Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30602
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.               33   1.6  
AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting cit...    33   1.6  
BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphat...    31   6.4  

>AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.
          Length = 2069

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +2

Query: 563 RAPLQTNPARKVWSRAEPYSLPMVRKSLFQRQQQKT--DAKNILDSIFIRFHPNSRKLLI 736
           R PL    A  + SRA   +L    K  F  QQQ +    + ILD++F+ F   S+  L+
Sbjct: 9   RNPLDAGAAEPIASRASRLNLFFQGKPPFMTQQQMSPLSREGILDALFVLFEECSQPALM 68

Query: 737 PFKNGS 754
             K+ S
Sbjct: 69  KIKHVS 74


>AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting citron
           kinase protein.
          Length = 2027

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +2

Query: 563 RAPLQTNPARKVWSRAEPYSLPMVRKSLFQRQQQKT--DAKNILDSIFIRFHPNSRKLLI 736
           R PL    A  + SRA   +L    K  F  QQQ +    + ILD++F+ F   S+  L+
Sbjct: 9   RNPLDAGAAEPIASRASRLNLFFQGKPPFMTQQQMSPLSREGILDALFVLFEECSQPALM 68

Query: 737 PFKNGS 754
             K+ S
Sbjct: 69  KIKHVS 74


>BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphatase
            domain containing 1 protein.
          Length = 1222

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
 Frame = +1

Query: 229  TPRLPIEAKET*S*SID*ASCLSTSNPSGSSTGKP*KRTGRTH--KLTCRGLTD-----S 387
            TPR  +E K+  +     A   STS   GSS+    +   RTH  KLT  G  D     S
Sbjct: 1043 TPRTLVEQKQNPTVGSHCAGLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDGFELYS 1102

Query: 388  *IPS-CPVKTL 417
             +PS CP++TL
Sbjct: 1103 MVPSICPLETL 1113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,728,039
Number of Sequences: 237096
Number of extensions: 2348575
Number of successful extensions: 4266
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4266
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)