Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30605
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 85 7e-17
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 85 7e-17
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 29 2.7
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 29 2.7
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 84.6 bits (200), Expect = 7e-17
Identities = 43/73 (58%), Positives = 50/73 (68%)
Frame = +2
Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIGTAYL*EDLLSWC 688
APRSGLA K+FIDVGAGVID DYRG V V+LFN + DF VKKGDRI E +
Sbjct: 407 APRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVC-EQIALCT 465
Query: 689 YRKLLNLSVTPKG 727
Y K+ +L VT +G
Sbjct: 466 YSKVESLEVTERG 478
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +2
Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRI 649
APRSGLA K+FIDVGAGVID DYRG V V+LFN +D F VKKGDRI
Sbjct: 244 APRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRI 290
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = +2
Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIGTAYL*EDLLSWC 688
APRSGLA K+FIDVGAGVID DYRG V V+LFN + T F VK GDRI + E + +
Sbjct: 88 APRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRI-AKLICEQIGNGT 146
Query: 689 YRKLLNLSVTPKG 727
Y ++ +L T +G
Sbjct: 147 YEEVKSLPSTNRG 159
Score = 72.9 bits (171), Expect = 2e-13
Identities = 52/114 (45%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 339 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRV--H 512
++FT+L+ENA P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRV
Sbjct: 187 VRFTQLNENAQTPTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPR 246
Query: 513 LDLA*L*RISLMLVPVLLMRTIEVMLELFFLITRTQTLV*KKETELAQLICEKI 674
LA I + + EV + LF + KK +AQLICEKI
Sbjct: 247 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEV--KKGDRIAQLICEKI 298
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +3
Query: 339 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRV 509
++ T+ ++NA P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRV
Sbjct: 350 IQITKSNDNAQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRV 406
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +3
Query: 339 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRV 509
++FT + +A +P GS +AG DL SA D VPA GK V T LQIELP G YGRV
Sbjct: 31 IRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRV 87
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 84.6 bits (200), Expect = 7e-17
Identities = 43/73 (58%), Positives = 50/73 (68%)
Frame = +2
Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIGTAYL*EDLLSWC 688
APRSGLA K+FIDVGAGVID DYRG V V+LFN + DF VKKGDRI E +
Sbjct: 407 APRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVC-EQIALCT 465
Query: 689 YRKLLNLSVTPKG 727
Y K+ +L VT +G
Sbjct: 466 YSKVESLEVTERG 478
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +2
Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRI 649
APRSGLA K+FIDVGAGVID DYRG V V+LFN +D F VKKGDRI
Sbjct: 244 APRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRI 290
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = +2
Query: 509 APRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIGTAYL*EDLLSWC 688
APRSGLA K+FIDVGAGVID DYRG V V+LFN + T F VK GDRI + E + +
Sbjct: 88 APRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRI-AKLICEQIGNGT 146
Query: 689 YRKLLNLSVTPKG 727
Y ++ +L T +G
Sbjct: 147 YEEVKSLPSTNRG 159
Score = 72.9 bits (171), Expect = 2e-13
Identities = 52/114 (45%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 339 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRV--H 512
++FT+L+ENA P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRV
Sbjct: 187 VRFTQLNENAQTPTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPR 246
Query: 513 LDLA*L*RISLMLVPVLLMRTIEVMLELFFLITRTQTLV*KKETELAQLICEKI 674
LA I + + EV + LF + KK +AQLICEKI
Sbjct: 247 SGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFTDNAFEV--KKGDRIAQLICEKI 298
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +3
Query: 339 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRV 509
++ T+ ++NA P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRV
Sbjct: 350 IQITKSNDNAQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRV 406
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +3
Query: 339 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRV 509
++FT + +A +P GS +AG DL SA D VPA GK V T LQIELP G YGRV
Sbjct: 31 IRFTEMVGDAQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRV 87
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 598 NNSNITSIVLINNTGTNINEILQS*ARSRCTLP*HPGG 485
NN N+T I I +GT N+ + A RC LP P G
Sbjct: 167 NNENVTGIH-IGRSGTYYNKQVTGSASKRCLLPSKPDG 203
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 598 NNSNITSIVLINNTGTNINEILQS*ARSRCTLP*HPGG 485
NN N+T I I +GT N+ + A RC LP P G
Sbjct: 167 NNENVTGIH-IGRSGTYYNKQVTGSASKRCLLPSKPDG 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,993,073
Number of Sequences: 27780
Number of extensions: 283640
Number of successful extensions: 566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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