Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30595
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 135 4e-32
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 128 3e-30
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 127 7e-30
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 122 3e-28
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 28 6.0
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 135 bits (326), Expect = 4e-32
Identities = 62/98 (63%), Positives = 76/98 (77%)
Frame = +2
Query: 242 KSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELHPTHPIRLGLALNF 421
K F KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNF 176
Query: 422 SVFYYEILNSPDRACRLAKAAFDERHRRTDTLSEESYK 535
SVF+YEILN+PD+AC+LAK AFD+ DTL+E+SYK
Sbjct: 177 SVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYK 214
Score = 122 bits (294), Expect = 3e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSVAYKNV+GARR+SWR+ISSIEQK T+G+E K M + YR +VEKELRDIC D
Sbjct: 41 EERNLLSVAYKNVVGARRSSWRVISSIEQK--TEGSEKKQQMAKEYREKVEKELRDICQD 98
Query: 189 ILGVLDKYLIPSSQTGESKVFYTK 260
+L +LDK+LIP + ESKVFY K
Sbjct: 99 VLNLLDKFLIPKAGAAESKVFYLK 122
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 128 bits (310), Expect = 3e-30
Identities = 62/98 (63%), Positives = 74/98 (75%)
Frame = +2
Query: 242 KSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELHPTHPIRLGLALNF 421
K+F KMKGDY+RYLAE A+ DR E S AY+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNF 175
Query: 422 SVFYYEILNSPDRACRLAKAAFDERHRRTDTLSEESYK 535
SVFYYEILN+P+ AC+LAK AFD+ DTL+E+SYK
Sbjct: 176 SVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYK 213
Score = 109 bits (261), Expect = 3e-24
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSVAYKNV+GARR+SWR+ISSIEQK T+G+E K + + YR +VE+EL DIC D
Sbjct: 41 EERNLLSVAYKNVVGARRSSWRVISSIEQK--TEGSEKKQQLAKEYRVKVEQELNDICQD 98
Query: 189 ILGVLDKYLIPSSQTGESKVFYTK 260
+L +LD++LI + ESK FY K
Sbjct: 99 VLKLLDEFLIVKAGAAESKAFYLK 122
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 127 bits (307), Expect = 7e-30
Identities = 62/98 (63%), Positives = 73/98 (74%)
Frame = +2
Query: 242 KSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELHPTHPIRLGLALNF 421
K F KMKGDY+RYLAE A+ DR E S AY+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNF 175
Query: 422 SVFYYEILNSPDRACRLAKAAFDERHRRTDTLSEESYK 535
SVFYYEILN+P+ AC+LAK AFD+ DTL+E+SYK
Sbjct: 176 SVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYK 213
Score = 110 bits (265), Expect = 9e-25
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSVAYKNV+GARR+SWR+ISSIEQK T+G+E K + + YR +VE+EL DIC D
Sbjct: 41 EERNLLSVAYKNVVGARRSSWRVISSIEQK--TEGSEKKQQLAKEYRVKVEQELNDICQD 98
Query: 189 ILGVLDKYLIPSSQTGESKVFYTK 260
+L +LD++LI + ESKVFY K
Sbjct: 99 VLKLLDEFLIVKAGAAESKVFYLK 122
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 122 bits (294), Expect = 3e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 9 EERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 188
EERNLLSVAYKNV+GARR+SWR+ISSIEQK T+G+E K M + YR +VEKELRDIC D
Sbjct: 41 EERNLLSVAYKNVVGARRSSWRVISSIEQK--TEGSEKKQQMAKEYREKVEKELRDICQD 98
Query: 189 ILGVLDKYLIPSSQTGESKVFYTK 260
+L +LDK+LIP + ESKVFY K
Sbjct: 99 VLNLLDKFLIPKAGAAESKVFYLK 122
Score = 115 bits (276), Expect = 4e-26
Identities = 52/79 (65%), Positives = 63/79 (79%)
Frame = +2
Query: 242 KSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELHPTHPIRLGLALNF 421
K F KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNF 176
Query: 422 SVFYYEILNSPDRACRLAK 478
SVF+YEILN+PD+AC+LAK
Sbjct: 177 SVFFYEILNAPDKACQLAK 195
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 75.8 bits (178), Expect = 3e-14
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 260 MKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELHPTHPIRLGLALNFSVFYYE 439
M D+ RYL ++ N R+E A S +AY+ A IA ++ PTHPIRLGLALN S ++
Sbjct: 1 MVADHFRYLVQYDDIN-REEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59
Query: 440 ILNSPDRACRLAKAAFDERHRRTDTL--SEESY 532
+LN P A +A++A D HR + + S +SY
Sbjct: 60 VLNLPKEANEIAQSALDSAHRELEKMKSSLDSY 92
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +2
Query: 191 PRCPRQVPHPQLTDRRIKSFLYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAM 370
P P +P+PQLT RR SF RK + L A SDI
Sbjct: 106 PGTPSTIPNPQLTQRRATSFRSNGSSTSSTLTVNGEGRKSRKGSTTELLTPNSARSDIYS 165
Query: 371 TELH 382
E +
Sbjct: 166 IEFN 169
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 78 ISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFY 254
+SS E+ E + A +KLN +R S + + +CS + ++ I SS ++ Y
Sbjct: 100 LSSEERHFELESARNKLNGLRIQNSNFGRREQKVCSFLSSGFEQVRILSSTAAHDEIRY 158
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 511 HALGGELQGTPRSSCSCCGDKPSRCGTSD 597
+ +GG +Q P S C+ CGD P G ++
Sbjct: 17 YVIGGGVQANP-SGCNVCGDSPQWSGWTE 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,221,089
Number of Sequences: 27780
Number of extensions: 294349
Number of successful extensions: 1108
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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