Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30595
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.16 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.84 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.84 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   7.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -3

Query: 659 RRSCAGSFCSAVSRTPRRPCMSEVPQREGLSPQQLHDERGVPCSSPPRA 513
           RR  +GS  S++S      C S V   E L+P++  +  GVP +S PR+
Sbjct: 802 RRERSGSESSSISER----CSSRV---ESLTPERKMEPPGVPLNSTPRS 843


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 371 TELHPTHPIRLGLALNFSVFYYEILNSPDR 460
           T+  P HP+R+   ++FS   Y+ + + D+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 371 TELHPTHPIRLGLALNFSVFYYEILNSPDR 460
           T+  P HP+R+   ++FS   Y+ + + D+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 146 PQPG*EGAP*HLL*HPRCPRQVPHPQLTD 232
           P PG    P HL  HP      P  +L D
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGPKQELPD 260


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 146 PQPG*EGAP*HLL*HPRCPRQVPHPQLTD 232
           P PG    P HL  HP      P  +L D
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGPKQELPD 152


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 565 GDKPSRCGTSDMQGRRGVRLTAEQKEPAQER 657
           G+KP RC   D +  +   +T   +  + ER
Sbjct: 46  GEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 76


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 565 GDKPSRCGTSDMQGRRGVRLTAEQKEPAQER 657
           G+KP RC   D +  +   +T   +  + ER
Sbjct: 302 GEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,788
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)