Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30607
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11793-1|CAA77836.1|  381|Homo sapiens selenoprotein P protein.        34   0.41 
DQ022288-1|AAY26400.1|  381|Homo sapiens selenoprotein P, plasma...    34   0.41 
BC040075-1|AAH40075.1|  381|Homo sapiens selenoprotein P, plasma...    34   0.41 
BC015875-1|AAH15875.1|  381|Homo sapiens selenoprotein P, plasma...    34   0.41 
BC058919-1|AAH58919.1|  381|Homo sapiens selenoprotein P, plasma...    33   1.2  
BC046152-1|AAH46152.1|  381|Homo sapiens selenoprotein P, plasma...    33   1.2  

>Z11793-1|CAA77836.1|  381|Homo sapiens selenoprotein P protein.
          Length = 381

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +      AP H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240


>DQ022288-1|AAY26400.1|  381|Homo sapiens selenoprotein P, plasma, 1
           protein.
          Length = 381

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +      AP H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240


>BC040075-1|AAH40075.1|  381|Homo sapiens selenoprotein P, plasma, 1
           protein.
          Length = 381

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +      AP H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240


>BC015875-1|AAH15875.1|  381|Homo sapiens selenoprotein P, plasma, 1
           protein.
          Length = 381

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +      AP H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP 240


>BC058919-1|AAH58919.1|  381|Homo sapiens selenoprotein P, plasma, 1
           protein.
          Length = 381

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +       P H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNTPTHPAP 240


>BC046152-1|AAH46152.1|  381|Homo sapiens selenoprotein P, plasma, 1
           protein.
          Length = 381

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 17  PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAP 136
           PSP++H   H +HG     ++E S  +       P H AP
Sbjct: 201 PSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNTPTHPAP 240


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,238,923
Number of Sequences: 237096
Number of extensions: 1670227
Number of successful extensions: 3286
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3276
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)