Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30604
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.9  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 237 LHQAMHCWTVSVELYIF 287
           L++ + CW +S  +Y+F
Sbjct: 218 LYRLLRCWLISKCIYVF 234


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 237 LHQAMHCWTVSVELYIF 287
           L++ + CW +S  +Y+F
Sbjct: 218 LYRLLRCWLISKCIYVF 234


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 162 HGADKLIKVMNATVNFIL 109
           H   KLIK +NAT   IL
Sbjct: 220 HRLSKLIKQLNATYGLIL 237


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 664 WGLFPLQPSQQAVAGISTFG 723
           W L PL+ S Q V G   FG
Sbjct: 444 WELGPLKLSFQGVIGEGAFG 463


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,476
Number of Sequences: 336
Number of extensions: 4611
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)