Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30614
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   6.3  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   8.3  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.3  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 612 CRSCHPGMNGPVGWGF 659
           CR CHP      G+GF
Sbjct: 636 CRKCHPRCKKCTGYGF 651


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 609 RCRSCHPGMNGPVG 650
           RC  C PGM G  G
Sbjct: 579 RCTDCRPGMKGDKG 592


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 197 RVFGWLSSPILAYRNLSITFLTSMNTNININRLTTCY 87
           R F  L   +L +R  S+T L  +   +NI +L  CY
Sbjct: 72  RQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKL--CY 106


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -1

Query: 344 RRRVTRKLEKCIRVISWL-----PYNLATFYIAYLPNNVHRKTSVTL 219
           R R+T+   KC+  I W+        +A F   Y P + H + +V +
Sbjct: 244 RPRITKTCSKCLIGIVWIIALITAVPIAIFSTLYFPTDWHVQCNVPI 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,946
Number of Sequences: 2352
Number of extensions: 19491
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)