Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30605
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.0  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -3

Query: 97  NQMCKLLLNFR-RKENNCS 44
           NQ CKLL N +  +ENN S
Sbjct: 84  NQWCKLLENLKLDRENNSS 102


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -3

Query: 97  NQMCKLLLNFR-RKENNCS 44
           NQ CKLL N +  +ENN S
Sbjct: 84  NQWCKLLENLKLDRENNSS 102


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -3

Query: 97  NQMCKLLLNFR-RKENNCS 44
           NQ CKLL N +  +ENN S
Sbjct: 404 NQWCKLLENLKLDRENNSS 422


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 622 VCVRVIKKNNSNITSIVLINNTGTN 548
           V VR     N + T  + +NN+G N
Sbjct: 470 VFVRFTHLQNQDFTYKITVNNSGNN 494


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 671 LLTNKLCQFCLLF 633
           L TNK C F +LF
Sbjct: 316 LKTNKYCNFIILF 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,612
Number of Sequences: 336
Number of extensions: 3129
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)