Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30610
         (432 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3Q1 Cluster: Putative uncharacterized protein PFE106...    35   0.64 
UniRef50_Q6LEZ5 Cluster: Putative uncharacterized protein; n=3; ...    33   3.4  
UniRef50_Q7N2V1 Cluster: Similar to unknown protein of Photorhab...    32   5.9  

>UniRef50_Q8I3Q1 Cluster: Putative uncharacterized protein PFE1060c;
           n=5; Plasmodium|Rep: Putative uncharacterized protein
           PFE1060c - Plasmodium falciparum (isolate 3D7)
          Length = 1526

 Score = 35.1 bits (77), Expect = 0.64
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +1

Query: 112 EFLLKNNR*KYILLQTYLSSKY*FHCLRLCYFYYCFINTAHDK*MTECHRILMLL 276
           E L  N++ + +    Y   K  FH L   YFY+C IN  +D  +T+    L+L+
Sbjct: 129 EILRANDKKRLLKTYIYELKKNNFHILENLYFYFCNINNYYDYALTKMFHSLLLV 183


>UniRef50_Q6LEZ5 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 310

 Score = 32.7 bits (71), Expect = 3.4
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = +1

Query: 145 ILLQTYLSSKY*FHCLRLCYFYYCFINTAHDK*MTECHRILMLLETCRIFFLILKE 312
           I+L+T+  S Y   C+ + + Y  FINT   K +T  +++L+LL+   +F L +KE
Sbjct: 228 IILETHNVSVY--ICIHI-FNYKPFINTYSFKIVTPTNKVLILLKNKTVFILTIKE 280


>UniRef50_Q7N2V1 Cluster: Similar to unknown protein of
           Photorhabdus; n=1; Photorhabdus luminescens subsp.
           laumondii|Rep: Similar to unknown protein of
           Photorhabdus - Photorhabdus luminescens subsp. laumondii
          Length = 139

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 416 IICTII*LCF-SLMHILTVVER*YIFKCSYFVIYYISLRIKKNIRQV 279
           II TII +C+ S  H      R   F C   VI+YI L+IK+N +Q+
Sbjct: 97  IILTIICICYKSFYHRY----RYNFFTCIKLVIFYIRLKIKENFKQL 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,409,690
Number of Sequences: 1657284
Number of extensions: 5139185
Number of successful extensions: 8484
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8481
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)