Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30595
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            29   0.11 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   5.6  
AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive ...    23   7.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.8  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 377 LHPTHPIRLGLALNFSVFYYEILNSPDRACRLAKA-AFDERHRRTDTLSEESYKGL 541
           LHP + +RL L  N  +F+   L SP    +L K  A    + +   LSE S++GL
Sbjct: 66  LHPENTVRLRLQCNDGLFFQSSL-SPGSFKQLTKLHALSIEYCKIANLSEGSFQGL 120


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +1

Query: 535 GTPRSSCSCCGDKPSRCGTSDMQGRRGVRLTAE--QKEPAQERRGPRTVFV 681
           G+P SS S      S C  S   G    R  A   Q++  Q+R+  R   V
Sbjct: 38  GSPLSSISSSSRNSSSCNNSSSSGTHSDRPVAGMLQQQQQQQRQPQRQAVV 88


>AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR5 protein.
          Length = 110

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 541 PRSSCSCCGDKPSRCGTS 594
           P +  S CGD+P+ C  S
Sbjct: 43  PDTDISYCGDEPTACAES 60


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 90  EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDIL 194
           E+KEE K  E+KL       +   +  RD+ + +L
Sbjct: 154 EEKEEAKRREEKLEAQMEKLAAAHQRDRDVLNSLL 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,208
Number of Sequences: 2352
Number of extensions: 12916
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)