Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30599
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121174-1|AAI21175.1| 629|Homo sapiens SAMD4A protein protein. 33 1.6
BC121173-1|AAI21174.1| 629|Homo sapiens SAMD4A protein protein. 33 1.6
BC057838-1|AAH57838.1| 247|Homo sapiens SAMD4A protein protein. 33 1.6
AF429970-1|AAP97302.1| 146|Homo sapiens hypothetical protein pr... 33 1.6
AB028976-1|BAA83005.1| 508|Homo sapiens KIAA1053 protein protein. 33 1.6
BC024154-1|AAH24154.1| 934|Homo sapiens ATP11A protein protein. 31 4.7
AL356752-2|CAI16579.1| 934|Homo sapiens ATPase, Class VI, type ... 31 4.7
AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type ... 31 4.7
AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type ... 31 4.7
AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type ... 31 4.7
AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein. 31 4.7
X62153-1|CAA44078.2| 808|Homo sapiens P1.h protein protein. 30 8.3
M15996-1|AAA35700.1| 69|Homo sapiens protein ( Human synovial ... 30 8.3
D38073-1|BAA07267.1| 808|Homo sapiens hRlf beta subunit (p102 p... 30 8.3
BC003509-1|AAH03509.2| 808|Homo sapiens minichromosome maintena... 30 8.3
BC001626-1|AAH01626.1| 808|Homo sapiens minichromosome maintena... 30 8.3
AY621074-1|AAT27321.1| 808|Homo sapiens MCM3 minichromosome mai... 30 8.3
AY032603-1|AAK56392.1| 676|Homo sapiens cervical cancer proto-o... 30 8.3
AL034343-1|CAB75298.1| 808|Homo sapiens minichromosome maintena... 30 8.3
AK222586-1|BAD96306.1| 808|Homo sapiens minichromosome maintena... 30 8.3
>BC121174-1|AAI21175.1| 629|Homo sapiens SAMD4A protein protein.
Length = 629
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 112 LWTRNIENRETSTDVDQSYGQRDNETYRDGHRYYRRRNETD 234
+W ++E+R +++ Q+ G+ D+ Y H Y++R+N D
Sbjct: 144 MWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDD 184
>BC121173-1|AAI21174.1| 629|Homo sapiens SAMD4A protein protein.
Length = 629
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 112 LWTRNIENRETSTDVDQSYGQRDNETYRDGHRYYRRRNETD 234
+W ++E+R +++ Q+ G+ D+ Y H Y++R+N D
Sbjct: 144 MWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDD 184
>BC057838-1|AAH57838.1| 247|Homo sapiens SAMD4A protein protein.
Length = 247
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 112 LWTRNIENRETSTDVDQSYGQRDNETYRDGHRYYRRRNETD 234
+W ++E+R +++ Q+ G+ D+ Y H Y++R+N D
Sbjct: 145 MWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDD 185
>AF429970-1|AAP97302.1| 146|Homo sapiens hypothetical protein
protein.
Length = 146
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 112 LWTRNIENRETSTDVDQSYGQRDNETYRDGHRYYRRRNETD 234
+W ++E+R +++ Q+ G+ D+ Y H Y++R+N D
Sbjct: 44 MWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDD 84
>AB028976-1|BAA83005.1| 508|Homo sapiens KIAA1053 protein protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 112 LWTRNIENRETSTDVDQSYGQRDNETYRDGHRYYRRRNETD 234
+W ++E+R +++ Q+ G+ D+ Y H Y++R+N D
Sbjct: 23 MWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDD 63
>BC024154-1|AAH24154.1| 934|Homo sapiens ATP11A protein protein.
Length = 934
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 521 QGDRDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPL--- 691
QG D L+ + + PV I HGK Q + R GD VK+ P L
Sbjct: 85 QGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQ--SRKLRVGD-IVMVKEDETFPCDLIFL 141
Query: 692 -NGSEDGFRGKTKWDLGGESSYQTHF 766
+ DG T L GESS++TH+
Sbjct: 142 SSNRGDGTCHVTTASLDGESSHKTHY 167
>AL356752-2|CAI16579.1| 934|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 934
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 521 QGDRDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPL--- 691
QG D L+ + + PV I HGK Q + R GD VK+ P L
Sbjct: 85 QGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQ--SRKLRVGD-IVMVKEDETFPCDLIFL 141
Query: 692 -NGSEDGFRGKTKWDLGGESSYQTHF 766
+ DG T L GESS++TH+
Sbjct: 142 SSNRGDGTCHVTTASLDGESSHKTHY 167
>AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 521 QGDRDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPL--- 691
QG D L+ + + PV I HGK Q + R GD VK+ P L
Sbjct: 111 QGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQ--SRKLRVGD-IVMVKEDETFPCDLIFL 167
Query: 692 -NGSEDGFRGKTKWDLGGESSYQTHF 766
+ DG T L GESS++TH+
Sbjct: 168 SSNRGDGTCHVTTASLDGESSHKTHY 193
>AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 521 QGDRDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPL--- 691
QG D L+ + + PV I HGK Q + R GD VK+ P L
Sbjct: 111 QGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQ--SRKLRVGD-IVMVKEDETFPCDLIFL 167
Query: 692 -NGSEDGFRGKTKWDLGGESSYQTHF 766
+ DG T L GESS++TH+
Sbjct: 168 SSNRGDGTCHVTTASLDGESSHKTHY 193
>AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 521 QGDRDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPL--- 691
QG D L+ + + PV I HGK Q + R GD VK+ P L
Sbjct: 111 QGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQ--SRKLRVGD-IVMVKEDETFPCDLIFL 167
Query: 692 -NGSEDGFRGKTKWDLGGESSYQTHF 766
+ DG T L GESS++TH+
Sbjct: 168 SSNRGDGTCHVTTASLDGESSHKTHY 193
>AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein.
Length = 1102
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 521 QGDRDHLKESVTHMRDHDPVGQIDHGKNAVNQFVNTSPRSGDDFKSVKDMRCLPGPL--- 691
QG D L+ + + PV I HGK Q + R GD VK+ P L
Sbjct: 79 QGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQ--SRKLRVGD-IVMVKEDETFPCDLIFL 135
Query: 692 -NGSEDGFRGKTKWDLGGESSYQTHF 766
+ DG T L GESS++TH+
Sbjct: 136 SSNRGDGTCHVTTASLDGESSHKTHY 161
>X62153-1|CAA44078.2| 808|Homo sapiens P1.h protein protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>M15996-1|AAA35700.1| 69|Homo sapiens protein ( Human synovial
cell collagenase mRNA. ).
Length = 69
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 79 LKLLLWTFVCGLWTRNIENRETSTDVDQSYGQRDNETYRDGHRYYRRRN 225
L LL W V + +E +E D+ Q Y ++ + DG + +RRN
Sbjct: 8 LLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYKLKNDGRQVEKRRN 56
>D38073-1|BAA07267.1| 808|Homo sapiens hRlf beta subunit (p102
protein) protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + +GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKANAGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>BC003509-1|AAH03509.2| 808|Homo sapiens minichromosome maintenance
complex component 3 protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>BC001626-1|AAH01626.1| 808|Homo sapiens minichromosome maintenance
complex component 3 protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>AY621074-1|AAT27321.1| 808|Homo sapiens MCM3 minichromosome
maintenance deficient 3 (S. cerevisiae) protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>AY032603-1|AAK56392.1| 676|Homo sapiens cervical cancer
proto-oncogene 5 protein.
Length = 676
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>AL034343-1|CAB75298.1| 808|Homo sapiens minichromosome maintenance
complex component 3 protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
>AK222586-1|BAD96306.1| 808|Homo sapiens minichromosome maintenance
protein 3 variant protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 RDHLKESVTHMRDHDPVGQIDHGKNAV-NQFVNTSPRSGDDFKSVKDMRCLPGPLNGSED 706
+DH ++ M + P GQ+ + + + + + GD + V RCLPG G
Sbjct: 194 KDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTS 253
Query: 707 G 709
G
Sbjct: 254 G 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,336,876
Number of Sequences: 237096
Number of extensions: 2461442
Number of successful extensions: 6390
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6390
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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