Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30602
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.71 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.2  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   2.8  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   6.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = -2

Query: 279 VYRSTLSLLRFDRKS---WRC*VVIAKSVSDSYGDSVRCIRESNRP*SGEGGSLTQHQCR 109
           +Y+  + L  F R++   W+  +  + S +D +   V+  R  ++P  G+G   + H   
Sbjct: 166 IYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF---VKVPRTPDKP--GKGSFWSLHPDS 220

Query: 108 *GQQYNNGCYVLRNHR 61
            G  + NGCY+ R  R
Sbjct: 221 -GNMFENGCYLRRQKR 235


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 246 RSEGDLELIDRLSKLPVDK 302
           ++  + E+ +RLS LPVDK
Sbjct: 238 QTTNEKEIFERLSALPVDK 256


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 246 RSEGDLELIDRLSKLPVDK 302
           ++  + E+ +RLS LPVDK
Sbjct: 240 QTTNEKEIFERLSALPVDK 258


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 7/40 (17%)
 Frame = +3

Query: 291 PVDKQPFWFINWQALEAHRKNP-------QTHVQRPNGFI 389
           P  + P WF+ W   +  R  P        T VQRP   +
Sbjct: 13  PPQEMPTWFVRWLNSQQPRNVPNFAAPSTSTAVQRPQAIL 52


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 246 RSEGDLELIDRLSKLPVDK 302
           ++  + E+ +RLS LPVDK
Sbjct: 238 QTTNEKEIFERLSVLPVDK 256


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 686 ECFSRQFFVVVVEIMI 639
           ECFS ++FV  VE ++
Sbjct: 88  ECFSTKYFVGCVESLL 103


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 277 D*ASCLSTSNPSGSSTGK 330
           D   CLS   PSG   GK
Sbjct: 102 DDEKCLSLERPSGGGKGK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,215
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)