Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30604
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14475-1|CAA32637.1| 415|Drosophila melanogaster protein ( D.me... 34 0.20
X77075-1|CAA54348.1| 417|Drosophila melanogaster protein ( D.me... 29 5.8
BT029129-1|ABJ17062.1| 994|Drosophila melanogaster IP16092p pro... 29 5.8
AF205831-1|AAF14808.1| 717|Drosophila melanogaster Melted protein. 29 5.8
AE014297-522|AAS65104.1| 417|Drosophila melanogaster CG1030-PC,... 29 5.8
AE014297-521|AAS65103.1| 417|Drosophila melanogaster CG1030-PB,... 29 5.8
AE014297-520|AAF54082.1| 417|Drosophila melanogaster CG1030-PA,... 29 5.8
AE014296-1200|AAF50606.1| 992|Drosophila melanogaster CG8624-PA... 29 5.8
AE014296-1199|AAX52758.1| 988|Drosophila melanogaster CG8624-PB... 29 5.8
AE001572-5|AAD19795.1| 417|Drosophila melanogaster homeodomain ... 29 5.8
>X14475-1|CAA32637.1| 415|Drosophila melanogaster protein (
D.melanogaster Scr (Sex combs reduced) homeotic gene. ).
Length = 415
Score = 34.3 bits (75), Expect = 0.20
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1
Query: 352 HSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDG-QGSVGFSTHL 528
+S AS P QN+ A NS S GAG S GG+ PS +G QGS G +T
Sbjct: 15 NSLASCYPQQMNPQQNHPGAGNSSAGGSG--GGAGGS-GGVVPSGGTNGGQGSAGAATPG 71
Query: 529 KSILLMVMPLF--NLAPITLQPTSRRRR 606
+ + NL P T QPT+ RR
Sbjct: 72 ANDYFPAAAAYTPNLYPNTPQPTTPIRR 99
>X77075-1|CAA54348.1| 417|Drosophila melanogaster protein (
D.melanogaster SCR gene exon1. ).
Length = 417
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 352 HSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDG-QGSVGFST 522
+S AS P QN+ A NS S GAG S GG+ PS +G QGS G +T
Sbjct: 15 NSLASCYPQQMNPQQNHPGAGNSSAGGSG--GGAGGS-GGVVPSGGTNGGQGSAGAAT 69
>BT029129-1|ABJ17062.1| 994|Drosophila melanogaster IP16092p
protein.
Length = 994
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 388 STQNYQPATNSHGDASSINVGAGYSIGGIKPSFS 489
ST PA+N+H + +NV +G S+GG+ S +
Sbjct: 449 STGRLHPASNTHRSVTRLNVASG-SVGGLHKSMT 481
>AF205831-1|AAF14808.1| 717|Drosophila melanogaster Melted protein.
Length = 717
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 388 STQNYQPATNSHGDASSINVGAGYSIGGIKPSFS 489
ST PA+N+H + +NV +G S+GG+ S +
Sbjct: 449 STGRLHPASNTHRSVTRLNVASG-SVGGLHKSMT 481
>AE014297-522|AAS65104.1| 417|Drosophila melanogaster CG1030-PC,
isoform C protein.
Length = 417
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 352 HSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDG-QGSVGFST 522
+S AS P QN+ A NS S GAG S GG+ PS +G QGS G +T
Sbjct: 15 NSLASCYPQQMNPQQNHPGAGNSSAGGSG--GGAGGS-GGVVPSGGTNGGQGSAGAAT 69
>AE014297-521|AAS65103.1| 417|Drosophila melanogaster CG1030-PB,
isoform B protein.
Length = 417
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 352 HSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDG-QGSVGFST 522
+S AS P QN+ A NS S GAG S GG+ PS +G QGS G +T
Sbjct: 15 NSLASCYPQQMNPQQNHPGAGNSSAGGSG--GGAGGS-GGVVPSGGTNGGQGSAGAAT 69
>AE014297-520|AAF54082.1| 417|Drosophila melanogaster CG1030-PA,
isoform A protein.
Length = 417
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 352 HSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDG-QGSVGFST 522
+S AS P QN+ A NS S GAG S GG+ PS +G QGS G +T
Sbjct: 15 NSLASCYPQQMNPQQNHPGAGNSSAGGSG--GGAGGS-GGVVPSGGTNGGQGSAGAAT 69
>AE014296-1200|AAF50606.1| 992|Drosophila melanogaster CG8624-PA,
isoform A protein.
Length = 992
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 388 STQNYQPATNSHGDASSINVGAGYSIGGIKPSFS 489
ST PA+N+H + +NV +G S+GG+ S +
Sbjct: 447 STGRLHPASNTHRSVTRLNVASG-SVGGLHKSMT 479
>AE014296-1199|AAX52758.1| 988|Drosophila melanogaster CG8624-PB,
isoform B protein.
Length = 988
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 388 STQNYQPATNSHGDASSINVGAGYSIGGIKPSFS 489
ST PA+N+H + +NV +G S+GG+ S +
Sbjct: 449 STGRLHPASNTHRSVTRLNVASG-SVGGLHKSMT 481
>AE001572-5|AAD19795.1| 417|Drosophila melanogaster homeodomain
protein protein.
Length = 417
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 352 HSSASYQPSYQISTQNYQPATNSHGDASSINVGAGYSIGGIKPSFSYDG-QGSVGFST 522
+S AS P QN+ A NS S GAG S GG+ PS +G QGS G +T
Sbjct: 15 NSLASCYPQQMNPQQNHPGAGNSSAGGSG--GGAGGS-GGVVPSGGTNGGQGSAGAAT 69
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,626,366
Number of Sequences: 53049
Number of extensions: 888066
Number of successful extensions: 2740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2733
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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