCDRAD 1539
>SB_12656| Best HMM Match : CS (HMM E-Value=0.0018)
Length = 277
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 254 SAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPA 433
S + S PPS ++P + P P + +T+ PP + P F +P+PA
Sbjct: 131 SPLPATSIPPSRYIHLPFPIHPSPFPLHPSPLPATSI----PPSRYIHPPFPLHPSPLPA 186
Query: 434 SGPIPPGR 457
+ IPP R
Sbjct: 187 TS-IPPSR 193
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = +2
Query: 248 VDSAIGLNSSPPSLTHNVPAAMDSLPIP---TPLCAISSTTASKVKPPRSSVRPVFISTS 418
V S+ L SSP + +DS+ IP + IS T + VRP+F +
Sbjct: 16 VSSSSFLQSSPSKAPEQILGVLDSIRIPRSGNSIVPISQVTQPVRAAATAPVRPIFTAHM 75
Query: 419 TPVPA---SGPIPPG 454
+P A S PI G
Sbjct: 76 SPAEADKLSAPILNG 90
>SB_51167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 214 QEDQQMRP---ALQRRLGDRTELQPPKPNSQCP 303
+E +Q RP L R+ D TE PP+PN+ P
Sbjct: 3 EEQEQPRPRKSVLPARVADGTEATPPRPNTSPP 35
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = +2
Query: 248 VDSAIGLNSSPPSLTHNVPAAMDSLPIP---TPLCAISSTTASKVKPPRSSVRPVFISTS 418
V S+ L SSP + +DS+ IP + IS T + VRP+F +
Sbjct: 1563 VSSSSFLQSSPSKAPEQILGVLDSIRIPRSGNSIVPISQVTQPVRAAATAPVRPIFTAHM 1622
Query: 419 TPVPA---SGPIPPG 454
+P A S PI G
Sbjct: 1623 SPAEADKLSAPILNG 1637
>SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 262 RTELQPPKPNSQCPRRNGFFAHPDP 336
RT PPKP + P NG HP P
Sbjct: 87 RTRAFPPKPFAVIPHPNGTVVHPHP 111
>SB_21829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 191 GLVFDPTIRKINKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIP 331
GL F +I KINKC+ P V ++G+ + + H+ P +PIP
Sbjct: 68 GLNFKFSI-KINKCESPLTVGVSVGVPNLGINFGHDFPTD-QLVPIP 112
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 206 PTIRKINK--CDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCA-ISSTTASKVK 376
P K+N P V + + +++SP D+ P PTP+ A +++ T+
Sbjct: 106 PVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADASPNPTPVTAKVNADTSPTPT 165
Query: 377 PPRSSVRPVFISTSTPVPA 433
P + V T TPV A
Sbjct: 166 PVTAKVNVDASPTPTPVTA 184
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSL-----PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGP 442
P L H++P D + P+P P A S A PP P P P G
Sbjct: 270 PDVLEHDIPEVPDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGG 329
Query: 443 IPP 451
PP
Sbjct: 330 APP 332
>SB_11279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 412 DEYSGTCVWPDSAGQTRMQRTTKKNKGRLSSAQKSSWLMPQGQIR 546
D Y + V PD + R + KN S +K W++P+ Q++
Sbjct: 13 DPYMRSYVLPDKSKSNRRRTDIAKNTLSPSFDEKFEWMIPEAQLK 57
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 495 AFECPKEQLVDAPRTDSFA 551
+ ECPKE +D P+ D F+
Sbjct: 377 SIECPKENCIDVPKEDKFS 395
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 451
PP++ A + P + A SS + VK P SV TPV A P PP
Sbjct: 347 PPAVPTPATAPPPVVAPPPSVFASSSGVPTPVKAPPPSVFASSSGVPTPVAAPPPAPP 404
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/105 (20%), Positives = 34/105 (32%)
Frame = +2
Query: 269 NSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIP 448
N++PP+ T + P T ++TT P +T+TP + P
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTP 125
Query: 449 PGRQGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRT 583
PG + T P + P P++ P T
Sbjct: 126 PGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPAT 170
>SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 468
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 495 AFECPKEQLVDAPRTDSFA 551
+ ECPKE +D P+ D F+
Sbjct: 333 SIECPKENCIDVPKEDKFS 351
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 323 PIPTPLCAISSTTASKVKPPRSSVRPVFISTST----PVPASGPIPP 451
P TP+ STT K P + ++P +TST P P++ PI P
Sbjct: 1310 PSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIKPSPSTTPIKP 1356
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 266 LNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKV 373
L+ SP H +PA S +PT C TT S V
Sbjct: 915 LHPSPTDTDHALPALNPSNTVPTNCCPSGETTPSAV 950
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSS-VRPVFISTSTPVPASGPIPP 451
PP N P M S P P P ++ +S+ +PP + V P S P+P + PP
Sbjct: 883 PPGNQVNPP--MSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPLPGNQVNPP 939
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 LNSSPPSLTHN-VPAAMDSLPIPTPLCAISSTTASKVKPPRSS-VRPVFISTSTPVPASG 439
++S P L N V M S P P P ++ +S+ +PP + V P S P P +
Sbjct: 924 MSSQPQPLPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQ 983
Query: 440 PIPP 451
PP
Sbjct: 984 VNPP 987
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 266 LNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRS 388
LN+ PP H P +D LP P L +++ P+S
Sbjct: 186 LNTLPPVPAHRPPQPVDVLPPPPKLAKTKPVPPPRLQVPKS 226
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 260 IGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVP--- 430
+G+ +PP + PAA P P+ T S + PP PV +TS P P
Sbjct: 301 LGVGEAPPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPP-----PVPSATSAPPPWAT 355
Query: 431 -ASGPIP 448
SGP P
Sbjct: 356 SNSGPKP 362
>SB_31280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 449 PGRQGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRL-TPSSP 568
PG++G ++ T FR P+R G ++ F++L P+SP
Sbjct: 9 PGQRGDRKRDYCTSSHFRSPRRPGGDRKREYFLQLPVPASP 49
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 232 RPALQRRLGDRTELQPPKPNSQCPRRNG 315
+PA Q +G + PP+P Q P R G
Sbjct: 301 KPAQQTHIGQMVQTPPPRPQPQRPPRAG 328
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +1
Query: 490 GRLSSAQKSSWLMPQGQIRSLNPKFPQPPTDLQRFLRNALKRCRAPVNFGCQSSGE 657
G + +SW + +P + P D R N+LK A NFGC S +
Sbjct: 182 GNAKDSLATSWTITPSNATKTSPSIEKFPKDSNRKTENSLK---ASDNFGCFSDSD 234
>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
Length = 419
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 302 PAAMDSLPIPTPLCAISSTTASKVKPPRSSVR--PVFISTSTPVPASGPIPPGRQ 460
P D PTP S+ +S PPR S + P S S P PP RQ
Sbjct: 340 PRQSDKQSPPTPSRGQSNKQSSPTPPPRQSDKQSPPIPSRGQSNKQSSPTPPPRQ 394
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 290 THNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSV-RPVFISTSTPVPASGPIPPGRQGC 466
T + P M ++ + T + +S A+ + P S+ +PV +S ST PAS P P
Sbjct: 553 TISSPLPMTTVFVTTTVAPLSP--AAPLTPDTVSITKPVLVSASTD-PASAPAAPTADEK 609
Query: 467 NEQQKK 484
+++KK
Sbjct: 610 EKEEKK 615
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,623,839
Number of Sequences: 59808
Number of extensions: 727303
Number of successful extensions: 2696
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 2228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2643
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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