Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30607
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 30 1.8
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 30 1.8
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 2.3
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 2.3
Z73969-21|CAI46568.2| 272|Caenorhabditis elegans Hypothetical p... 29 3.1
Z70783-12|CAI46596.2| 272|Caenorhabditis elegans Hypothetical p... 29 3.1
AF125954-1|AAK68174.1| 340|Caenorhabditis elegans Serpentine re... 29 4.1
AF000299-3|AAW88403.1| 342|Caenorhabditis elegans Serpentine re... 29 4.1
AF000299-2|AAC47981.2| 324|Caenorhabditis elegans Serpentine re... 29 4.1
AC006769-2|AAF60583.2| 340|Caenorhabditis elegans Hypothetical ... 29 4.1
AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical ... 28 5.4
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 28 7.1
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 28 7.1
Z92789-2|CAB07219.1| 344|Caenorhabditis elegans Hypothetical pr... 27 9.4
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 27 9.4
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 27 9.4
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 27 9.4
AL132865-12|CAB60601.1| 345|Caenorhabditis elegans Hypothetical... 27 9.4
>Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical
protein C46F11.5b protein.
Length = 489
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 143 ALSVLHVWVPL*SFRLFCL--KLRCYHFYPNHEIRARVRD 30
AL+ H+WVP+ F L C KLRC+ H I VRD
Sbjct: 284 ALAYKHIWVPVKGF-LLCQFEKLRCWLRDTLHRIAISVRD 322
>Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical
protein C46F11.5a protein.
Length = 488
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 143 ALSVLHVWVPL*SFRLFCL--KLRCYHFYPNHEIRARVRD 30
AL+ H+WVP+ F L C KLRC+ H I VRD
Sbjct: 284 ALAYKHIWVPVKGF-LLCQFEKLRCWLRDTLHRIAISVRD 322
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 17 PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAPEKSTWQF 166
P+ +HH S G DR E KK I E K PK P+ S+ ++
Sbjct: 91 PASSHHHGASSSSGKDREKEKE---KKKNKIYEEKKVKTPKPPKSSSSRY 137
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 17 PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAPEKSTWQF 166
P+ +HH S G DR E KK I E K PK P+ S+ ++
Sbjct: 451 PASSHHHGASSSSGKDREKEKE---KKKNKIYEEKKVKTPKPPKSSSSRY 497
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 17 PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAP 121
P P HHEH SH + ++ A SK + TI++ P
Sbjct: 1143 PLPLHHEHPLTSHDSSAASSSTAPSKTI-TIRKGP 1176
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 17 PSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAP 121
P P HHEH SH + ++ A SK + TI++ P
Sbjct: 1143 PLPLHHEHPLTSHDSSAASSSTAPSKTI-TIRKGP 1176
>Z73969-21|CAI46568.2| 272|Caenorhabditis elegans Hypothetical
protein ZK856.14 protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 154 RLFWRFRCYMFGCLFNRFDFFA*SFVVITSIPTMRFVHVFVM 29
++ W ++GCLFN F+ + +F V+ I + + FV+
Sbjct: 131 KMIW-LTMLIYGCLFNSFNPWGMAFSVLNQIHSFNIIDAFVV 171
>Z70783-12|CAI46596.2| 272|Caenorhabditis elegans Hypothetical
protein ZK856.14 protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 154 RLFWRFRCYMFGCLFNRFDFFA*SFVVITSIPTMRFVHVFVM 29
++ W ++GCLFN F+ + +F V+ I + + FV+
Sbjct: 131 KMIW-LTMLIYGCLFNSFNPWGMAFSVLNQIHSFNIIDAFVV 171
>AF125954-1|AAK68174.1| 340|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 60 protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 374 SYAIDSFTFFVQKHSLLFVRQLMILCLDLSRCSIFDLVTVFEADLYV 514
+Y + +FTFF+Q ++ R L I+C C F V F +++
Sbjct: 53 NYVLAAFTFFLQFRTVHNTRSLAIMC--QGPCKYFGAVWCFNGYIFI 97
>AF000299-3|AAW88403.1| 342|Caenorhabditis elegans Serpentine
receptor, class z protein24, isoform a protein.
Length = 342
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 185 SS*FILEIAR*TFLALSVLHVWVPL*SFRLFCLKLR--CYHFYPNH 54
+S I I T L L LHV + + L +R C+HFYP+H
Sbjct: 105 NSWLIFSILTITGLILFTLHVITQVFQILISLLAVRKFCFHFYPSH 150
>AF000299-2|AAC47981.2| 324|Caenorhabditis elegans Serpentine
receptor, class z protein24, isoform b protein.
Length = 324
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 185 SS*FILEIAR*TFLALSVLHVWVPL*SFRLFCLKLR--CYHFYPNH 54
+S I I T L L LHV + + L +R C+HFYP+H
Sbjct: 105 NSWLIFSILTITGLILFTLHVITQVFQILISLLAVRKFCFHFYPSH 150
>AC006769-2|AAF60583.2| 340|Caenorhabditis elegans Hypothetical
protein Y45G12C.7 protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 374 SYAIDSFTFFVQKHSLLFVRQLMILCLDLSRCSIFDLVTVFEADLYV 514
+Y + +FTFF+Q ++ R L I+C C F V F +++
Sbjct: 53 NYVLAAFTFFLQFRTVHNTRSLAIMC--QGPCKYFGAVWCFNGYIFI 97
>AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical
protein R02D3.2 protein.
Length = 743
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 2 ISEWFPSPNHHEHVHESHGW----DRSDNNEASSKKVETIKEAPK 124
ISE+ + + E GW D + E SSK+VE+ KE K
Sbjct: 696 ISEYLTELTQDDPIEEEEGWGWGDDDGEEQEISSKEVESPKEKCK 740
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 5 SEWFPSPNHHEHVHESHGWDRSDNNEASSKKVETIKEAPKHV 130
SE + NHH+HVH + S+N K ++ P HV
Sbjct: 1096 SESYHEHNHHQHVH-FDSVENSENIAHQCKSTTSLDYQPVHV 1136
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 17 PSPNHHEHVHESHGWDRSDNNEASSKKVE 103
P H HVH +G+ DN E + K ++
Sbjct: 165 PPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = -3
Query: 172 FWKLPGRLF---WRFRCYMFGCLFNRFDFFA*SFVVITSIPTMRFVHV 38
+W + G W + C +DFF +F V+ +IP + F V
Sbjct: 39 YWTIYGSFLIVDWFLSTFYVSCFIPFYDFFILTFTVLMAIPHIGFASV 86
>Z92789-2|CAB07219.1| 344|Caenorhabditis elegans Hypothetical
protein H02I12.5 protein.
Length = 344
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 17 PSPN-HHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAPEKS 154
P PN +H+ + E HG D + + + + I E PK + K P K+
Sbjct: 39 PQPNINHDAIIEGHGEDVELVEDKNYRSLHRIDETPK-LVDKKPSKA 84
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 81 KLQAKKSKRLKRHPNM*HRKRQKSLPGNFQNKL*TVEMLDVSIKVQIFFIESASAIAVK 257
K + KK K+L+ H R GN + L ++D S + +IF +ES S VK
Sbjct: 749 KKRRKKKKKLRSKKTREHELRFLKNSGNQASPL----LMDCSTQYEIFTVESGSQYDVK 803
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 81 KLQAKKSKRLKRHPNM*HRKRQKSLPGNFQNKL*TVEMLDVSIKVQIFFIESASAIAVK 257
K + KK K+L+ H R GN + L ++D S + +IF +ES S VK
Sbjct: 749 KKRRKKKKKLRSKKTREHELRFLKNSGNQASPL----LMDCSTQYEIFTVESGSQYDVK 803
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 81 KLQAKKSKRLKRHPNM*HRKRQKSLPGNFQNKL*TVEMLDVSIKVQIFFIESASAIAVK 257
K + KK K+L+ H R GN + L ++D S + +IF +ES S VK
Sbjct: 749 KKRRKKKKKLRSKKTREHELRFLKNSGNQASPL----LMDCSTQYEIFTVESGSQYDVK 803
>AL132865-12|CAB60601.1| 345|Caenorhabditis elegans Hypothetical
protein Y62E10A.14 protein.
Length = 345
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 17 PSPN-HHEHVHESHGWDRSDNNEASSKKVETIKEAPKHVAPKAPEKS 154
P PN +H+ + E HG D ++ + + + I E PK + K P K+
Sbjct: 39 PQPNINHDVIIEGHGEDVELVDDQNYRSLHRIDETPK-LVDKKPSKT 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,569,465
Number of Sequences: 27780
Number of extensions: 287841
Number of successful extensions: 832
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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