Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30599
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    28   0.38 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.0  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   2.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   8.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.1  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 295 EDYGTAVT*TLNRSQK-ASQTAIITTRINKNKLLAASTRKLLRSQTSQLKLIQISIQRK 468
           E Y T +T   + +++   + AII T+  +NK+    T  + R + SQ++ I I +Q +
Sbjct: 18  EKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 530  RDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTS 631
            R+ +   VT   DH PV  +  G   V  F NT+
Sbjct: 1261 RESVDICVTDFNDHAPVFVVPSGNTTVKVFENTT 1294


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = +3

Query: 246 SLEENNDSTIYKGPQNRRLWNSGDVNIKP-----VTESITDGYNNNTYKQKQTTRSFYEE 410
           ++E+ +DS I+     R+L +  D+ + P      TE++   Y  +   ++   R+F EE
Sbjct: 55  AMEQASDSLIFLETA-RKLGDRFDIVVAPHKLADFTETLESDYIPHELIEQNVQRAFDEE 113

Query: 411 ITPFTNKPIK 440
               TNK  K
Sbjct: 114 RVRLTNKRAK 123


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +1

Query: 154 VDQSYGQRDNETYRDGHRYYRRRNETDMNTDHSKRTMIAQSIKVRKTEDYGTAVT*TLNR 333
           V  S+   +       HR  +   E  + T  SKR    + I + +T DYGT     ++R
Sbjct: 384 VQLSHDLEERSMAAAAHRTAKSLLEKAIRT--SKRQQFQELIDIAETNDYGTGYRVVMSR 441


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 22/66 (33%), Positives = 27/66 (40%)
 Frame = +2

Query: 548 SVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPLNGSEDGFRGKTK 727
           ++TH  DH  + Q     N VN F N SP +             P  L GS +G  G   
Sbjct: 337 TLTHPDDHALLKQQLIPSNLVNMFDNGSPSTSCG---------APPALLGSGEGGSGTHG 387

Query: 728 WDLGGE 745
            D GGE
Sbjct: 388 TDGGGE 393


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +3

Query: 243 GSLEENNDSTIYKGPQNRRLWNSGDVNIKPVTESITDGYNNNTYKQKQTT 392
           G    NN++    G       NSG  N      S+ +G N+ +     TT
Sbjct: 95  GKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTT 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,360
Number of Sequences: 2352
Number of extensions: 17891
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)