Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30607
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p pro...    49   7e-06
AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-P...    49   7e-06
AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown prot...    30   3.4  

>BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p
           protein.
          Length = 363

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   ISEWFPSPNHHE-HVHESHGWDRSDNNEASSKKVE 103
           ISEWFPSP+HH+ H HE H WDR D    +++  +
Sbjct: 269 ISEWFPSPDHHDHHHHEHHDWDRKDTGVTATRTAD 303


>AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-PA
           protein.
          Length = 366

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   ISEWFPSPNHHE-HVHESHGWDRSDNNEASSKKVE 103
           ISEWFPSP+HH+ H HE H WDR D    +++  +
Sbjct: 272 ISEWFPSPDHHDHHHHEHHDWDRKDTGVTATRTAD 306


>AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown
           protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +2

Query: 422 LFVRQLMILCLDLSRCSIFDLVTVFEADL--YVYFKLNIKLCRKKTEYAFCTPLMLYVLL 595
           L ++Q  I  +  +R   F LV +F + +  ++   L +++CR +++ +   P+    L 
Sbjct: 153 LGIQQYSIFTVKFNRLLPF-LVPLFGSYICYFIILLLFVRVCRNRSDDSANQPIRFGSLF 211

Query: 596 FYLGKCFGFV 625
             LG CF F+
Sbjct: 212 LLLGLCFSFI 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,875,988
Number of Sequences: 53049
Number of extensions: 505362
Number of successful extensions: 2320
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2199
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)