Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30607
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1ZAJ7 Cluster: CG15615-PA; n=4; Diptera|Rep: CG15615-P...    49   1e-04
UniRef50_A5K8U5 Cluster: Putative uncharacterized protein; n=1; ...    38   0.30 
UniRef50_P40899 Cluster: Sexual differentiation process protein ...    35   2.1  
UniRef50_Q8I2P9 Cluster: Protein kinase, putative; n=1; Plasmodi...    34   2.8  
UniRef50_P49908 Cluster: Selenoprotein P precursor; n=27; Euther...    34   2.8  
UniRef50_Q9I8Z5 Cluster: Odorant receptor 5.1; n=11; Danio rerio...    33   6.4  
UniRef50_UPI0000D5709C Cluster: PREDICTED: hypothetical protein;...    33   8.5  
UniRef50_Q5BWL3 Cluster: SJCHGC04683 protein; n=1; Schistosoma j...    33   8.5  
UniRef50_Q8TP69 Cluster: Predicted protein; n=1; Methanosarcina ...    33   8.5  

>UniRef50_A1ZAJ7 Cluster: CG15615-PA; n=4; Diptera|Rep: CG15615-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 366

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   ISEWFPSPNHHE-HVHESHGWDRSDNNEASSKKVE 103
           ISEWFPSP+HH+ H HE H WDR D    +++  +
Sbjct: 272 ISEWFPSPDHHDHHHHEHHDWDRKDTGVTATRTAD 306


>UniRef50_A5K8U5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 960

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
 Frame = +2

Query: 407 QKHSLLFVRQLMILCLDLSRCSI-----FDLVTVFEADLYVYFKLNIKLCRKKTE-YAFC 568
           QK S L+VR+ ++L L +S+C+I      D +T  + + ++ F ++I L  K+TE Y F 
Sbjct: 588 QKKSELYVRETLLLILSISQCTISHPIYLDNLTKAQKE-FINFGIHIGLFLKRTEDYVFV 646

Query: 569 TPLMLYVLL 595
           TP  L + +
Sbjct: 647 TPYALLLTI 655


>UniRef50_P40899 Cluster: Sexual differentiation process protein
           isp3; n=1; Schizosaccharomyces pombe|Rep: Sexual
           differentiation process protein isp3 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 182

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 11  WFPSP---NHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAPE 148
           W+P P   +H EH    H W+ S ++++S  +    K+ PK    K P+
Sbjct: 46  WYPPPPPRHHKEHKKSHHHWEYSSDDDSSDDEESCEKKKPKCCEKKKPK 94


>UniRef50_Q8I2P9 Cluster: Protein kinase, putative; n=1; Plasmodium
           falciparum 3D7|Rep: Protein kinase, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 1277

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -1

Query: 597 NNKT*SISGVQNAYSVFFLHNLIFNLK*TYKSASNTVTKSKILHLDKSKHNIIN*RTNSK 418
           N+K     G+ N   +FFL N+I      +      + + K++H D  K +  +   N K
Sbjct: 579 NSKVLKELGINNKEHIFFLMNIINTFNSIHNMYLQVLNQEKLMHND-YKSSCAHHSINKK 637

Query: 417 ECFCTKKVKESI 382
           E F  KK  +SI
Sbjct: 638 EVFIIKKFDKSI 649


>UniRef50_P49908 Cluster: Selenoprotein P precursor; n=27;
           Eutheria|Rep: Selenoprotein P precursor - Homo sapiens
           (Human)
          Length = 381

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +      AP H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240


>UniRef50_Q9I8Z5 Cluster: Odorant receptor 5.1; n=11; Danio
           rerio|Rep: Odorant receptor 5.1 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 349

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +2

Query: 482 LVTVFEADLYVYFKLNIKLCRKKTEYAFCTPLMLYVLLFYLGKCFGFVKQLGVEAKP 652
           ++  F A +   F+++    R KT ++ CTP +L + L+Y+ +C  +V  + +   P
Sbjct: 248 IIFSFTAIIISVFRISDTQARFKT-FSTCTPQLLIICLYYVPRCVVYVHDVTIAISP 303


>UniRef50_UPI0000D5709C Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 306

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 35  EHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAPEKSTWQFP 169
           E +H     +R  N+ + + ++E  K+A  H + K PEK   +FP
Sbjct: 259 EDLHRKKSLERKTNSLSMTDQLEQTKKADSHESQKEPEKKKKRFP 303


>UniRef50_Q5BWL3 Cluster: SJCHGC04683 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04683 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 202

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 540 HNLIFNLK*TYKSASNTVTKSKILHLDKSKHN 445
           H L FN + T ++++  V K KI  LDK+ HN
Sbjct: 46  HYLFFNQQDTERNSNKEVVKEKITELDKNSHN 77


>UniRef50_Q8TP69 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 138

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
 Frame = +2

Query: 335 VSFNRCATRTFL---NSYAIDSFTFFVQKHSLLFVRQLMILCLDLSRCSIFDLVTVFEAD 505
           VS NR  +  F    ++YA        +K    +V+  +I+         F  + +    
Sbjct: 4   VSRNRSCSLVFQFIRSNYADAELAGKTKKAKKQYVKSTLIMQASKESLGYFSFLAL---P 60

Query: 506 LYVYFKLNIKLCRKKTEYAFCTPLMLYVLLFYL--GKCFGFV 625
           L + F  +I LCR    + FC  L+LYVLL  L    CF F+
Sbjct: 61  LIILFCFDILLCRSAYCFTFC--LLLYVLLIALCSAYCFNFI 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,439,860
Number of Sequences: 1657284
Number of extensions: 10765230
Number of successful extensions: 28702
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28547
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)