Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30605
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD0853...    93   5e-19
AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB...    93   5e-19
AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA...    93   5e-19

>AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD08534
           protein.
          Length = 188

 Score = 92.7 bits (220), Expect = 5e-19
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = +2

Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRI 649
           APRSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRI
Sbjct: 79  APRSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRI 125



 Score = 91.9 bits (218), Expect = 8e-19
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +3

Query: 336 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVHL 515
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRV  
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 516 DLA*L*RISLMLVPVLLMRTIEVMLELFFLITRTQTLV*KKETELAQLICEKIYYP 683
                 +  + +   ++       L +            K    +AQ ICE+I+YP
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYP 136


>AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB,
           isoform B protein.
          Length = 174

 Score = 92.7 bits (220), Expect = 5e-19
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = +2

Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRI 649
           APRSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRI
Sbjct: 65  APRSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRI 111



 Score = 91.9 bits (218), Expect = 8e-19
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +3

Query: 336 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVHL 515
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRV  
Sbjct: 7   VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 66

Query: 516 DLA*L*RISLMLVPVLLMRTIEVMLELFFLITRTQTLV*KKETELAQLICEKIYYP 683
                 +  + +   ++       L +            K    +AQ ICE+I+YP
Sbjct: 67  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYP 122


>AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA,
           isoform A protein.
          Length = 188

 Score = 92.7 bits (220), Expect = 5e-19
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = +2

Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRI 649
           APRSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRI
Sbjct: 79  APRSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRI 125



 Score = 91.9 bits (218), Expect = 8e-19
 Identities = 49/116 (42%), Positives = 68/116 (58%)
 Frame = +3

Query: 336 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVHL 515
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRV  
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 516 DLA*L*RISLMLVPVLLMRTIEVMLELFFLITRTQTLV*KKETELAQLICEKIYYP 683
                 +  + +   ++       L +            K    +AQ ICE+I+YP
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYP 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,472,537
Number of Sequences: 53049
Number of extensions: 538736
Number of successful extensions: 1049
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)