Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30596
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 159 1e-39
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 159 1e-39
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 158 3e-39
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 157 1e-38
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 108 4e-24
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 108 4e-24
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 95 4e-20
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 94 8e-20
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 94 8e-20
At3g51880.1 68416.m05689 high mobility group protein alpha (HMGa... 33 0.29
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 32 0.51
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 31 0.67
At3g51880.2 68416.m05690 high mobility group protein alpha (HMGa... 29 2.7
At2g28630.1 68415.m03481 beta-ketoacyl-CoA synthase family protein 29 4.7
At3g62580.1 68416.m07030 expressed protein 28 8.3
At3g28870.1 68416.m03604 hypothetical protein 28 8.3
At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) simil... 28 8.3
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 159 bits (387), Expect = 1e-39
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLN 185
LAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ KK+ NNIKLYVRRVFIMDNCED+IPEYL
Sbjct: 295 LAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLG 354
Query: 186 FIRGVVDSEDLPLNISREMLQQNKF*K 266
F++G+VDSEDLPLNISRE LQQNK K
Sbjct: 355 FVKGIVDSEDLPLNISRETLQQNKILK 381
Score = 138 bits (333), Expect = 5e-33
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHT 436
ILKVIRKNLVKKCLELF E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K++ELLRYH+
Sbjct: 379 ILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHS 438
Query: 437 SASGDEACSLKEYVSRMKENQKHI 508
+ SGDE SLK+YV+RMKE Q I
Sbjct: 439 TKSGDELTSLKDYVTRMKEGQNDI 462
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +1
Query: 460 LSQRVCIQDEGEPETYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMRE 639
L V EG+ + + YITGE++ V NS F+E++KK+G EV+YM + IDEY + Q++E
Sbjct: 448 LKDYVTRMKEGQNDIF-YITGESKKAVENSPFLEKLKKKGIEVLYMVDAIDEYAIGQLKE 506
Query: 640 YDGKTL 657
++GK L
Sbjct: 507 FEGKKL 512
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 159 bits (387), Expect = 1e-39
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLN 185
LAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ KK+ NNIKLYVRRVFIMDNCED+IPEYL
Sbjct: 295 LAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLG 354
Query: 186 FIRGVVDSEDLPLNISREMLQQNKF*K 266
F++G+VDSEDLPLNISRE LQQNK K
Sbjct: 355 FVKGIVDSEDLPLNISRETLQQNKILK 381
Score = 138 bits (333), Expect = 5e-33
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHT 436
ILKVIRKNLVKKCLELF E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K++ELLRYH+
Sbjct: 379 ILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHS 438
Query: 437 SASGDEACSLKEYVSRMKENQKHI 508
+ SGDE SLK+YV+RMKE Q I
Sbjct: 439 TKSGDELTSLKDYVTRMKEGQNDI 462
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +1
Query: 460 LSQRVCIQDEGEPETYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMRE 639
L V EG+ + + YITGE++ V NS F+E++KK+G EV+YM + IDEY + Q++E
Sbjct: 448 LKDYVTRMKEGQNDIF-YITGESKKAVENSPFLEKLKKKGIEVLYMVDAIDEYAIGQLKE 506
Query: 640 YDGKTL 657
++GK L
Sbjct: 507 FEGKKL 512
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 158 bits (384), Expect = 3e-39
Identities = 71/87 (81%), Positives = 81/87 (93%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLN 185
LAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ KK+ NNIKLYVRRVFIMDNCED+IP+YL
Sbjct: 295 LAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPDYLG 354
Query: 186 FIRGVVDSEDLPLNISREMLQQNKF*K 266
F++G+VDSEDLPLNISRE LQQNK K
Sbjct: 355 FVKGIVDSEDLPLNISRETLQQNKILK 381
Score = 138 bits (334), Expect = 4e-33
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHT 436
ILKVIRKNLVKKCLELF E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K++ELLRYH+
Sbjct: 379 ILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHS 438
Query: 437 SASGDEACSLKEYVSRMKENQKHI 508
+ SGDE SLK+YV+RMKE Q I
Sbjct: 439 TKSGDELTSLKDYVTRMKEGQNEI 462
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = +1
Query: 460 LSQRVCIQDEGEPETYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMRE 639
L V EG+ E + YITGE++ V NS F+E++KK+GYEV+YM + IDEY + Q++E
Sbjct: 448 LKDYVTRMKEGQNEIF-YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAIGQLKE 506
Query: 640 YDGKTL 657
++GK L
Sbjct: 507 FEGKKL 512
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 157 bits (380), Expect = 1e-38
Identities = 71/87 (81%), Positives = 82/87 (94%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLN 185
LAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ +K+ NNIKLYVRRVFIMDNCE+LIPEYL+
Sbjct: 301 LAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLS 360
Query: 186 FIRGVVDSEDLPLNISREMLQQNKF*K 266
F++GVVDS+DLPLNISRE LQQNK K
Sbjct: 361 FVKGVVDSDDLPLNISRETLQQNKILK 387
Score = 136 bits (329), Expect = 2e-32
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHT 436
ILKVIRKNLVKKC+E+F E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K+++LLRYH+
Sbjct: 385 ILKVIRKNLVKKCIEMFNEIAENKEDYTKFYEAFSKNLKLGIHEDSQNRGKIADLLRYHS 444
Query: 437 SASGDEACSLKEYVSRMKENQKHI 508
+ SGDE S K+YV+RMKE QK I
Sbjct: 445 TKSGDEMTSFKDYVTRMKEGQKDI 468
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = +1
Query: 487 EGEPETYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMREYDGKTL 657
EG+ + + YITGE++ V NS F+ER+KKRGYEV+YM + IDEY V Q++EYDGK L
Sbjct: 463 EGQKDIF-YITGESKKAVENSPFLERLKKRGYEVLYMVDAIDEYAVGQLKEYDGKKL 518
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 108 bits (260), Expect = 4e-24
Identities = 48/85 (56%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEY 179
+A HF+ EG +EF+A+L+VP +AP DL+E+ K N+KLYVRRVFI D ++L+P+Y
Sbjct: 377 MAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFDELLPKY 436
Query: 180 LNFIRGVVDSEDLPLNISREMLQQN 254
L+F++G+VDS+ LPLN+SREMLQQ+
Sbjct: 437 LSFLKGLVDSDTLPLNVSREMLQQH 461
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +2
Query: 287 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 466
KK +E E E K Y K++ +F K++KLGI ED+ NR +L++LLR+ T+ S + SL
Sbjct: 495 KKDVEKSGENDEKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSL 554
Query: 467 KEYVSRMKENQKHI 508
+Y+ RMK++QK I
Sbjct: 555 DQYIKRMKKSQKDI 568
Score = 58.8 bits (136), Expect = 4e-09
Identities = 21/47 (44%), Positives = 37/47 (78%)
Frame = +1
Query: 511 YITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMREYDGK 651
YITG +++Q+ S F+ER+ K+GYEV++ T+P+DEY++ + +Y+ K
Sbjct: 570 YITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDK 616
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 108 bits (260), Expect = 4e-24
Identities = 48/85 (56%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEY 179
+A HF+ EG +EF+A+L+VP +AP DL+E+ K N+KLYVRRVFI D ++L+P+Y
Sbjct: 377 MAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFDELLPKY 436
Query: 180 LNFIRGVVDSEDLPLNISREMLQQN 254
L+F++G+VDS+ LPLN+SREMLQQ+
Sbjct: 437 LSFLKGLVDSDTLPLNVSREMLQQH 461
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +2
Query: 287 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 466
KK +E E E K Y K++ +F K++KLGI ED+ NR +L++LLR+ T+ S + SL
Sbjct: 495 KKDVEKSGENDEKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSL 554
Query: 467 KEYVSRMKENQKHI 508
+Y+ RMK++QK I
Sbjct: 555 DQYIKRMKKSQKDI 568
Score = 58.8 bits (136), Expect = 4e-09
Identities = 21/47 (44%), Positives = 37/47 (78%)
Frame = +1
Query: 511 YITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMREYDGK 651
YITG +++Q+ S F+ER+ K+GYEV++ T+P+DEY++ + +Y+ K
Sbjct: 570 YITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDK 616
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 95.5 bits (227), Expect = 4e-20
Identities = 47/87 (54%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPF--DLFENKKRKNNIKLYVRRVFIMDNCE-DLIPE 176
LA HF+ EG++EFR++L+VP +P D N+K KN I+LYV+RVFI D+ + +L P
Sbjct: 386 LASSHFTTEGEVEFRSILYVPPVSPSGKDDIVNQKTKN-IRLYVKRVFISDDFDGELFPR 444
Query: 177 YLNFIRGVVDSEDLPLNISREMLQQNK 257
YL+F++GVVDS DLPLN+SRE+LQ+++
Sbjct: 445 YLSFVKGVVDSHDLPLNVSREILQESR 471
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/86 (39%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFE--ELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRY 430
I+++++K LV+K ++ L+E++E+Y+K+++ F K+LKLG ED +N +++ LLR+
Sbjct: 472 IVRIMKKRLVRKAFDMILGISLSENREDYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRF 531
Query: 431 HTSASGDEACSLKEYVSRMKENQKHI 508
+S S ++ SL EYV MK QK I
Sbjct: 532 FSSQSENDMISLDEYVENMKPEQKAI 557
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 493 EPETYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMREYDGK 651
E + ++I ++ N+ F+E++ ++G EV+Y+ EPIDE V ++ Y K
Sbjct: 553 EQKAIYFIASDSITSAKNAPFLEKMLEKGLEVLYLVEPIDEVAVQSLKAYKEK 605
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 94.3 bits (224), Expect = 8e-20
Identities = 45/87 (51%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPE 176
LA HF+ EG++EFR++L++P P + + N K KN I+LYV+RVFI D+ + +L P
Sbjct: 363 LAHTHFTTEGEVEFRSILYIPGMGPLNNEDVTNPKTKN-IRLYVKRVFISDDFDGELFPR 421
Query: 177 YLNFIRGVVDSEDLPLNISREMLQQNK 257
YL+F++GVVDS+DLPLN+SRE+LQ+++
Sbjct: 422 YLSFVKGVVDSDDLPLNVSREILQESR 448
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/84 (39%), Positives = 58/84 (69%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHT 436
I++++RK L++K ++ +E++E EN +K++E F + LKLG ED+ N +++ LLR+ +
Sbjct: 449 IVRIMRKRLIRKTFDMIQEISES-ENKEKFWENFGRFLKLGCIEDTGNHKRITPLLRFFS 507
Query: 437 SASGDEACSLKEYVSRMKENQKHI 508
S + +E SL +Y+ M ENQK I
Sbjct: 508 SKNEEELTSLDDYIENMGENQKAI 531
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 478 IQDEGEPE-TYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMREYDGK 651
I++ GE + +Y+ ++ ++ F+E++ ++ EV+Y+ EPIDE + ++ Y K
Sbjct: 521 IENMGENQKAIYYLATDSLKSAKSAPFLEKLIQKDIEVLYLVEPIDEVAIQNLQTYKEK 579
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 94.3 bits (224), Expect = 8e-20
Identities = 45/87 (51%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = +3
Query: 6 LAVKHFSVEGQLEFRALLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPE 176
LA HF+ EG++EFR++L++P P + + N K KN I+LYV+RVFI D+ + +L P
Sbjct: 363 LAHTHFTTEGEVEFRSILYIPGMGPLNNEDVTNPKTKN-IRLYVKRVFISDDFDGELFPR 421
Query: 177 YLNFIRGVVDSEDLPLNISREMLQQNK 257
YL+F++GVVDS+DLPLN+SRE+LQ+++
Sbjct: 422 YLSFVKGVVDSDDLPLNVSREILQESR 448
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 ILKVIRKNLVKKCLELFEELAE--DKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRY 430
I++++RK L++K ++ +E++E +KE+YKK++E F + LKLG ED+ N +++ LLR+
Sbjct: 449 IVRIMRKRLIRKTFDMIQEISESENKEDYKKFWENFGRFLKLGCIEDTGNHKRITPLLRF 508
Query: 431 HTSASGDEACSLKEYVSRMKENQKHI 508
+S + +E SL +Y+ M ENQK I
Sbjct: 509 FSSKNEEELTSLDDYIENMGENQKAI 534
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 478 IQDEGEPE-TYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVPQMREYDGK 651
I++ GE + +Y+ ++ ++ F+E++ ++ EV+Y+ EPIDE + ++ Y K
Sbjct: 524 IENMGENQKAIYYLATDSLKSAKSAPFLEKLIQKDIEVLYLVEPIDEVAIQNLQTYKEK 582
>At3g51880.1 68416.m05689 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 178
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +2
Query: 308 EELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRM 487
E+ A+ K Y+K + ++KNL+ G E ++R+++++ ASG+E KE
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIND----EDEASGEEELLEKEAAGDD 160
Query: 488 KENQK 502
+E ++
Sbjct: 161 EEEEE 165
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5)
identical to HAC5 (GI:21105780) [Arabidopsis thaliana];
similar to CREB-binding protein GB:S39162 from [Homo
sapiens]
Length = 1670
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 422 LRYHTSASGDEACSLKEYVSRMKENQKHITTSLEKTE 532
L +H GDEAC + +V KE QK T L++ E
Sbjct: 672 LIHHYKHCGDEACPVCVFVKNFKEKQKEKFTFLQRAE 708
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +2
Query: 299 ELFEELAEDKENYKKY--YEQFSKNLKLGIHEDSQN--RAKLSELLRYHTSASGDEACSL 466
E EL E+KE +KY ++ K+L+ I++ + R KL ++ T AS +E+ +
Sbjct: 198 ERLRELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKAS-EESTKM 256
Query: 467 KEYVSRMKENQKHITTSLEKTETRWRTPHLWRE 565
+ V + +++ K + SL++ +T + +E
Sbjct: 257 YDRVEKAQDDSKSLDESLKELTKELQTLYKEKE 289
>At3g51880.2 68416.m05690 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 185
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +2
Query: 308 EELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSE 418
E+ A+ K Y+K + ++KNL+ G E ++R+++++
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIND 141
>At2g28630.1 68415.m03481 beta-ketoacyl-CoA synthase family protein
Length = 476
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 463 SQRVCIQDEGEPETYHYITGENRDQVANSSFVERVKKRGYEVVYMTEPI 609
S CIQ E E + G+N + A +FVE +K +++ +TE I
Sbjct: 254 SYNCCIQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELI 302
>At3g62580.1 68416.m07030 expressed protein
Length = 213
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 730 LIFPHVPSF-LPHLQEVLIPSFVTDTGSCHHTPSSVVLHIHQWAQS 596
++F ++P +LQ L P++ T GSC S ++H W S
Sbjct: 66 IMFKNLPRHQFGNLQSKLFPAYFTLVGSCCAISLSAFGYLHPWKSS 111
>At3g28870.1 68416.m03604 hypothetical protein
Length = 355
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 449 DEACSLKEYVSRMKENQKHITTSLEKTETRWR 544
D +L +SR+K+ +H+TT+ E+ + W+
Sbjct: 212 DHQRALPMILSRLKQKLRHVTTARERLKPLWK 243
>At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 12 (At1g65890) mRNA
GI:29893228, acyl-activating enzyme 12 [Arabidopsis
thaliana] GI:29893229
Length = 578
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 457 LLSQRVCIQDEGEPETYHYITGENRD 534
LL++ CIQDE +P + +Y +G D
Sbjct: 175 LLARMFCIQDEHDPISLNYTSGTTAD 200
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,197,277
Number of Sequences: 28952
Number of extensions: 319210
Number of successful extensions: 1155
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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