Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30611
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 8e-21
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 54 2e-07
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 54 2e-07
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 53 3e-07
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 48 6e-06
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 46 3e-05
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 46 3e-05
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 44 2e-04
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 43 3e-04
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 36 0.048
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 31 1.0
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 31 1.0
SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26) 31 1.4
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 30 2.4
SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59) 29 3.2
SB_31743| Best HMM Match : IncA (HMM E-Value=1.4) 29 4.2
SB_20223| Best HMM Match : IncA (HMM E-Value=1.4) 29 4.2
SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3) 29 4.2
SB_47226| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 29 4.2
SB_17511| Best HMM Match : Flagellin_IN (HMM E-Value=5.6) 29 4.2
SB_5262| Best HMM Match : IncA (HMM E-Value=2.1) 29 4.2
SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1) 29 5.5
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_45370| Best HMM Match : Flagellin_IN (HMM E-Value=6.9) 29 5.5
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 29 5.5
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_19157| Best HMM Match : FLO_LFY (HMM E-Value=0.27) 29 5.5
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 28 7.3
SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34) 28 7.3
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_14945| Best HMM Match : Herpes_US9 (HMM E-Value=1.7) 28 9.7
SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_2468| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 9.7
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 97.9 bits (233), Expect = 8e-21
Identities = 60/170 (35%), Positives = 83/170 (48%)
Frame = +1
Query: 238 P*QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKEXXXXXXXXXXPMDLFDMXXX 417
P + P+EG++FKQISQAYEVLS+ KR+IYD+GGE A+K PMD+FDM
Sbjct: 94 PDKNPDEGDRFKQISQAYEVLSDEKKRKIYDEGGEDAIK-GGGEGGGFHSPMDIFDM--F 150
Query: 418 XXXXXXXXXXXXXXXDVIHQLSVTLEELYCAQSEN*RFKXXXXXXXXXXXXXXXXQFKLV 597
D++HQL VTLEELY + + +
Sbjct: 151 FGTGRAAHQGERRGKDMVHQLRVTLEELYNGATRQLALQKNVICSKCDGRGGKEGCVESC 210
Query: 598 QCAVALVCKYKFQQLGPGMIQQIQTVCCECPWTKKRL*IPKRPFAKVCEG 747
Q + ++ PGM+QQIQTVC +C ++ IP++ K C G
Sbjct: 211 QTCHGSGMYVRINRIAPGMVQQIQTVCRDCGGKGEK--IPEKDRCKNCHG 258
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = +2
Query: 137 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP 253
MVKET YYDIL V P T E HPDKNP
Sbjct: 60 MVKETAYYDILNVPPTATATEIKKSYRKLALKYHPDKNP 98
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1
Query: 238 P*QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKE 357
P + P+ GEKFK I+ AYE+LS+P+KR +YD+ GE+ L+E
Sbjct: 34 PDKNPDTGEKFKDITFAYEILSDPEKRELYDRYGEKGLRE 73
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 146 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP 253
+T YD+LGV N + ++ HPDKNP
Sbjct: 3 DTRLYDLLGVPQNASDNDIKKAYRKLAKELHPDKNP 38
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 622 KYKFQQLGPGMIQQIQTVCCEC 687
K + +GPGM+QQ+Q++C +C
Sbjct: 147 KVTIKPIGPGMVQQMQSMCHDC 168
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1
Query: 238 P*QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKE 357
P + P+ GEKFK I+ AYE+LS+P+KR +YD+ GE+ L+E
Sbjct: 34 PDKNPDTGEKFKDITFAYEILSDPEKRELYDRYGEKGLRE 73
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 146 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP 253
+T YD+LGV N + ++ HPDKNP
Sbjct: 3 DTRLYDLLGVPQNASDNDIKKAYRKLAKELHPDKNP 38
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 244 QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 354
+ P EKFK+IS+AYEVLS+P K+ IYDQ GE+ LK
Sbjct: 37 KSPGAEEKFKEISEAYEVLSDPKKKEIYDQYGEEGLK 73
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +1
Query: 244 QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 354
++P EKFK+I++AYEVLS+P KR I+DQ GE+ LK
Sbjct: 37 KDPGAEEKFKEIAEAYEVLSDPQKREIFDQYGEEGLK 73
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 155 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN 250
YYDILGVK + + E HPDKN
Sbjct: 5 YYDILGVKKDASDQELKKAYKKQAFKYHPDKN 36
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 244 QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 354
QEP+ KF+Q ++AY+VLS+P KR IY+Q GE+ LK
Sbjct: 37 QEPSAEVKFRQAAEAYDVLSDPKKRAIYNQFGEEGLK 73
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 247 EPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKEXXXXXXXXXXPMDL--FDMXXXX 420
+P EKF I AYEVL++ D+R+IYDQ GE+ LK F
Sbjct: 60 DPKAQEKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGHRDHSDPFSSFFGGFGFHFDG 119
Query: 421 XXXXXXXXXXXXXXDVIHQLSVTLEELY 504
D+ L VTLEELY
Sbjct: 120 HNGHSHSQQVPRGSDLTVDLEVTLEELY 147
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQGGEQALK 354
EKF+++++AYEVLS+ +KRR YDQ GE+ LK
Sbjct: 65 EKFREVAEAYEVLSDENKRRQYDQFGEEGLK 95
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +1
Query: 238 P*QEPNEG--EKFKQISQAYEVLSNPDKRRIYDQGGEQALK 354
P + N G EKFK+IS+AY+VL++P +R I+D GE+ LK
Sbjct: 33 PDKNKNSGAEEKFKEISEAYKVLTDPRQRDIFDMYGEEGLK 73
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 155 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN 250
YY ILGV N + D+ HPDKN
Sbjct: 5 YYAILGVPRNASDDDIKKAYRRQALIFHPDKN 36
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQGGEQAL 351
EKFK++S+AYEVLS+ +KR IYD+ G++ L
Sbjct: 45 EKFKKLSEAYEVLSDKEKRDIYDKYGKEGL 74
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 155 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP 253
YY++LGV + + ++ HPDKNP
Sbjct: 5 YYEVLGVPRSASEEDVKKAYRRQALRWHPDKNP 37
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +1
Query: 244 QEPNEGEKFKQISQAYEVLSNPDKRRIYDQGGE 342
++ + EKF+++S+AYEVLS+ KR+ YD G+
Sbjct: 92 KDKSASEKFQEVSEAYEVLSDDGKRKAYDSFGQ 124
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 155 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN 250
YY ILGV PN E HPD N
Sbjct: 60 YYKILGVPPNANQKEIKKAYFELAKKYHPDTN 91
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 146 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN 250
E+ YY++LGV+ N TTD+ HPDKN
Sbjct: 2 ESNYYEVLGVERNATTDDIRRAYRRLALKYHPDKN 36
Score = 32.7 bits (71), Expect = 0.34
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQ 333
E FK++S+AYEVL +P +R +D+
Sbjct: 41 ENFKEVSEAYEVLCDPQQRERFDK 64
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 268 FKQISQAYEVLSNPDKRRIYDQGGEQALK 354
F++I QAY+VLS+P +R YD+ EQ L+
Sbjct: 47 FREIQQAYDVLSDPQERAFYDKHREQILR 75
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 35.5 bits (78), Expect = 0.048
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQG 336
++FK++++AY +LS+P K+R YD G
Sbjct: 204 KQFKEVNEAYSILSDPKKKRRYDSG 228
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 35.5 bits (78), Expect = 0.048
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQG 336
++FK++++AY +LS+P K+R YD G
Sbjct: 204 KQFKEVNEAYSILSDPKKKRRYDSG 228
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 265 KFKQISQAYEVLSNPDKRRIYDQGGE 342
KF+ +S++Y +LS+ +KR IYD+ GE
Sbjct: 58 KFQALSKSYCILSDKEKRAIYDESGE 83
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQG 336
E F++I++AY VL N + R+ YD+G
Sbjct: 112 EVFQEIAEAYSVLGNLESRKQYDRG 136
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 262 EKFKQISQAYEVLSNPDKRRIYDQG 336
E F++I++AY VL N + R+ YD+G
Sbjct: 112 EVFQEIAEAYSVLGNLESRKQYDRG 136
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 155 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPMRVRNLNRYLRPMRCSRILT 313
YYD LGV + T E HPDKNP + + + + +LT
Sbjct: 8 YYDTLGVHKDSTEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLT 60
>SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26)
Length = 680
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 233 ILELIFDRLSLIHQWCNLVSRPKCHN 156
+++L F RLSL+ W N + + KC++
Sbjct: 219 VVDLYFSRLSLLESWKNFILQSKCYH 244
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 128 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPD 244
++K ++ YY ILG+K NC E HPD
Sbjct: 200 LLKQSQKRDYYKILGLKRNCNKREITKAYRKLAVKWHPD 238
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 244 QEPNEGEK-FKQISQAYEVLSNPDKRRIYDQG 336
++ + EK F I+ A EVL++P+KR YD G
Sbjct: 243 EDKKKAEKMFIDIAAAKEVLTDPEKRAKYDAG 274
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 29.9 bits (64), Expect = 2.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 379 IHHHYHPLPLMLVHHLDH 326
+HHH+HPL + ++H H
Sbjct: 154 VHHHHHPLSIAIIHRHRH 171
>SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59)
Length = 483
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYIFCDIVDRTKCFALGEPSNVLACL 99
>SB_31743| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYVFCDIVDRTKCFALDEPSNVLACL 99
>SB_20223| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 400
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 134 LEVTLSKIEAIYVFCDIVDRTKCFALDEPSNVLACL 169
>SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3)
Length = 615
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -3
Query: 242 QGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
+GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 560 EGGPLKMALTKIEALYICCDIVDRTQCLSLGEPSNVLACL 599
>SB_47226| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYIYCDIVDRTKCFALDEPSNVLACL 99
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 253 NEGEKFKQISQAYEVLSNPDKRRIYD 330
N +KF+ I+ AYE L +P++R YD
Sbjct: 78 NAIKKFQLIATAYETLKDPEQRNDYD 103
>SB_17511| Best HMM Match : Flagellin_IN (HMM E-Value=5.6)
Length = 265
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 102 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSTVLACL 137
>SB_5262| Best HMM Match : IncA (HMM E-Value=2.1)
Length = 597
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -3
Query: 242 QGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
+GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 280 EGGPLKMALTKIEALYICCDIVDRTQCLSLGEPSNVLACL 319
>SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1)
Length = 409
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 133 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSNVLACL 168
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 239 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 163 GGALKVALPKIEALYICCDIVDRTQCLSLGEPSNVLACL 201
>SB_45370| Best HMM Match : Flagellin_IN (HMM E-Value=6.9)
Length = 226
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 133 LEVTLSKMEAIYIFCDIVDRKKCFALDEPSNVLACL 168
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 379 IHHHYHPLPLMLVHHLDHKFAFCQDSRAPHRPEISV*ISHP 257
IHHH+HP +++ H H + H P S+ I HP
Sbjct: 152 IHHHHHPSSSIIIIHHHHPSSSSIIIIIHHHPS-SIIIHHP 191
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = -1
Query: 505 STTPPMLLIIDELHLCLCVPCGVYLH*IHLQRTCQRDPLVKKIHHHYHPLP----LMLVH 338
S++ +++II H + +H H + ++ IHHH+HP ++++H
Sbjct: 270 SSSSSIIIIIHHHHHPSSSSSIIIIHHHHHPSSSSSIIIIIIIHHHHHPSSSSSIIIIIH 329
Query: 337 HLDHKFAFCQDSRAPHRPEISV*ISHP 257
H H S H P + HP
Sbjct: 330 H--HHHPSSSSSIIHHHPSSIIIHHHP 354
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 239 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 319 GGALKVALPKIEALYICCDIVDRTQCLSLGEPSNVLACL 357
>SB_19157| Best HMM Match : FLO_LFY (HMM E-Value=0.27)
Length = 560
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 400 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSNVLACL 435
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +1
Query: 244 QEPNEGE-KFKQISQAYEVLSN 306
Q E E KFK+IS+AYEVLS+
Sbjct: 37 QNKEEAERKFKEISEAYEVLSD 58
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +2
Query: 155 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPMRVRNLNR 277
YYDIL V + + + HPDKNP R
Sbjct: 4 YYDILEVPRSASEQDIKKSYRKLALKWHPDKNPQNKEEAER 44
>SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34)
Length = 674
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = -1
Query: 670 FESAVSYPGLAVEICTCIPEPRHTGQV*TAPFLPPRPSHFSQITFF*SVS----FLTVHS 503
F A S P E PR + P +PPRP + + +TF + FL +
Sbjct: 245 FRQAQSTPSTPTEPPRPAEPPRPSPAATAHPVMPPRPQNMTMVTFESILKYDHCFLVLQV 304
Query: 502 TTPPMLLIIDE 470
PP + D+
Sbjct: 305 PPPPATEVADD 315
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 268 FKQISQAYEVLSNPDKRRIY 327
F ++ +AYEVLS+P+ + IY
Sbjct: 202 FSKVQKAYEVLSDPETKAIY 221
>SB_14945| Best HMM Match : Herpes_US9 (HMM E-Value=1.7)
Length = 292
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC P L CL
Sbjct: 139 LEVTLSKIEAIYIFCDIVDRTKCFAFDEPSNVLACL 174
>SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 239 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
GG L++ ++ ++ +C++V R +C + P L CL
Sbjct: 130 GGALKVTLPKIEALYIFCDIVDRSQCLALDEPSNVLACL 168
>SB_2468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 654 HTRA*LLKFVLAYQSHGTLDKFELHPFYHHVPHISHRSRSF 532
H+R+ ++ VLA + G +D F + F+ + + HRSRSF
Sbjct: 142 HSRSFVVNLVLA-EFKGCID-FRRYCFHRGIEYCQHRSRSF 180
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 230 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 123
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 8 LEVTLPKIEAIYVFCDIVDRSKCLALDEPSNVLACL 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,119,230
Number of Sequences: 59808
Number of extensions: 443442
Number of successful extensions: 1204
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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