Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30593
(803 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 206 7e-52
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 130 3e-29
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 113 4e-24
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 103 7e-21
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 102 9e-21
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 93 1e-17
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 91 4e-17
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 90 5e-17
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 87 4e-16
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 86 9e-16
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 84 3e-15
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 84 5e-15
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 83 8e-15
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 83 1e-14
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 80 7e-14
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 77 4e-13
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 77 4e-13
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 77 5e-13
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 75 3e-12
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 73 6e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 71 3e-11
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 63 7e-09
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 55 2e-06
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 2e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 47 5e-04
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 46 8e-04
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 45 0.002
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.042
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.073
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.097
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 39 0.13
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.17
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.22
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 1.2
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 36 1.2
UniRef50_A3LS74 Cluster: Predicted protein; n=1; Pichia stipitis... 36 1.2
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 35 2.1
UniRef50_Q59Q32 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q4RNK7 Cluster: Chromosome 21 SCAF15012, whole genome s... 34 3.6
UniRef50_Q16V76 Cluster: Set domain protein; n=1; Aedes aegypti|... 34 3.6
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 4.8
UniRef50_Q4Q687 Cluster: Nucleosome assembly protein-like protei... 34 4.8
UniRef50_Q0IED6 Cluster: Zinc finger protein; n=1; Aedes aegypti... 34 4.8
UniRef50_A7BDN4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_A7THX5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_UPI0000E485E2 Cluster: PREDICTED: hypothetical protein;... 33 8.4
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 206 bits (502), Expect = 7e-52
Identities = 123/240 (51%), Positives = 140/240 (58%)
Frame = +1
Query: 1 KKSTKKPRNYDLGNGVTAFLQIQDVPQEG*IQVHWXXXXXXXXXXXXXXXXXXXWR*EEW 180
KKSTKKPRNYDLGNGV F + + ++ + +
Sbjct: 23 KKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNG 82
Query: 181 GNQNSTPQT*EVLLPHSGENPCFICGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 360
G + + + P + GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL
Sbjct: 83 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 142
Query: 361 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNVITSRRIRSAS 540
VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFN ++ +
Sbjct: 143 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCV 202
Query: 541 NVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVDEAVIQSHRSPTRQRRVLRGIPSKAGF 720
K KK K QKTVDEAVI++ ++VLRG KA F
Sbjct: 203 KRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKA-IGARPDKKVLRGY-LKAAF 260
Score = 115 bits (276), Expect = 2e-24
Identities = 56/68 (82%), Positives = 57/68 (83%)
Frame = +2
Query: 50 LRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPT 229
+RFSKSKMFHKKAKYKFIG LTVVVKQIGGEKNGGTRTVPLKRRKSFYPT
Sbjct: 39 MRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPT 98
Query: 230 QEKIRASS 253
QEKIRASS
Sbjct: 99 QEKIRASS 106
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 130 bits (315), Expect = 3e-29
Identities = 67/131 (51%), Positives = 87/131 (66%)
Frame = +1
Query: 265 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 444
FS+H R R NL GTV ILLAGRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QR
Sbjct: 103 FSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQR 162
Query: 445 YVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKP 624
YVIGTS+++ LG FK+P+H N RR+++ + ++ + + KK K
Sbjct: 163 YVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEADIFAA---KKERFVPNEQRKK 219
Query: 625 IQKTVDEAVIQ 657
QK VD A+++
Sbjct: 220 DQKEVDAALLK 230
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +2
Query: 50 LRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPT 229
LR+SK++M+ ++A Y+ VK+IGG KNGG RTV LK+ K+ YPT
Sbjct: 31 LRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKASYPT 90
Query: 230 QEKIR 244
+ ++
Sbjct: 91 KTFVK 95
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 113 bits (273), Expect = 4e-24
Identities = 67/161 (41%), Positives = 87/161 (54%)
Frame = +1
Query: 265 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 444
FS HVR+IR +++ GTV ILLAG H GKRV+ + L SGLLLVTGPF +N PLRR+ Q
Sbjct: 80 FSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQC 139
Query: 445 YVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKP 624
YVI TSTRI + F +PKH + RR+ + K T + + K
Sbjct: 140 YVIATSTRIDISKFDVPKHIDDEYFRRVDLKESKTDAGKLFSTETKKYTVSDIRKEDQKL 199
Query: 625 IQKTVDEAVIQSHRSPTRQRRVLRGIPSKAGFRDFGSKPIF 747
+ + A I+SH LR + S G RD+ K IF
Sbjct: 200 VDNQI-RAAIKSHPDSKILHAYLRSLFS-LGKRDYPHKMIF 238
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 103 bits (246), Expect = 7e-21
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +1
Query: 259 RPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIP 438
+PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR
Sbjct: 131 KPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTH 190
Query: 439 QRYVIGTSTRISLGNFKLPKH 501
Q++VI TST+I + N K+PKH
Sbjct: 191 QKFVIATSTKIDISNVKIPKH 211
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 53 RFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSF 220
R+S+S M+ +KA KY L V K +GG+KNGGTR V L++ +
Sbjct: 56 RYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRY 115
Query: 221 YPTQE 235
YPT++
Sbjct: 116 YPTED 120
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 102 bits (245), Expect = 9e-21
Identities = 59/130 (45%), Positives = 76/130 (58%)
Frame = +1
Query: 265 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 444
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 445 YVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKP 624
YVI T TRI + N K+P N R R + + ++ ++K+ T K
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFR--RQDLKTKKSVDKIFAE--EEKKYTVS-DDRKK 200
Query: 625 IQKTVDEAVI 654
+QK VD A+I
Sbjct: 201 LQKQVDTALI 210
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 92.7 bits (220), Expect = 1e-17
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = +1
Query: 283 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
++R ++ GTV ILLAG H GKRVV + L SGLLLVTGPF N PLRRIPQ YVI TS
Sbjct: 95 KLRSSITPGTVLILLAGAHRGKRVVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATS 154
Query: 463 TRISLGNFKLPKH 501
T I + + KLP+H
Sbjct: 155 THIDVSDVKLPEH 167
Score = 46.4 bits (105), Expect = 8e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 53 RFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQ 232
R+S+S ++ K+A YK T K IGG+KNGG R VP++R +YPT+
Sbjct: 21 RYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPVQRESRYYPTE 79
Query: 233 E 235
+
Sbjct: 80 D 80
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 90.6 bits (215), Expect = 4e-17
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +1
Query: 268 SKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRY 447
+K+ +IR +L+ GT+ ILLAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+
Sbjct: 85 NKNPPKIRKSLQPGTILILLAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKL 144
Query: 448 VIGTSTRISLGNFKLPKHFNVITSRR 525
VI TSTRI + N K+P+H N RR
Sbjct: 145 VIATSTRIDISNVKVPEHINDTYFRR 170
Score = 38.3 bits (85), Expect = 0.22
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 146 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEK 238
V+ K+IGG+KNGGTR V ++ FYP +
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSR 74
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 570 DIFATKKEKYVPSEQRKTDSED 635
DIFA+K E+Y P+EQRK D +
Sbjct: 181 DIFASKPERYTPTEQRKKDQAE 202
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 90.2 bits (214), Expect = 5e-17
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Frame = +1
Query: 259 RPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIP 438
+P S+ +R + GTV ILLAG H GKRVV + L +GLL VTGP+ N CPLRRI
Sbjct: 107 KPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQLKTGLLPVTGPYGVNGCPLRRIN 166
Query: 439 QRYVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 618
Q YVI TST++ L KLP+ + +R + + + + + PQ+ H+ S
Sbjct: 167 QIYVIATSTKLDLSKVKLPEGLDDRYFKRNKGPKRGRKDEGEIFEAKPQE-----HVVSE 221
Query: 619 --KPIQKTVDEAVIQSHRSPTRQRRVLRGIPSKAGFRD 726
K Q VD+ V+++ ++ ++ +L + + R+
Sbjct: 222 EHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAATFSLRN 259
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +2
Query: 56 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 235
FS+SKMFHK+ +K V VK++ GEKNGG R +PLK+ + YPT++
Sbjct: 37 FSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPLKKERRSYPTED 96
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 87.4 bits (207), Expect = 4e-16
Identities = 54/124 (43%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 286 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 463 TRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVD 642
++++ K+P+H N + S Q K + S K T K I KTVD
Sbjct: 127 LKVNVSGVKIPEHIN---DEYFKRKSTAQKTGKNIFAS--GKTEYTVSEQRKKDI-KTVD 180
Query: 643 EAVI 654
++
Sbjct: 181 APIL 184
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 86.2 bits (204), Expect = 9e-16
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +1
Query: 250 ICGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLR 429
+ GR ++ V ++R +LK G V ILL G + GKRVVL+ +L SGLLLVTGPF+FN PLR
Sbjct: 29 VVGRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLR 87
Query: 430 RIPQRYVIGTSTRI 471
R+ RYVI TST +
Sbjct: 88 RVNSRYVIATSTNV 101
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 84.2 bits (199), Expect = 3e-15
Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Frame = +1
Query: 283 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
++R ++ GTV I+LAGR GKRVV + L SGLLLVTGPF N PLRR+ Q YVIGTS
Sbjct: 84 KLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTS 143
Query: 463 TRISLGNFKL----PKHFNVITSRRIRSASNVQSNA-KRVMTSLPQKKRNTFHLSSAKPI 627
T++ + L K+F + ++ + A K +PQ K++
Sbjct: 144 TKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDD--------- 194
Query: 628 QKTVDEAVIQS 660
QK VD A+I++
Sbjct: 195 QKAVDAALIKA 205
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 83.8 bits (198), Expect = 5e-15
Identities = 50/123 (40%), Positives = 69/123 (56%)
Frame = +1
Query: 286 IRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTST 465
+R ++ GTV I+LAGR AGKRVV + L SGL+L+TGPF N PLRRI QRYVI TST
Sbjct: 87 LRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATST 146
Query: 466 RISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVDE 645
+I + + K+ N + ++ A +KK+ S QK+VD
Sbjct: 147 KIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDEKKAEKKKIA---DSRVADQKSVDS 203
Query: 646 AVI 654
A++
Sbjct: 204 AIL 206
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 83.0 bits (196), Expect = 8e-15
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 283 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N P+RR+ Y+I TS
Sbjct: 34 KLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVRRVNPAYIIATS 93
Query: 463 TRISLGNFKLPKHFNVITSRRIR-SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTV 639
T++ + + K T + S ++ + M + K N K Q+ +
Sbjct: 94 TKVDVSKADVSK----FTDEYFKVDRSKLKKSKDAFMDQGEETKVNRVVSEERKKTQQAL 149
Query: 640 DEAVIQSHRS 669
D ++I S +S
Sbjct: 150 DASIIPSIQS 159
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 82.6 bits (195), Expect = 1e-14
Identities = 46/127 (36%), Positives = 64/127 (50%)
Frame = +1
Query: 274 HVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVI 453
H ++RP+L+ GT+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVI 109
Query: 454 GTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQK 633
TS+ + L V Q + +K S+ QK
Sbjct: 110 ATSSTVDLNGVDQKTLEKVSQPEYFTREKAEQKKGEEAFFKQGEKPEKKKVASARAADQK 169
Query: 634 TVDEAVI 654
+D+A++
Sbjct: 170 AIDQALL 176
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 79.8 bits (188), Expect = 7e-14
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = +1
Query: 283 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
++R ++ GTV ILLAGR GKRVV + L SGLLLVTGPF N P+RR+ Q YVI TS
Sbjct: 73 KLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATS 132
Query: 463 TRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSL-PQKKRNTFHLSS-AKPIQKT 636
T++ + + K + SR + + AK+ L +K T +L K QK
Sbjct: 133 TKVDISGVNVEKFDDKYFSR------DKKQKAKKTEGELFETEKEATKNLPEFKKEDQKV 186
Query: 637 VDEAVIQS 660
VD +I++
Sbjct: 187 VDAELIKA 194
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 77.4 bits (182), Expect = 4e-13
Identities = 38/72 (52%), Positives = 49/72 (68%)
Frame = +1
Query: 283 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
++RP++K GT+ ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TS
Sbjct: 67 KLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATS 126
Query: 463 TRISLGNFKLPK 498
T I + + K
Sbjct: 127 TSIDVSKVDVKK 138
Score = 36.7 bits (81), Expect = 0.68
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 140 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEK 238
+ ++ K IGG KNGG R VP K+ +YP +K
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDK 52
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 77.4 bits (182), Expect = 4e-13
Identities = 46/102 (45%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = +1
Query: 259 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 432
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 433 IPQRYVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNA 558
+ RYVI TS ++ L K N I + +A + A
Sbjct: 84 VNARYVIATSQKVDLAGIDEAK-INEIAQPKYFTAEKSKEKA 124
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 77.0 bits (181), Expect = 5e-13
Identities = 47/125 (37%), Positives = 68/125 (54%)
Frame = +1
Query: 280 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 459
+++R +L GTV ILLAGR GKRVV + L LL++GPF N PLRR+ RYVI T
Sbjct: 28 QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVNARYVIAT 87
Query: 460 STRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTV 639
ST++S+ + K FNV + + K+ P+++ + QK V
Sbjct: 88 STKVSVEGVNVEK-FNV----EYFAKEKLTKKEKKEANLFPEQQNKEIKAERVED-QKVV 141
Query: 640 DEAVI 654
D+A+I
Sbjct: 142 DKALI 146
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Frame = +1
Query: 280 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 459
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I T
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVT 127
Query: 460 STRI-SLGNFKLPKHFNVITSRRIRSASNVQS-NAKRVMTSLPQKKRNTFHLSSAKPIQK 633
ST I N K + ++ RI ++S + K+ L + K + ++ IQK
Sbjct: 128 STNIFDFNNLSQVKEKFIQSAERINDEIFIKSMDVKKRQKKLLKNKNESLFMNDV--IQK 185
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 73.3 bits (172), Expect = 6e-12
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Frame = +1
Query: 307 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 486
G V ILL+GR GKRVV + L SGLLLVTGPF N PL+R+ YVI TST++ +
Sbjct: 61 GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTSTKVDVTGV 120
Query: 487 KLPK-HFNVITSRRIRSASNVQSN-AKRVMTSLPQKKRNTFHLSSAKPIQKTVDEAVI 654
+ + + + + N Q AKR ++ Q+ L + QK+VD A+I
Sbjct: 121 NANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQTAEKTRLDGKRNTQKSVDAALI 178
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.3 bits (167), Expect = 3e-11
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +1
Query: 310 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 489
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 490 LPKHFNVITSRRIRSASNVQSNAKR 564
KH +T + S Q+ A R
Sbjct: 73 TSKH---LTDASFKKQSAAQAQAPR 94
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 63.3 bits (147), Expect = 7e-09
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Frame = +1
Query: 286 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 462
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 463 TRISLGN----------FKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS 612
T + + + F+ PK S ++ A++ + + T
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 613 SAKPIQKTVDEAVI 654
+ +QK +D A+I
Sbjct: 149 ARAQLQKKIDAALI 162
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +1
Query: 346 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNVITSRR 525
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K + +++
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEKFDDKYFAKK 215
Query: 526 IR 531
++
Sbjct: 216 VQ 217
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 289 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 468
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 469 ISL 477
I +
Sbjct: 109 IEV 111
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 289 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 468
R +L G V ++L G A +RVV + L + L GP + N PL RI +RY++ TST
Sbjct: 24 RTDLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLATSTV 83
Query: 469 ISL 477
+ L
Sbjct: 84 LDL 86
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/98 (30%), Positives = 46/98 (46%)
Frame = +1
Query: 382 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAK 561
L GPF+ N P+RRI Q++V+ TST+I + K+P +T + K
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPA---TMTDDYFKRTKYFGKEKK 66
Query: 562 RVMTSLPQKKRNTFHLSSAKPIQKTVDEAVIQSHRSPT 675
+ Q K+ + K QKT+D AV+ S + T
Sbjct: 67 DI---FEQGKQEYTLTDARKADQKTIDTAVLGSIKKHT 101
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +1
Query: 262 PFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQ 441
P KH + + N TV I++ G+H +RVV + L G LL+TGP A N L R Q
Sbjct: 123 PAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQ 179
Query: 442 RYVIGTSTRIS 474
+ V+ TST I+
Sbjct: 180 KSVVITSTTIN 190
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 292 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 450
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.073
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 289 RPNLKIGTVCILLAGRHAGKRVVLVGILP 375
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.097
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 292 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 435
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 295 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 474
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 475 LGNFKLPKHFN 507
NF L KH N
Sbjct: 101 GLNF-LTKHTN 110
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 38.7 bits (86), Expect = 0.17
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 283 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 423
++R ++ GTV I+LAGR VV + L SGLLL+TG F N P
Sbjct: 227 KLRASITPGTVLIILAGR-----VVFLKQLSSGLLLITGSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 298 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 477
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 349 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 474
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 35.9 bits (79), Expect = 1.2
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Frame = +1
Query: 298 LKIGTVCILLAGRHAGKRVVLVGIL-------PSGLLLVTGPFAF-----NSCPLRRIPQ 441
LK G V I+ +GR+AGK+ V+V P G L+ G + R I +
Sbjct: 4 LKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTIQR 63
Query: 442 RYVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKR 564
R +G R+ LP +N+ SR +R NV +K+
Sbjct: 64 RSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKK 104
>UniRef50_A3LS74 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 481
Score = 35.9 bits (79), Expect = 1.2
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 361 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKH--FNVITSRRIRS 534
+GI+PS + P L R V +S++I+ + KH + ITS+RIR
Sbjct: 339 IGIIPSSTRTSSNPALLEGSVLTSSKMRTVSISSSQIARPIKAISKHTGHSTITSKRIRD 398
Query: 535 ASNVQSNAKRVMTSLPQKKRNTFHLSS 615
S S S+ Q K N + SS
Sbjct: 399 TSTTSSTTSSKPHSIKQTKANKYITSS 425
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 35.1 bits (77), Expect = 2.1
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Frame = +1
Query: 298 LKIGTVCILLAGRHAGKRVVLV---GIL----PSGLLLVTGPFAFNSCPLR-----RIPQ 441
LK G V I+ AGR+AG + V+V ++ P G L+ G + +R I +
Sbjct: 5 LKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQTIAR 64
Query: 442 RYVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKR 564
R +G R+ LP +NV S+ +R NV +KR
Sbjct: 65 RSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKR 105
>UniRef50_Q59Q32 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 113
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +1
Query: 484 FKLPKHFNVITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIQKTVDEAVIQSH 663
+K PK+FN + S K TSL QK+RN + + K ++K + + +
Sbjct: 10 YKTPKNFNPLKELNRNIEHKTISTKKSDTTSLWQKRRNKIKILNRKFLEKKTERQPFKDN 69
Query: 664 RSPTRQRRVLRGI 702
S T+ R+ + +
Sbjct: 70 YSKTKLNRIYQDL 82
>UniRef50_Q4RNK7 Cluster: Chromosome 21 SCAF15012, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF15012, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 304
Score = 34.3 bits (75), Expect = 3.6
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -2
Query: 790 SLNPKDFKKRKPEWGILASNRS---PESPLLKVSRGAPFFVGSGSDGFESQPRRLSSES 623
+LNP+ K RK EW L P++ L+ S G +GSG DGF S+ S+ S
Sbjct: 146 TLNPRKVKTRKEEWERLKMGEEFVVPKNDLMNSSEGLNGSIGSG-DGFMSESLDQSTSS 203
>UniRef50_Q16V76 Cluster: Set domain protein; n=1; Aedes aegypti|Rep:
Set domain protein - Aedes aegypti (Yellowfever mosquito)
Length = 2091
Score = 34.3 bits (75), Expect = 3.6
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 564 GDDIF-ATKKEKYVPSEQRKTDSEDSRRGCDSKPSEPDPTKKGAPRDTFK--SGLSGLRF 734
G ++F ++ K+VPSE K ++ ++ CD P E +PT R+T S +S R
Sbjct: 930 GPELFDSSNLTKHVPSEAEKATTKPAKN-CDRVPKEGEPTDSFIERNTRPRLSVVSLERL 988
Query: 735 EANIPHSG 758
+ IP SG
Sbjct: 989 QGKIPMSG 996
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 4.8
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 256 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 414
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q4Q687 Cluster: Nucleosome assembly protein-like protein;
n=3; Leishmania|Rep: Nucleosome assembly protein-like
protein - Leishmania major
Length = 408
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 561 EGDDIFATKKEKYVPSEQRKTDSEDSRRGCDSKPSEPDPTKKGAP 695
E +FA +KE V + T+ E R GC + P+EPD + AP
Sbjct: 73 ENQKLFAVRKE-IVTGARDITEEEMQRIGCTAAPTEPDKKEDAAP 116
>UniRef50_Q0IED6 Cluster: Zinc finger protein; n=1; Aedes aegypti|Rep:
Zinc finger protein - Aedes aegypti (Yellowfever
mosquito)
Length = 852
Score = 33.9 bits (74), Expect = 4.8
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Frame = +1
Query: 226 HSGENPCF--ICGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTG 399
H+GE PC ICG+ FS+ + +R +++I T A + + L + TG
Sbjct: 616 HTGEKPCLCTICGKGFSRSNKLVR-HMRIHTGTRPYACTYCDRSFTQSNDLTLHIRRHTG 674
Query: 400 --PFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNVITSRRIRSASNVQSNAKRVMT 573
P+ C +R++ GT+ + + ++ HF+ T++ R AS +N RV
Sbjct: 675 EKPYVCGVC-----NERFIQGTALK---AHQRITGHFDDGTTQPERFASISVNNPNRVEN 726
Query: 574 SLPQKKRNTFHLSSAKPIQKTV 639
S P+ R T +S + I K V
Sbjct: 727 SGPKAVR-TSPGASGEGIPKVV 747
>UniRef50_A7BDN4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 482
Score = 33.5 bits (73), Expect = 6.4
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 591 EKYVPSEQRKTDSEDSRRGCDSKPSEPDPTKKGAPRDTFKSGLSGLRFEANIP 749
E+YVP T R G D+ P + DP ++ A DT LSG+R +P
Sbjct: 360 EEYVPDPLTDTFERRGRHGLDNGPIDQDPPER-ATTDTGVIDLSGIRGGRTLP 411
>UniRef50_A7THX5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1637
Score = 33.5 bits (73), Expect = 6.4
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 606 SEQRKTDSEDSRRGCD--SKPSEPDPTKKGAPRDTFKSGLSGLRFEANIPHSGLRFLKSL 779
S +D++ +RR S P+ P KG PRD+F S + + NIP G R L +
Sbjct: 1161 STNDSSDADCNRRNSSIGSFPNVAQPLFKGGPRDSFNS-IGSIVLPPNIPPHGQR-LSNF 1218
Query: 780 GLREIKI 800
GL K+
Sbjct: 1219 GLNGSKV 1225
>UniRef50_UPI0000E485E2 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 630
Score = 33.1 bits (72), Expect = 8.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 567 DDIFATKKEKYVPSEQRKTDSEDSRRGCDSKPSEPDPTKKGAPRDTFKSG 716
D+ TK + P++ + +KP EP PTK P DTF++G
Sbjct: 313 DEPHPTKPDGPTPTKPEEPHPTKPDEPHPTKPDEPHPTKPEEPADTFQAG 362
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 842,619,126
Number of Sequences: 1657284
Number of extensions: 17793672
Number of successful extensions: 55279
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 52315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55200
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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