Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30601
(796 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 44 1e-06
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 43 3e-06
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 36 3e-04
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 31 0.011
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 27 0.13
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 27 0.23
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 27 0.23
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 26 0.30
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 24 1.2
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 6.5
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 22 6.5
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 22 6.5
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 44.4 bits (100), Expect = 1e-06
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 207 PWRG-LPHLPLRSGDSISCEHVPIHPGMYANVETGCQAYHVCHDGREGHQGASFLCTNGT 383
PWR ++ IS EH G++ + ET C Y C +G Q LC G
Sbjct: 78 PWRSNYCDNKQQANPPISTEHCDWLYGIFGH-ETSCTRYWTCWNGTATEQ----LCIGGL 132
Query: 384 LFDQAKFACDWWYNVDCSQAIEHYKLNADPLKN 482
L+++ +CDW NVD Q +H N DP N
Sbjct: 133 LYNERTHSCDWPENVDGCQ--KHPLCNDDPNGN 163
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 42.7 bits (96), Expect = 3e-06
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +3
Query: 270 PIHPGMYANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNVDCSQAIE 449
P PG Y C AY+ C G Q C G +++ + CDW + C +
Sbjct: 1102 PCEPGQYVPDPHNCNAYYRCVLGELRKQ----YCAGGLHWNKERKICDWPKSAKCEEKKP 1157
Query: 450 HYKLNADPLKNPYVPKQKPESTRNN 524
+K + + P P +P ST N+
Sbjct: 1158 GHKPSTSSWQKPTKPSYRPPSTTNH 1182
Score = 36.3 bits (80), Expect = 3e-04
Identities = 30/121 (24%), Positives = 49/121 (40%)
Frame = +3
Query: 165 RAREATGPAQRSRNPWRGLPHLPLRSGDSISCEHVPIHPGMYANVETGCQAYHVCHDGRE 344
R + T P + P + + P + E VP ++ +T C Y++C+ G+
Sbjct: 2203 RDNDKTKPKPTTMKPTTTIGYEPQEP--VLPAEVVPCQGRLFVADDTNCAQYYLCNQGQL 2260
Query: 345 GHQGASFLCTNGTLFDQAKFACDWWYNVDCSQAIEHYKLNADPLKNPYVPKQKPESTRNN 524
Q +C NG ++ K CDW N +C P P VP KP +T +
Sbjct: 2261 QLQ----VCPNGLFWN--KDHCDWPENTECHPDASS---TMAPSTTPMVP-DKPVTTTTS 2310
Query: 525 Q 527
+
Sbjct: 2311 R 2311
Score = 31.1 bits (67), Expect = 0.011
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 282 GMYANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNVDC---SQAIEH 452
G Y E+ C +++VC +G Q C G ++ + CDW Y V C Q +
Sbjct: 1210 GQYYPHES-CSSFYVCVNGHLVPQN----CAPGLHYNPEEHMCDWKYKVKCVGRKQLAQK 1264
Query: 453 YKLNADPLKNPY 488
Y+L PY
Sbjct: 1265 YQLPKMGGPQPY 1276
Score = 26.2 bits (55), Expect = 0.30
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +3
Query: 309 CQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNVDC 434
C AY+VC G H C +FD C++ C
Sbjct: 572 CAAYYVCRSGLSYH----LSCAENMMFDPMSGKCEYSLGEKC 609
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 363 FLCTNGTLFDQAKFACDWWYNVDC 434
F C G +D K CDW C
Sbjct: 1305 FNCAPGLHWDNNKNICDWPEKATC 1328
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 276 HPGMYANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNV-DCSQAIEH 452
HP YA+ + CQ ++VC +G + C G +FD CDW NV +C+ +
Sbjct: 183 HP-RYADPDD-CQYFYVCINGDTPRRSG---CKLGQVFDDVGKKCDWVRNVPECADWYKG 237
Query: 453 YKLNADPLK---NPYVPKQKP 506
+L + LK NP PK +P
Sbjct: 238 -RLTDEQLKELENPPTPKPRP 257
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 31.1 bits (67), Expect = 0.011
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 264 HVPIHPGMYANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNVD-CSQ 440
H+ HP + C+ Y++C R+ H C + +F+ + CDW NV+ C Q
Sbjct: 921 HISYHPD-----KADCRMYYMCEGERKHHMP----CPSNLVFNPDQNVCDWPENVEGCMQ 971
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 27.5 bits (58), Expect = 0.13
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 309 CQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNVD 431
C Y+ C G+ F C GT+F CDW + D
Sbjct: 488 CDKYYRCVHGKP----TEFACRPGTVFHTQSNICDWPEHAD 524
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 26.6 bits (56), Expect = 0.23
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 282 GMYANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQA--KFA---CDWWYNVDC 434
G Y + T C Y C + + C NG FD + KF CD+ +NVDC
Sbjct: 30 GFYPH-HTSCDKYWKC----DNNVAELKTCGNGLAFDASDPKFLTENCDYIHNVDC 80
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 26.6 bits (56), Expect = 0.23
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 282 GMYANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQA--KFA---CDWWYNVDC 434
G Y + T C Y C + + C NG FD + KF CD+ +NVDC
Sbjct: 30 GFYPH-HTSCDKYWKC----DNNVAELKTCGNGLAFDASDPKFLTENCDYIHNVDC 80
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 26.2 bits (55), Expect = 0.30
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = +3
Query: 288 YANVETGCQAYHVCHDGREGHQGASFLCTNGTLFDQAKFACDWWYNVDC 434
Y C ++ C G C G +FD+ K CD+ V C
Sbjct: 427 YVRDPDDCSIFYYCLAYNGGFVPLEQRCNAGLVFDEEKLWCDYPEVVKC 475
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 595 VYISVTCTHHRYFKFKSKLG 654
+++ +T HH FKF S +G
Sbjct: 67 LFLEMTLAHHCRFKFSSSVG 86
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 450 HYKLNADPLKNPYVPKQKPESTRNNQKSTIS 542
HY+LN +++P P TR T+S
Sbjct: 352 HYELNMVEVRSPVTPADLRLLTRGRLVLTVS 382
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 178 PQDLRNVPGTPGVDYPIYHSVPETR 252
P D+ + G+PGV+ P Y + E +
Sbjct: 98 PMDVPHGMGSPGVNVPEYPWMKEKK 122
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 178 PQDLRNVPGTPGVDYPIYHSVPETR 252
P D+ + G+PGV+ P Y + E +
Sbjct: 98 PMDVPHGMGSPGVNVPEYPWMKEKK 122
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,778
Number of Sequences: 336
Number of extensions: 4073
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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