Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30602
(805 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 25 0.62
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 25 1.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 25 1.1
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 24 1.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.5
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 5.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 5.8
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 25.4 bits (53), Expect = 0.62
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 154 PIGFPDTPNRITVAVGDRFGDDDSTTPRLPIEA 252
P PD + V +RFGDD T +LP++A
Sbjct: 34 PDYLPDRYRSVATQVFNRFGDD--TESKLPVKA 64
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 591 GKYGHGLNPTAFQ-WFVNHYFNDNNK 665
GKY + P + W++NH +N NK
Sbjct: 194 GKYKEYIIPANYSGWYLNHDYNLENK 219
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 591 GKYGHGLNPTAFQ-WFVNHYFNDNNK 665
GKY + P + W++NH +N NK
Sbjct: 194 GKYKEYIIPANYSGWYLNHDYNLENK 219
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 573 CKQTRRG--KYGHGLNPTAFQWFVNHYFNDNNKKLTRKTFSIVY 698
CK +R+G + ++ T F H F+D + + +TF VY
Sbjct: 155 CKWSRKGFLRTRWSISGTVFDLINIHLFHDASNFIAMETFPSVY 198
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 708 KRINILSRMFFASVF 664
KRI+++SR+FF VF
Sbjct: 413 KRIDVISRIFFPIVF 427
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 708 KRINILSRMFFASVF 664
KRI+++SR+FF VF
Sbjct: 413 KRIDVISRIFFPIVF 427
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 524 ETDLILTTPMLNQRAPLQTNPARKVWSR 607
+ D+I +TP+ N L +P ++ W R
Sbjct: 216 DEDIICSTPIGNLSHALLKDPVKEFWER 243
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 524 ETDLILTTPMLNQRAPLQTNPARKVWSR 607
+ D+I +TP+ N L +P ++ W R
Sbjct: 163 DEDVICSTPIGNLSHALLKDPVKEFWER 190
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 333 LEAHRKNPQTHVQRP 377
L H ++PQTHV P
Sbjct: 325 LNVHFRSPQTHVMAP 339
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 203 SPTATVILLGVSGNPIGLDP 144
+P ATV L+GV GN L P
Sbjct: 296 TPYATVALIGVYGNRELLTP 315
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 203 SPTATVILLGVSGNPIGLDP 144
+P ATV L+GV GN L P
Sbjct: 296 TPYATVALIGVYGNRELLTP 315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,772
Number of Sequences: 438
Number of extensions: 4508
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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