Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30609
(805 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 7e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 7e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 7e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 7e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 7e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 6e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 80 2e-15
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 68 8e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 7e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 2e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 1e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.089
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 33 0.36
SB_10490| Best HMM Match : Toxin_27 (HMM E-Value=6.4) 32 0.63
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_48886| Best HMM Match : 4F5 (HMM E-Value=0.037) 31 0.83
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.83
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.83
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_22758| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 4.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_54250| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 4.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.4
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.8
SB_54275| Best HMM Match : Galactosyl_T (HMM E-Value=2.4e-20) 28 7.7
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 7.7
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 7.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 7.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 7.7
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 7.7
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (448), Expect = 7e-47
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 147
Score = 109 bits (263), Expect = 2e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (448), Expect = 7e-47
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 146
Score = 107 bits (256), Expect = 1e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (448), Expect = 7e-47
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 146
Score = 108 bits (259), Expect = 6e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (448), Expect = 7e-47
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 147
Score = 114 bits (274), Expect = 9e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (448), Expect = 7e-47
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 147
Score = 109 bits (263), Expect = 2e-24
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 108 bits (259), Expect = 6e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 365
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 438 NREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
N + + +IMFETFN+PAM +VLSLYASG
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASG 109
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +3
Query: 216 SGRDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 392
S + G + L+VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 393 EHPVLLTEAPLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
VLLTE PLNP NREK+ ++MFE + + +VL+LYA G
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQG 150
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +3
Query: 345 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLY 524
K+W H F ++LRV E+ PVLLTEAPLNPK NRE++ Q+MFE+FN P M +V++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 525 ASG 533
ASG
Sbjct: 2189 ASG 2191
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 68.1 bits (159), Expect = 8e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +3
Query: 393 EHPVLLTEAPLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
+HPVLLTEAPLNP+ NREK ++ FETFN PA+ +VLSLYA+G
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATG 172
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = +3
Query: 303 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKVTQIMFETFNT 482
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 483 PAM*RRHPSVLSLYASG 533
PA SVL+ +A+G
Sbjct: 63 PAFFLCKNSVLTAFANG 79
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 219 GRDGRYGTEGL--LVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 392
GR + G E L +GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 393 EHPVLL 410
+H LL
Sbjct: 331 DHYFLL 336
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 88 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 234
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 216 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 100
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 219 GRDGRYGTEGLLVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 389
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 390 EEHPVLLTEAPLNPKANRE 446
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.7 bits (76), Expect = 0.089
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 374
L +GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 459 IMFETFNTPAM*RRHPSVLSLYASG 533
IMFE FN+PA+ +VLSLYASG
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASG 25
>SB_10490| Best HMM Match : Toxin_27 (HMM E-Value=6.4)
Length = 211
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 532 PDAYSESTLGWRRYMAGVLNVSNMIWVTFSLLALGLRGASVSRTGCS 392
PD ++ RR++A V+ ++ + +VTF L + RG VS + S
Sbjct: 117 PDPQNDKVFFIRRFLASVIRINGIAFVTFCLASALRRGIPVSESSFS 163
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 573 LPKPWPSTKGYAISPNGQFLRSGTLAGSGNLNRIYLPWKDSSTRNSRLNSFQINQT--AG 746
L + W + ++ PNG +S L +G +NRI + D++T N T +
Sbjct: 229 LGQAWSTLSDFSQEPNGNAGKSIELVLNGTMNRINVQTIDANTFNGTTGQTSNGATVRSN 288
Query: 747 TGENPSWDNSK 779
T ++P++ N++
Sbjct: 289 TDQDPNYANTR 299
>SB_48886| Best HMM Match : 4F5 (HMM E-Value=0.037)
Length = 476
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 573 LPKPWPSTKGYAISPNGQFLRSGTLAGSGNLNRIYLPWKDSSTRNSRLNSFQINQT--AG 746
L + W + ++ PNG +S L +G +NRI + D++T N T +
Sbjct: 75 LGQAWSTLSDFSQEPNGNAGKSIELVLNGTMNRINVQTIDANTFNGTTGQTSNGATVRSN 134
Query: 747 TGENPSWDNSK 779
T ++P++ N++
Sbjct: 135 TDQDPNYANTR 145
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_22758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 494 TSPSKRALAVRVRSVPPVSCWTSGNVSSKTVAIYEGLRNFPQRPILEVWDFSRV 655
TS SK V+ R +P S T+ + SK + NFPQ+P + W S+V
Sbjct: 245 TSVSKLESVVQSR-IPFTSASTNVPLGSKGTTLATSSCNFPQQPFSKSWGSSQV 297
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 597 KGYAISPNGQFLRSGTLAGSGNLNRIYLPWKDSSTRNSRLNSFQINQTAGTGENP-SWDN 773
K + G SG L G GN+N+ L +D ST + N + T NP S DN
Sbjct: 188 KNNTTANEGDINASGDLNGEGNINKANLTEQDESTSTIKAN----EENTQTNSNPTSADN 243
Query: 774 S 776
+
Sbjct: 244 N 244
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_54250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 542 PVSCWTSGNVSSKTVAIYEGLRNFPQRPILEVWDFSR 652
PV WT G SK++ I L P R +L WD +
Sbjct: 75 PVLVWTEGLNVSKSIRIQTNLCRRPLRFLLNPWDIHK 111
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 148
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_54275| Best HMM Match : Galactosyl_T (HMM E-Value=2.4e-20)
Length = 767
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 573 LPKPWPSTKGYAISPNG------QFLRSGTLAGSGNLNRIYLPWKDSSTRNSRLNSFQIN 734
L K W ++ PNG + + +GT+A + +NRI + D++T N
Sbjct: 635 LGKAWSILADFSQEPNGNAGKSIELVSNGTMAQNVTMNRINVQTIDANTFNGTTGQTSNG 694
Query: 735 QT--AGTGENPSWDNSK 779
T + T + P++ N++
Sbjct: 695 ATVRSNTEQEPNYTNTR 711
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 397 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PTKSPSVPYRPS 224
CS + + C + ++V CS + V + ++C+ P + PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 223 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 131
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,230,973
Number of Sequences: 59808
Number of extensions: 738093
Number of successful extensions: 2200
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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