Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30609
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 5e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 6e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 6e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 3e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 3e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 181 6e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 181 6e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 181 6e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 1e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 8e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 154 6e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 1e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 89 3e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 85 7e-17
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 3e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 61 7e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 54 8e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.13
At1g78560.1 68414.m09156 bile acid:sodium symporter family prote... 31 0.68
At1g16690.2 68414.m01999 transcription factor-related similar to... 31 0.90
At1g16690.1 68414.m01998 transcription factor-related similar to... 31 0.90
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 31 1.2
At1g11480.1 68414.m01319 eukaryotic translation initiation facto... 31 1.2
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 29 3.6
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 29 4.8
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 29 4.8
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 6.3
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 8.3
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 28 8.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 5e-47
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFNTPAM +VLSLYASG
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 148
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 6e-47
Identities = 86/99 (86%), Positives = 89/99 (89%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFNTPAM +VLSLYASG
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 148
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 6e-47
Identities = 86/99 (86%), Positives = 89/99 (89%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFNTPAM +VLSLYASG
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 148
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 85/99 (85%), Positives = 89/99 (89%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN PAM +VLSLYASG
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG 148
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 84/99 (84%), Positives = 88/99 (88%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN PAM +VLSLYASG
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 148
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 84/99 (84%), Positives = 88/99 (88%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 417 APLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
APLNPKANREK+TQIMFETFN PAM +VLSLYASG
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 148
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 181 bits (440), Expect = 6e-46
Identities = 82/93 (88%), Positives = 88/93 (94%)
Frame = +3
Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434
VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 435 ANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
ANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 148
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 181 bits (440), Expect = 6e-46
Identities = 82/93 (88%), Positives = 88/93 (94%)
Frame = +3
Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434
VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 435 ANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
ANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 148
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 181 bits (440), Expect = 6e-46
Identities = 82/93 (88%), Positives = 88/93 (94%)
Frame = +3
Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434
VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 435 ANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
ANREK+TQIMFETFN+PAM +VLSLYASG
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 148
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 484 PPCNVAIQACSRCTRPVRTTGIVLDFGERV 573
P VAIQA RTTGIVLD G+ V
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (396), Expect = 1e-40
Identities = 72/93 (77%), Positives = 84/93 (90%)
Frame = +3
Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434
VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK
Sbjct: 57 VGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPK 116
Query: 435 ANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
NREK+TQIMFE+F P+M +VLSLY+SG
Sbjct: 117 VNREKMTQIMFESFAFPSMYIGIQAVLSLYSSG 149
Score = 88.2 bits (209), Expect = 6e-18
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDT 55
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (381), Expect = 8e-39
Identities = 70/95 (73%), Positives = 84/95 (88%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428
L VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 429 PKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
PKA+REK+TQIMFETF P+M + LSL+ASG
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASG 103
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 154 bits (374), Expect = 6e-38
Identities = 82/134 (61%), Positives = 94/134 (70%)
Frame = +3
Query: 222 RDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 401
RDG E VG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESY-VGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 402 VLLTEAPLNPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASGPYHRYRAGLRGTCLPK 581
VLLTEAP NPKANREK+TQIMFE+F+ PAM SVL LY+SG L G +
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDL-GERVSH 152
Query: 582 PWPSTKGYAISPNG 623
P +GYA+ P+G
Sbjct: 153 TVPVYEGYAL-PHG 165
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 213
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (248), Expect = 1e-22
Identities = 44/95 (46%), Positives = 63/95 (66%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428
++VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLN
Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Query: 429 PKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
P NREK+ + MFE +N + + +VL+LYA G
Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQG 147
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 89.0 bits (211), Expect = 3e-18
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +3
Query: 255 VGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 425
+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL
Sbjct: 70 IGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPL 129
Query: 426 NPKANREKVTQIMFETFNTPAM*RRHPSVLSLYA 527
P +RE +I+FETFN P + SVL+L A
Sbjct: 130 TPPESREYTGEILFETFNVPGLYIAVNSVLALAA 163
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 115 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 201
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 84.6 bits (200), Expect = 7e-17
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 249 LLVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 425
L VG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL
Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
Query: 426 NPKANREKVTQIMFETFNTPAM*RRHPSVLSLYASG 533
N + REK ++MFE + PA+ VL+ +A+G
Sbjct: 135 NTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATG 170
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 204
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 225 DGRYGTEGLLVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 401
D G L G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 402 VLLTEAPLNPKANREK 449
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 204
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 303 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKVTQIMFETFN 479
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 480 TPAM*RRHPSVLSLYASG 533
+VLSLYA G
Sbjct: 117 VSGFYASEQAVLSLYAVG 134
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 294 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKVTQIMFET 473
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 474 FNTPAM*RRHP-SVLSLY 524
F ++ HP S++ LY
Sbjct: 121 FGFSSLYIAHPQSLVHLY 138
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 303 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKVTQIMFETFN 479
P + +V ++ ME I + F + +HP+L+TE NP +R K+ +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 480 TPAM 491
PA+
Sbjct: 145 VPAV 148
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 239 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 102
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g78560.1 68414.m09156 bile acid:sodium symporter family protein
low similarity to SP|Q12908 Ileal sodium/bile acid
cotransporter {Homo sapiens}; contains Pfam profile
PF01758: Sodium Bile acid symporter family
Length = 401
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 455 PDHVRNIQHARHVTSPSKRALAVRVRSVPPVSC 553
P H+R I +R SPS R ++++ +S P+SC
Sbjct: 28 PLHLRTISCSRLSYSPSSREISLKTQSTVPISC 60
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 429 PKANREKVTQI 461
REK ++
Sbjct: 221 VFRPREKAHRL 231
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 429 PKANREKVTQI 461
REK ++
Sbjct: 221 VFRPREKAHRL 231
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +3
Query: 309 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN-REKVTQIMFETFNTP 485
EHGI +D EK+W F+ + +LL + + P A ++ T ++
Sbjct: 234 EHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLK 293
Query: 486 AM*RRHPSVLS--LYASGPYHRYRAGLRGTCL---PKPWPSTKGYA 608
+ R P + ++ SG A L + P PW + YA
Sbjct: 294 LLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYA 339
>At1g11480.1 68414.m01319 eukaryotic translation initiation
factor-related contains weak similarity to
Swiss-Prot:P23588 eukaryotic translation initiation
factor 4B (eIF-4B) [Homo sapiens]
Length = 578
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 612 SPNGQFLRSGTLAGSGNLNRIYLPWKDSSTRNSRLNSFQINQTAGTGENP 761
SPNG +R G A + L + Y P+ D + NSF ++ T + P
Sbjct: 512 SPNGTGIRHGKAASALELAQAYSPFSDPKSGIGSSNSFNKSRNNQTQQQP 561
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +3
Query: 309 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-NREKVTQIMFETFNTP 485
EH I +D EK+W F+ + +LL + + P A ++++ T +
Sbjct: 233 EHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLK 292
Query: 486 AM*RRHPSVLS--LYASGPYHRYRAGLRGTCL---PKPWPSTKGYA 608
+ R P + ++ SG A L + P PW + YA
Sbjct: 293 LLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYA 338
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 597 KGYAISPNGQFLRSGTLAGSGNLNRI 674
+G +SPNG+ L+ GT G G L +
Sbjct: 297 QGLPLSPNGEGLKKGTKVGEGALREV 322
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 597 KGYAISPNGQFLRSGTLAGSGNLNRI 674
+G +SPNG+ L+ GT G G L +
Sbjct: 297 QGLPLSPNGEGLKKGTKVGEGALREV 322
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 349 IFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTKSPSVP 236
IFS SS+LVT P S+ +R R ++L SS + P
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKP 47
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 234 YGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 371
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
PF02984: Cyclin, C-terminal domain
Length = 1025
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIV 127
H LL +L+ H DH +++ PS S +S + H+ IV
Sbjct: 342 HFLLSMLIKHLDHKSVLKHPSMQLNILEVTSSLSETAKVEHSATIV 387
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,149,218
Number of Sequences: 28952
Number of extensions: 497680
Number of successful extensions: 1404
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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