Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30595
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 121 7e-28
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 118 4e-27
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.32
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 30 2.3
SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16) 29 3.9
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 28 6.9
SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16) 28 6.9
SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7) 28 6.9
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_2890| Best HMM Match : rve (HMM E-Value=0.044) 28 6.9
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_45389| Best HMM Match : Peptidase_M13 (HMM E-Value=4.1e-09) 28 9.1
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 121 bits (291), Expect = 7e-28
Identities = 62/98 (63%), Positives = 68/98 (69%)
Frame = +2
Query: 242 KSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELHPTHPIRLGLALNF 421
K F KM+GDYHRYL E A G+ RKE E S AYK AS A EL P+HPIRLGLALNF
Sbjct: 124 KVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNF 182
Query: 422 SVFYYEILNSPDRACRLAKAAFDERHRRTDTLSEESYK 535
SVFYYEI N P AC+LAK AFD+ D L +ESYK
Sbjct: 183 SVFYYEIENKPPEACKLAKEAFDDAIAVLDNLKDESYK 220
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSVAYKNV+GARR+SWR+ISS+EQ K E+ + + YR + EL C++
Sbjct: 47 EERNLLSVAYKNVVGARRSSWRVISSMEQ----KAPEEMAALTKKYREDITNELNGKCAE 102
Query: 189 ILGVLDKYLIPSSQ---TGESKVFYTK*R 266
+L +L+ YL+ Q E+KVFY K R
Sbjct: 103 VLDILENYLLKDGQDDINTEAKVFYLKMR 131
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 118 bits (285), Expect = 4e-27
Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 TVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAE-DKLNMIRAYRSQVEKELRDI 179
+ E+RNLLSVAYKNVIGARRASWRII+SIEQKEE+KG + KL MIR YR +E+EL+ I
Sbjct: 38 STEDRNLLSVAYKNVIGARRASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTI 97
Query: 180 CSDILGVLDKYLIPSSQTGESKVFYTK 260
C +IL +LD LI +SQ+ ESKVFY K
Sbjct: 98 CGEILSLLDDSLIKNSQSEESKVFYNK 124
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 109 bits (263), Expect = 2e-24
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Frame = +2
Query: 209 VPHPQLTDRRIKSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE--LH 382
+P+ Q T+ ++ F KMKGDY+RY E A + R+E + ++ AY A +IA + L
Sbjct: 85 IPNAQSTESKV--FYLKMKGDYYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLP 142
Query: 383 PTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDERHRRTDTLSEESYK 535
PT PIRLGLALNFSVFYYEI+ +AC LAK AFD+ DTLSE+ YK
Sbjct: 143 PTDPIRLGLALNFSVFYYEIVEDSKQACDLAKKAFDDAIAELDTLSEDQYK 193
Score = 102 bits (244), Expect = 3e-22
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K YR +E EL ++C
Sbjct: 18 EERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERKKQNTETYRQTIENELNEVCET 75
Query: 189 ILGVLDKYLIPSSQTGESKVFYTK 260
+L +L+ LIP++Q+ ESKVFY K
Sbjct: 76 VLKLLESKLIPNAQSTESKVFYLK 99
Score = 80.2 bits (189), Expect = 2e-15
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 308 DRKEAAENSLVAYKAASDIAMT---ELHPTHPIRLGLALNFSVFYYEILNSPDRACRLAK 478
D E +L AYK A + A T +L PT PIRLGLALNFSVF+YEI + + AC+LAK
Sbjct: 204 DNLTVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAK 263
Query: 479 AAFDERHRRTDTLSEESYK 535
AFD+ D+L+E+ YK
Sbjct: 264 QAFDDAIAELDSLNEDQYK 282
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/84 (51%), Positives = 65/84 (77%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSV+YKN++G RR+SWR+ISSIE+K L +++ Y++ +EKEL+D+C +
Sbjct: 120 EERNLLSVSYKNIVGQRRSSWRVISSIEEK---TAESSSLAIVKKYKACIEKELKDLCKE 176
Query: 189 ILGVLDKYLIPSSQTGESKVFYTK 260
+LG+L++ LIP ++ E+KVFY K
Sbjct: 177 VLGILER-LIPGAEDEENKVFYFK 199
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 218 PQLTDRRIKSFLYKMKGDYHRYLAEFATGNDRK 316
P D K F +K+KGDY+RYLAEF+ G + K
Sbjct: 186 PGAEDEENKVFYFKLKGDYYRYLAEFSHGQEHK 218
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
E RNLLSV YKNV+G++R +WR + + + +L I Y+ ++E EL+ +C +
Sbjct: 226 EHRNLLSVGYKNVVGSKRFAWRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCRE 285
Query: 189 IL 194
IL
Sbjct: 286 IL 287
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +3
Query: 84 SIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDK 209
++ Q++E + A++K+N + AY++ E++LR+ D++ K
Sbjct: 2026 AVYQEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 625 TAEQKEPAQERRGPRTVFVMDAPSPLN*YTNNYSNRIK 738
T P+Q++R PR +V+ P+PL + +N +++ K
Sbjct: 267 TTTTPRPSQQQRHPRPRYVLPPPAPLEIHNSNAADKWK 304
>SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 913
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 616 VRLTAEQKEPAQERRGPRTVFVMDAPSPLN 705
++++ E+ + A+E++GP T M+ PSP N
Sbjct: 871 LQVSPEEPDAAEEKQGPSTPEAMNLPSPPN 900
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 653 SCAGSFCSAVSRTPRRPCMSEVPQREGLSPQQLHDERGVPCSSPP 519
SC+ + C+ SRT RR C S PQ GL+ E PC+ P
Sbjct: 207 SCSVT-CAQGSRTRRRLCTSPPPQHGGLNCTGAFSET-TPCNLRP 249
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 616 VRLTAEQKEPAQERRGPRTVFVMDAPSPLN 705
++++ E+ + A+E++GP T M PSP N
Sbjct: 1537 LQVSPEEPDAAEEKQGPSTPEAMTLPSPPN 1566
>SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16)
Length = 560
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 616 VRLTAEQKEPAQERRGPRTVFVMDAPSPLN 705
++++ E+ + A+E++GP T M PSP N
Sbjct: 507 LQVSPEEPDAAEEKQGPSTPEAMTLPSPPN 536
>SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7)
Length = 477
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 616 VRLTAEQKEPAQERRGPRTVFVMDAPSPLN 705
++++ E+ + A+E++GP T M PSP N
Sbjct: 247 LQVSPEEPDAAEEKQGPSTPEAMTLPSPPN 276
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 616 VRLTAEQKEPAQERRGPRTVFVMDAPSPLN 705
++++ E+ + A+E++GP T M PSP N
Sbjct: 1513 LQVSPEEPDAAEEKQGPSTPEAMTLPSPPN 1542
>SB_2890| Best HMM Match : rve (HMM E-Value=0.044)
Length = 336
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 616 VRLTAEQKEPAQERRGPRTVFVMDAPSPLN 705
++++ E+ + A+E++GP T M PSP N
Sbjct: 283 LQVSPEEPDAAEEKQGPSTPEAMTLPSPPN 312
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 220 GMRYLSRTPRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEE 80
G R RTP ++ + S +W YALI+F+L F+ C++ E
Sbjct: 77 GSRLKGRTPHLTRALM--SILSWSEYALILFSL----FIGVACNILE 117
>SB_45389| Best HMM Match : Peptidase_M13 (HMM E-Value=4.1e-09)
Length = 177
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 350 AASDIAMTELHPTHPIRL-GLALNFSVF 430
AA DI +HP HPIR+ G+ N F
Sbjct: 129 AAEDIVRMSVHPLHPIRINGVVSNSEEF 156
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,838,994
Number of Sequences: 59808
Number of extensions: 410394
Number of successful extensions: 1379
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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