Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30610
         (432 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D31762-1|BAA06540.2|  384|Homo sapiens KIAA0057 protein.               29   6.8  
BC028121-1|AAH28121.1|  370|Homo sapiens translocation associate...    29   6.8  
AL049611-2|CAB71119.1|  370|Homo sapiens translocation associate...    29   6.8  

>D31762-1|BAA06540.2|  384|Homo sapiens KIAA0057 protein.
          Length = 384

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 85  CVFLKGFIAEFLLKNNR*KYILLQTYLSSKY*FHCLRLCYF 207
           C++L      +LL  +R   ILL    S+++ FH  RL YF
Sbjct: 210 CLYLVHIAGAYLLNLSRLGLILLLLQYSTEFLFHTARLFYF 250


>BC028121-1|AAH28121.1|  370|Homo sapiens translocation associated
           membrane protein 2 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 85  CVFLKGFIAEFLLKNNR*KYILLQTYLSSKY*FHCLRLCYF 207
           C++L      +LL  +R   ILL    S+++ FH  RL YF
Sbjct: 196 CLYLVHIAGAYLLNLSRLGLILLLLQYSTEFLFHTARLFYF 236


>AL049611-2|CAB71119.1|  370|Homo sapiens translocation associated
           membrane protein 2 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 85  CVFLKGFIAEFLLKNNR*KYILLQTYLSSKY*FHCLRLCYF 207
           C++L      +LL  +R   ILL    S+++ FH  RL YF
Sbjct: 196 CLYLVHIAGAYLLNLSRLGLILLLLQYSTEFLFHTARLFYF 236


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,579,574
Number of Sequences: 237096
Number of extensions: 679319
Number of successful extensions: 554
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)