Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30591
(780 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 154 3e-36
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 146 7e-34
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 138 1e-31
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 130 3e-29
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 128 2e-28
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 125 1e-27
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 124 2e-27
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 117 3e-25
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 111 2e-23
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 106 5e-22
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 106 7e-22
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 104 2e-21
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 104 3e-21
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 104 3e-21
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 98 2e-19
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 96 8e-19
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 92 2e-17
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 88 3e-16
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 85 2e-15
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 84 4e-15
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 83 8e-15
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 82 1e-14
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 81 4e-14
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 78 3e-13
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 76 1e-12
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 74 5e-12
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 73 8e-12
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 71 4e-11
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 67 5e-10
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 65 2e-09
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 7e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 61 3e-08
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 56 1e-06
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 54 4e-06
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 52 2e-05
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 51 4e-05
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 48 2e-04
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 47 5e-04
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 47 5e-04
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 43 0.007
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 43 0.007
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.017
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 41 0.040
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 40 0.053
UniRef50_Q5TSD3 Cluster: ENSANGP00000028986; n=1; Anopheles gamb... 40 0.092
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 39 0.12
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.21
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 38 0.21
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 38 0.28
UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1; ... 37 0.49
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 37 0.49
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 37 0.65
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.65
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 36 0.86
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 36 1.5
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 36 1.5
UniRef50_A7F8B8 Cluster: Predicted protein; n=1; Sclerotinia scl... 36 1.5
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 35 2.6
UniRef50_A7RFS9 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.5
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 34 3.5
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 3.5
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 34 4.6
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 33 6.1
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 33 6.1
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 33 6.1
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 33 8.0
UniRef50_A6DJ25 Cluster: Probable ECF sigma factor; n=2; Lentisp... 33 8.0
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 33 8.0
UniRef50_O00423 Cluster: Echinoderm microtubule-associated prote... 33 8.0
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 154 bits (373), Expect = 3e-36
Identities = 73/85 (85%), Positives = 76/85 (89%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPRLL+V DP D
Sbjct: 71 PADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRAD 130
Query: 434 HQPITEASYVNIPVIALCNTDSPLR 508
HQP+TEASYVN+P IALCNTDSPLR
Sbjct: 131 HQPLTEASYVNLPTIALCNTDSPLR 155
Score = 112 bits (270), Expect = 8e-24
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
MSG LDVL + EEDV K LAA THLG N++FQME Y+YKR++DG ++INL+RTWEKL+L
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 225 AARAVVAIENP 257
AARA+VAIENP
Sbjct: 61 AARAIVAIENP 71
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESE 678
P + VDIAIPCN K +HS+GLMWW+LAREVLR+RG + R + RDPEE E
Sbjct: 153 PLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDL-YFYRDPEEIE 211
Query: 679 K 681
K
Sbjct: 212 K 212
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 146 bits (353), Expect = 7e-34
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV V++++PFGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPRLLIV D D
Sbjct: 71 PADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSD 130
Query: 434 HQPITEASYVNIPVIALCNTDSPLR 508
HQPITEA+YVNIPVIA CNT+SPLR
Sbjct: 131 HQPITEAAYVNIPVIAFCNTNSPLR 155
Score = 102 bits (245), Expect = 9e-21
Identities = 45/71 (63%), Positives = 58/71 (81%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
MSGGL+VL++ E+DVTK+LAA THLG NV+ QM YV+K + DG +IN+R+TWEKL+L
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 225 AARAVVAIENP 257
AAR + AIENP
Sbjct: 61 AARVIAAIENP 71
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +1
Query: 481 FVQHRLPTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTR 660
F P + +D+AIPCN +S+GLMWWLL REVLRLRG + R + R
Sbjct: 147 FCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMPDL-FFYR 205
Query: 661 DPEESEK 681
DPEE EK
Sbjct: 206 DPEEVEK 212
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 138 bits (334), Expect = 1e-31
Identities = 67/83 (80%), Positives = 71/83 (85%)
Frame = +2
Query: 257 ADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 436
ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP DH
Sbjct: 152 ADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPRVDH 211
Query: 437 QPITEASYVNIPVIALCNTDSPL 505
QP+ EASYVN+P IALCNTDSPL
Sbjct: 212 QPLMEASYVNLPTIALCNTDSPL 234
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESE 678
P VDIAIPCN K +HS+G+MWW+L EV R+ G + R C RDPEE E
Sbjct: 233 PLCYVDIAIPCNNKGAHSVGVMWWMLVPEVRRISGTISREHPWEVMTDPC-FYRDPEEIE 291
Query: 679 K 681
K
Sbjct: 292 K 292
Score = 40.3 bits (90), Expect = 0.053
Identities = 37/113 (32%), Positives = 47/113 (41%)
Frame = +3
Query: 30 QISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTW 209
Q + TM G DVL +NEEDV K LAA TH +E + VI+ R T
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH--SEKLLLAARAIAAIENLADVSVISSRNTG 163
Query: 210 EKLVLAARAVVAIENPLMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLL 368
++ VL A C + S PR PV+ R V HQ L+
Sbjct: 164 QRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR-VDHQPLM 215
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 130 bits (315), Expect = 3e-29
Identities = 63/83 (75%), Positives = 68/83 (81%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP D
Sbjct: 70 PEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSD 129
Query: 434 HQPITEASYVNIPVIALCNTDSP 502
Q I EASYVNIPVIAL + DSP
Sbjct: 130 AQAIKEASYVNIPVIALTDLDSP 152
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/62 (59%), Positives = 42/62 (67%)
Frame = +3
Query: 72 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
L ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEKLVLAAR + AI
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 252 NP 257
NP
Sbjct: 69 NP 70
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESE 678
P++ VD+AIPCN + HSIGL+W+LLAREVLRLRG L RDPEE E
Sbjct: 152 PSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVE 211
Query: 679 K 681
+
Sbjct: 212 Q 212
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 128 bits (308), Expect = 2e-28
Identities = 63/99 (63%), Positives = 75/99 (75%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL++V DP D
Sbjct: 73 PADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRAD 132
Query: 434 HQPITEASYVNIPVIALCNTDSPLRLWTLLSHATPSLPT 550
Q I EAS+VNIPVIALC+TDS +L+H ++PT
Sbjct: 133 AQAIKEASFVNIPVIALCDTDS------ILNHVDIAIPT 165
Score = 87.4 bits (207), Expect = 4e-16
Identities = 35/69 (50%), Positives = 53/69 (76%)
Frame = +3
Query: 51 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 230
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++NL +TWEKLVLAA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 231 RAVVAIENP 257
R + IENP
Sbjct: 65 RVIATIENP 73
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = +1
Query: 511 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESEK 681
VDIAIP N K SIGL+W+LLAREVLR+RG L R + RDPEE E+
Sbjct: 159 VDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPDL-YFYRDPEEVER 214
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 125 bits (302), Expect = 1e-27
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP D
Sbjct: 75 PQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTD 134
Query: 434 HQPITEASYVNIPVIALCNTDSPLR 508
HQPI E + NIP+IA C+TDSP+R
Sbjct: 135 HQPIKEGALGNIPIIAFCDTDSPMR 159
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/64 (59%), Positives = 47/64 (73%)
Frame = +3
Query: 66 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 245
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEKL +AAR +VA
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 246 IENP 257
IENP
Sbjct: 72 IENP 75
Score = 53.2 bits (122), Expect = 7e-06
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRG 618
P + VDI IP N K HSIG ++WLLAR VL++RG + G
Sbjct: 157 PMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAG 196
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 124 bits (300), Expect = 2e-27
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV +I +P QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPRLLIV DP D
Sbjct: 71 PADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGD 130
Query: 434 HQPITEASYVNIPVIALCNTDSPLR 508
HQP+ E S VNIPVI CNTDSPL+
Sbjct: 131 HQPVREGSAVNIPVIGFCNTDSPLQ 155
Score = 97.5 bits (232), Expect = 3e-19
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEKL+L
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 225 AARAVVAIENP 257
AARA+ AIENP
Sbjct: 61 AARAICAIENP 71
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 615
P + VDI IPCN +SI LM W+LAREV R+ G+ PR
Sbjct: 153 PLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPR 190
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 117 bits (282), Expect = 3e-25
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P DV ++RP+GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP D
Sbjct: 94 PQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTD 153
Query: 434 HQPITEASYVNIPVIALCNTDSPLR 508
QPI+E ++VNIP IA C+TDSPL+
Sbjct: 154 AQPISETAFVNIPTIAFCDTDSPLK 178
Score = 93.5 bits (222), Expect = 5e-18
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +3
Query: 66 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 245
++ E D+ MLAA HLG +NV+FQME YV+KRRADG H+INL +TW+KL+LAAR +VA
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 246 IENP 257
+ENP
Sbjct: 91 VENP 94
Score = 50.0 bits (114), Expect = 7e-05
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL-PRGPALGCCGLICSSTRDPEES 675
P K VDIAIP N K+ SIG +++LLAR VL++RG + P P L RDPEE
Sbjct: 176 PLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLF--FYRDPEEL 233
Query: 676 E 678
E
Sbjct: 234 E 234
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 111 bits (267), Expect = 2e-23
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P +V V+S+RP+G RAVLKF+ + G+ PIAGR+ PG TNQI F EPRLL+ DP D
Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTD 130
Query: 434 HQPITEASYVNIPVIALCNTDSPL 505
Q + E+SYV++PVIALC+TDSPL
Sbjct: 131 AQSLRESSYVSLPVIALCDTDSPL 154
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
M+ L +E+ + ML A H+G +NV +M YVY R +G H+INL T EKL +
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 225 AARAVVAIENP 257
AARA+V + NP
Sbjct: 61 AARAIVTVSNP 71
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 615
P VDIAIPCN K SI LM+WLLAREVL LR L R
Sbjct: 153 PLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKR 191
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 106 bits (255), Expect = 5e-22
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 421
S+ P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+IV D
Sbjct: 78 SNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSD 137
Query: 422 PAQDHQPITEASYVNIPVIALCNTDSPLR 508
P+ DHQ + E+ Y+N+P I N+D+ L+
Sbjct: 138 PSVDHQALRESGYINVPTIGFWNSDNRLK 166
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +3
Query: 60 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 239
D+L + ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEKL LAAR +
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 240 VAIEN 254
I N
Sbjct: 75 AGISN 79
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 106 bits (254), Expect = 7e-22
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P DV V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP D
Sbjct: 91 PQDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTD 150
Query: 434 HQPITEASYVNIPVIALCNTDSPL 505
Q EAS VNIPVIA C+TD+PL
Sbjct: 151 QQAFREASLVNIPVIAFCDTDAPL 174
Score = 66.5 bits (155), Expect = 7e-10
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +3
Query: 84 DVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENP 257
DV K++A H G +N + M+ Y++ R +GT++I+L TWEKL+LAAR + A+ENP
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENP 91
Score = 62.9 bits (146), Expect = 9e-09
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESE 678
P + VDIAIPCN + +SI +M+WLLAREVLRLRG +PR + RDPEE+
Sbjct: 173 PLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVPWD-VKVDLFFYRDPEEAL 231
Query: 679 K 681
K
Sbjct: 232 K 232
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 104 bits (250), Expect = 2e-21
Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRLLIVL 418
+P DV V+SSRP GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+LLIV
Sbjct: 95 QPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQLLIVT 154
Query: 419 DPAQDHQPITEASYVNIPVIALCNTDSPLR 508
DP D Q I EASYVNIPVIAL N+D+PL+
Sbjct: 155 DPHLDRQAIVEASYVNIPVIALTNSDTPLQ 184
Score = 64.9 bits (151), Expect = 2e-09
Identities = 24/66 (36%), Positives = 45/66 (68%)
Frame = +3
Query: 60 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 239
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+ + LAAR +
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 240 VAIENP 257
AIE P
Sbjct: 91 AAIEQP 96
Score = 41.5 bits (93), Expect = 0.023
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 609
P + VDI IP + + SI +++WLLAREV LRG L
Sbjct: 182 PLQYVDIPIPVGNRETKSISMIYWLLAREVKILRGEL 218
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 104 bits (249), Expect = 3e-21
Identities = 49/90 (54%), Positives = 62/90 (68%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP D
Sbjct: 72 PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTD 131
Query: 434 HQPITEASYVNIPVIALCNTDSPLRLWTLL 523
HQPI E++ P++ P + TL+
Sbjct: 132 HQPIKESALETSPLLLSVTLILPCAMSTLM 161
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 177 GTHVINLRRTWEKLVLAARAVVAIENP 257
G +INL +TWEKL LAAR +VAIENP
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENP 72
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 104 bits (249), Expect = 3e-21
Identities = 47/86 (54%), Positives = 63/86 (73%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
+PA++ V+++RP QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 431 DHQPITEASYVNIPVIALCNTDSPLR 508
D Q I EASYVNIP I+LCN+D+ L+
Sbjct: 135 DRQAILEASYVNIPTISLCNSDANLK 160
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +3
Query: 72 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K+V AAR +V I+
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 252 NP 257
+P
Sbjct: 75 DP 76
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 505 KIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 615
K +D+AIPCN K+ SIGL++WLLAREVLRL+G + R
Sbjct: 160 KFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISR 196
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = +2
Query: 287 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 466
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 467 IPVIALCNTDSPLR 508
IP IA C+ DSP+R
Sbjct: 93 IPTIAFCDIDSPMR 106
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRG 618
P + VDI I N K H+IG ++WLL VL +R + G
Sbjct: 104 PMRYVDIDILTNNKGKHNIGCLFWLLTMMVLHMRHTIALG 143
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 96.3 bits (229), Expect = 8e-19
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
EP DV IS++ FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 68 EPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPNT 127
Query: 431 DHQPITEASYVNIPVIALCNTDSPL 505
D Q + EA+Y NIP IALC+TD+ L
Sbjct: 128 DSQAVHEAAYANIPCIALCDTDAHL 152
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 ALNEEDVTKM-LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 245
A + E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK+ LAAR + A
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 246 IENP 257
+E P
Sbjct: 66 VEEP 69
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1
Query: 511 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 615
VD IPCNTK+ +S+GL+ WLL REVLRLRG L R
Sbjct: 155 VDCVIPCNTKNKNSMGLVMWLLTREVLRLRGALTR 189
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 91.9 bits (218), Expect = 2e-17
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 248 REPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 427
+ P++V VISSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP
Sbjct: 50 KHPSEVGVISSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPR 109
Query: 428 QDHQPITEASYVNIPVIALCNTDSPL 505
DH + EA YVN+ IAL N+ SPL
Sbjct: 110 ADHPFLMEAPYVNLLTIALRNSQSPL 135
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3
Query: 96 MLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENP 257
+L A THLG N +F+M +YKR +G ++NL R++EKL+ A +VA+++P
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHP 52
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = +2
Query: 248 REPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 427
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV D
Sbjct: 74 KHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTY 133
Query: 428 QDHQPITEASYVNIPVIALCNTDSPL 505
D Q I E+ Y N+P IA NTD+ L
Sbjct: 134 ADKQAILESQYCNLPTIAFVNTDNSL 159
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRA-DGTHVINLRRTWEKLVLAARA 236
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEKL++AARA
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 237 VVAIENP 257
I++P
Sbjct: 70 FCGIKHP 76
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
+P+ V+S R +G R V KF G P+ GR PG FTN + F E L++V DP
Sbjct: 71 DPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRV 130
Query: 431 DHQPITEASYVNIPVIALCNTDSPL 505
D Q + EA + IPVIALC+TDSP+
Sbjct: 131 DEQAVVEAGTMGIPVIALCDTDSPI 155
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 612
P VD+ IP N + ++ L++WLLAREVLR+RG +P
Sbjct: 154 PISNVDLIIPTNNRGRKALALIFWLLAREVLRIRGDIP 191
Score = 35.1 bits (77), Expect = 2.0
Identities = 14/47 (29%), Positives = 31/47 (65%)
Frame = +3
Query: 99 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 239
LAA +G + + ME ++Y R DG +++++++T E++ +AA+ +
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMI 67
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 421
S +P D+ V++SRP+ R V KFA G+ + GR PG FTN + + EP++L+V D
Sbjct: 90 SRYDPQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSD 149
Query: 422 PAQDHQPITEASYVNIPVIALCNTDSPL 505
P D Q I EA+ V IP++A +TD+ +
Sbjct: 150 PRTDTQAIKEAAKVGIPIVAFADTDAKI 177
Score = 41.9 bits (94), Expect = 0.017
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 511 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 612
+D+ IP N K S+ L++W LAR++LR R V+P
Sbjct: 180 IDLIIPANNKGRKSLALLYWALARQILRERRVIP 213
Score = 41.1 bits (92), Expect = 0.030
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAAR 233
V L+A H+G + ME++VY+ RA+G +V+++R+ E+L +AA+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAK 87
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 83.0 bits (196), Expect = 8e-15
Identities = 39/86 (45%), Positives = 51/86 (59%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 421
S P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ D
Sbjct: 60 SIEHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISD 119
Query: 422 PAQDHQPITEASYVNIPVIALCNTDS 499
P D Q + EASYVNIPVI++CNTDS
Sbjct: 120 PLLDKQALLEASYVNIPVISVCNTDS 145
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +3
Query: 75 NEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIEN 254
NE D+ K+L H+G M+ YV+K+R+DG ++IN+ +T +K+ LAARA+++IE+
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 255 P 257
P
Sbjct: 64 P 64
Score = 36.3 bits (80), Expect = 0.86
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 511 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 615
+DIAIP N K +S L+ WLL +++L +G L +
Sbjct: 150 IDIAIPGNNKDRYSFALIIWLLTKKILIFKGELTK 184
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 421
SH +PA + V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV D
Sbjct: 91 SHYDPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTD 150
Query: 422 PAQDHQPITEASYVNIPVIALCNTDS 499
PA D Q + EAS + +PV+ALC+T++
Sbjct: 151 PAGDAQVLKEASSIGVPVVALCDTNN 176
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 502 TKIVDIAIPCNTKSSHSIGLMWWLLAREVLRL 597
T VD+ IP N K ++ L++WLLAREV RL
Sbjct: 178 TSNVDLVIPTNNKGRKALSLVYWLLAREVSRL 209
Score = 37.1 bits (82), Expect = 0.49
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAAR 233
+ + LAA H+G + M +VY+ R DG +V++++ T E++ +A++
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASK 88
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
EP D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 63 EPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLA 122
Query: 431 DHQPITEASYVNIPVIALCNTDS 499
D Q + EA + IP+IALC+ ++
Sbjct: 123 DVQAMKEAVKIGIPIIALCDANN 145
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 502 TKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 609
T VD+ IP N K S+ +++WLLARE+L+ RG +
Sbjct: 147 TDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTI 182
Score = 37.5 bits (83), Expect = 0.37
Identities = 13/46 (28%), Positives = 30/46 (65%)
Frame = +3
Query: 114 HLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
H+G + + M+ Y++K R DG +++++++T KL++A + + E
Sbjct: 18 HIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE 63
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 77.8 bits (183), Expect = 3e-13
Identities = 44/81 (54%), Positives = 49/81 (60%)
Frame = -3
Query: 256 GFSMXXXXXXXXTSFSQVRRKLITWVPSARRL*T*VSIWKLTFSAPRWVVAASILVTSSS 77
G SM SFSQV +L PSARRL T SIWKLTFS PRWVVA +ILV SSS
Sbjct: 7 GLSMATMARAASCSFSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSS 66
Query: 76 LRASTSNPPDIVALI*VTTKR 14
LR S PPD++ + T R
Sbjct: 67 LRDRISKPPDMLTWKELRTSR 87
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 248 REPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 427
+ PA++ V+SSR + AVL FA TGA IA RFTPG+ TN + F+E R++IV+DP
Sbjct: 42 KNPAEIPVVSSRQYDYCAVLTFAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIVIDPH 101
Query: 428 QDHQPITEASYVNIPVIA-LCNTDSPLRLWTLL 523
HQ + +A +V+I + + S + LW LL
Sbjct: 102 VSHQAMHKALFVDIAIPGNVRGRHSVVILWCLL 134
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 475 DCFVQHRLPTK--IVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 603
D V H+ K VDIAIP N + HS+ ++W LL R VLRL+G
Sbjct: 99 DPHVSHQAMHKALFVDIAIPGNVRGRHSVVILWCLLCRTVLRLKG 143
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 73.7 bits (173), Expect = 5e-12
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
EP D+ +S R + + +F +TG +AGRF PG TN F EP ++ + DP
Sbjct: 64 EPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRV 123
Query: 431 DHQPITEASYVNIPVIALCNTD 496
D Q + EA+ + +P++ LC+T+
Sbjct: 124 DRQALKEATEIGVPIVGLCDTE 145
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +3
Query: 99 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
LA+ H+G + ME ++Y+ R+DG +V+++R+T E+L +AA+ + E
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE 64
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 478 CFVQHRLPTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 609
C +H T +D+ IP N K ++ L+++LL RE L+ RGV+
Sbjct: 142 CDTEHL--TSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVI 183
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 72.9 bits (171), Expect = 8e-12
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLR 508
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMR 77
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESE 678
P + VDI IP N K +SIG ++WLLAR VL++RG + G + RDPEE++
Sbjct: 75 PMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVM-VDLFFYRDPEEAK 133
Query: 679 K 681
+
Sbjct: 134 E 134
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = +2
Query: 338 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLR 508
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L+
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLK 59
Score = 41.9 bits (94), Expect = 0.017
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +1
Query: 505 KIVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 600
K VD AIPCN ++++SI ++W+LL + VL ++
Sbjct: 59 KYVDCAIPCNNRNNYSIAMIWYLLTKAVLEIK 90
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 421
S+ EP + SSR +G+ KFA GA GRF PG TN + EP +++V D
Sbjct: 133 SNYEPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTD 192
Query: 422 PAQDHQPITEASYVNIPVIALCNTDS 499
P D Q + EA V IPVIA+C++++
Sbjct: 193 PIGDAQAVKEAITVGIPVIAMCDSNN 218
Score = 37.1 bits (82), Expect = 0.49
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 502 TKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 612
T VD+ +P N K ++ +++WLLA E L RG P
Sbjct: 220 TSNVDLVVPTNNKGRKALSVVYWLLANETLDRRGAEP 256
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 230
V L A H+G + ME ++++ R DG +V+++ T E++ AA
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAA 129
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/82 (41%), Positives = 44/82 (53%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P+ V V S++P+ + + F G P+ GR PG TN + LL+V DP D
Sbjct: 75 PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTD 134
Query: 434 HQPITEASYVNIPVIALCNTDS 499
Q I EAS IPVIAL +TDS
Sbjct: 135 FQAINEASLTGIPVIALVDTDS 156
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 499 PTKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 609
PT +D+ IPCN K +S+ L++WLLAR+VLR RG L
Sbjct: 158 PT-FIDLMIPCNNKGRNSLALVFWLLARQVLRERGEL 193
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVN--FQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 239
V + +AA LGA N Q +++ R DG + NL+R E++ +AAR +
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMI 70
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +2
Query: 245 HREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 424
H +++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 65 HTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDP 124
Query: 425 AQDHQPITEASYVNIPVIALCNTDS 499
D Q +TEA+ IPVI + N+D+
Sbjct: 125 QVDAQAVTEATNAGIPVIGIANSDN 149
Score = 37.1 bits (82), Expect = 0.49
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 502 TKIVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 603
T +D+ IP N + ++ ++WLLAREVL +RG
Sbjct: 151 TSRLDVIIPANNRGRGALAAIFWLLAREVLVIRG 184
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +2
Query: 302 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 436
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQM 146
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGT-HVINL 197
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 547 HSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESEK 681
HSIGLMWW+L+REVLRLRG + R + RDPEE+EK
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIM-VDLYFFRDPEEAEK 91
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 421
S+ EP ++ V+ R + KF+ T GR+ PG TN + EP ++++ D
Sbjct: 58 SYYEPNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITD 117
Query: 422 PAQDHQPITEASYVNIPVIALCNTD 496
P D + +A I ++ALC+T+
Sbjct: 118 PIMDKNALHDAYESGITILALCDTN 142
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 511 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRGPAL 627
+D IP N + S S+ L++W+LARE LR RGV+ + L
Sbjct: 148 IDFCIPANNRGSKSLALIYWILAREYLRNRGVIGKDEQL 186
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 269 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 448
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 68 IIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIR 127
Query: 449 EASYVNIPVIALCNTDSPLRL--WTLLSHATPSLPTLLV 559
E S +NIP+I +CNTD+ + W L S+ ++
Sbjct: 128 ELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMI 166
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/77 (42%), Positives = 41/77 (53%)
Frame = +2
Query: 269 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 448
V SSR GQ+AVL FAA G+ P +GRFTPG T+Q+ QP
Sbjct: 48 VTSSRTTGQQAVLSFAAAVGSAPTSGRFTPGTLTDQV-------------------QPSL 88
Query: 449 EASYVNIPVIALCNTDS 499
+ YVN+P IAL + DS
Sbjct: 89 ASQYVNLPPIALYDADS 105
Score = 37.1 bits (82), Expect = 0.49
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1
Query: 514 DIAIPCNTKSSHSIGLMWWLLAREVL 591
DIA PCN K HS+GLM W+LA E L
Sbjct: 111 DIA-PCNIKGVHSVGLMCWVLAGEAL 135
Score = 34.7 bits (76), Expect = 2.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 114 HLGAENVNFQMETYVYKRRADGTHVIN 194
HL N + Q++ YVYK++ DG +VIN
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN 27
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +2
Query: 323 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 460
TGA P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 104 TGAIPTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 YKRRADGTHVINLRRTWEK-LVLAARAVVAIEN 254
Y ++DGT++ L RTWEK L+L A+ VA EN
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANEN 89
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 538 KSSHSIGLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESEK 681
K +HS+GL+WW+LAREVLR+RG + R + RDPEE EK
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDL-YFYRDPEEIEK 47
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 47.2 bits (107), Expect = 5e-04
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 392 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRLWTLLSHATPSLPTLL 556
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P RL + +++ P T L
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLLSQITYPIPGAQTSL 419
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +1
Query: 556 GLMWWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESEK 681
GL+WWLLAREVLRLRG++PR + RDPEE+EK
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVV-VDLFFYRDPEEAEK 41
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 398 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRLWTL 520
P +L++ DP ++ +TEA + IPVIALCNT+S + TL
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITL 241
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNT 206
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.017
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 302 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 463
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 464 NIPVIALC 487
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 40.7 bits (91), Expect = 0.040
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 380 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 505
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNL 197
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 40.3 bits (90), Expect = 0.053
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRL 511
F I+ + P +LI++DP D I EA +NIPVIAL NT++ +L
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQL 247
>UniRef50_Q5TSD3 Cluster: ENSANGP00000028986; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028986 - Anopheles gambiae
str. PEST
Length = 174
Score = 39.5 bits (88), Expect = 0.092
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -2
Query: 674 LSSGSRVEEQINPQHPSAGPRGSTPRSLNTSRANNHHIKP 555
+SSGS ++ P+ P GP +T + N + +NNHH++P
Sbjct: 6 MSSGSESDDYSPPESPPPGPSVNTSSNTNVNSSNNHHLQP 45
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTN 191
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.7 bits (86), Expect = 0.16
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 386 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRLWTLL 523
+F P + I L +QPI EA+ N P+IA C+TDSP++ LL
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALL 106
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 353 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 38.3 bits (85), Expect = 0.21
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +2
Query: 284 PFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 439
P + AV F T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 7 PVSRAAVCCF---TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 398 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
P LIV+DP D + EA +NIPVI LC+T+
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTN 192
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 37.9 bits (84), Expect = 0.28
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQ--METYVYKRRADGTHVINLRRTWEKLVLAARAVVAI 248
+ K++AA HLG +F+ M+ ++Y D H+I+L +T EKL LA + + +
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGV 292
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 395 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRLWT 517
+P L+++L+P ++ I E IP I LC+TD L T
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLT 412
>UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Putative uncharacterized protein - Methanobacterium
thermoautotrophicum
Length = 334
Score = 37.1 bits (82), Expect = 0.49
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = -1
Query: 435 WSCAGSNTIKRRGSRNAA*IWLVKAPGVKRPAIGVAPVCAANFSTAR*PKGRDEMTNTSA 256
WS GS ++R G ++ + + A G PVCA N + +R P R M + +
Sbjct: 119 WSAGGSVEVRRDGPGIEVILYSAEGDEIVSAASGFCPVCAVNIAASRVPSIRRRMASRKS 178
Query: 255 GSRWLRQHEQ 226
+ + ++E+
Sbjct: 179 RNTGMEKYER 188
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 37.1 bits (82), Expect = 0.49
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 395 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
+P LL+V+D ++H I EA +NIPV+A+ +T+S
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNS 195
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.7 bits (81), Expect = 0.65
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 434 HQPITEASYVNIPVIALCNTDSPLRLWTLL 523
+QPI E + N P+IA C+TDSP++ LL
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.7 bits (81), Expect = 0.65
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 434 HQPITEASYVNIPVIALCNTDSPLRLWTLL 523
+QPI E + N P+IA C+TDSP++ LL
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALL 129
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 36.3 bits (80), Expect = 0.86
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDS 191
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 565 WWLLAREVLRLRGVLPRGPALGCCGLICSSTRDPEESEK 681
WW+LAREVLR+RG + R + RDPEE EK
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDL-YFYRDPEEIEK 38
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 398 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
P+++I+ DP + I EA + IPVIA+CNT++
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNA 296
>UniRef50_A7F8B8 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 313
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = -1
Query: 765 SSQSSWTGSNYFWF*LVPTACSLACCSSLFTFFRVTGRRTNQPTTSQRWSTGKHTTKPQH 586
S +S++ +N W PT + C +L T+ + R+T +P+TS + G +T+ +
Sbjct: 222 SYESTFPNANAVWALCEPTIAVMVC--ALPTYRTLLFRKTPEPSTSYQGMRGTRSTRKNN 279
Query: 585 FTCQQPPHQTNRVGRLGVAWDSNV 514
PH+ + + +A +V
Sbjct: 280 IRNTSTPHEMDDISAYSLASTQSV 303
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 34.7 bits (76), Expect = 2.6
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +2
Query: 398 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
P + V+DP ++H ++EA+ + +PV+AL +T++
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNA 207
>UniRef50_A7RFS9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 679
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = -1
Query: 714 PTACSLACCSSLFTFFRVTGRRTNQPTTSQRWSTGKHTTKPQHFTCQQPPHQTNRVGRLG 535
P C + ++ T R R TN T+ W T + T K + T P QT+R +L
Sbjct: 169 PLICEIPTKTACPTL-RPPVRNTNTRQTTTHWVTRQRTVKVRETTTPHTPRQTSRPRQL- 226
Query: 534 VAWDSNVH 511
VA N+H
Sbjct: 227 VAMQDNLH 234
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 34.3 bits (75), Expect = 3.5
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 395 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRLWT 517
+P LL+VL+P ++ + EA +P IA+ +TDS L T
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVT 356
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 34.3 bits (75), Expect = 3.5
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTN 189
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 398 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
P LLIV+DP + + EA + IPV+AL +T+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTN 192
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 371 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
N ++ R P ++ ++DP ++ + EA + I +AL +TDS
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDS 191
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 499
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNT 191
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 33.5 bits (73), Expect = 6.1
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +2
Query: 392 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
R+P +L+V+D ++ + EA +NIP+++L +T+
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTN 190
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 33.1 bits (72), Expect = 8.0
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 398 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 496
P ++ V+DP ++H + EA + IPV+A+ +T+
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTN 194
>UniRef50_A6DJ25 Cluster: Probable ECF sigma factor; n=2;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 196
Score = 33.1 bits (72), Expect = 8.0
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 266 THQRVLDGYDSTSSQNKFFPGTT--QVDHMGTISTSFVD 156
TH V+D + +SQNK G Q+DH+ TIST ++
Sbjct: 81 THSSVVDFFRKQNSQNKRIEGAAKEQIDHINTISTPEIE 119
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 395 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRLWT 517
+P L+++L+P ++ I E IP I LC+TD L T
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLT 402
>UniRef50_O00423 Cluster: Echinoderm microtubule-associated
protein-like 1; n=60; Euteleostomi|Rep: Echinoderm
microtubule-associated protein-like 1 - Homo sapiens
(Human)
Length = 815
Score = 33.1 bits (72), Expect = 8.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -1
Query: 642 QPTTSQRWSTGKHTTKPQHFTCQQPPHQT--NRVGRLGVAWDSNVHNLSGESVLHKAITG 469
Q T + W H +KPQ TC H T + VG V WD + + + S H +G
Sbjct: 540 QGHTDELWGLAIHASKPQFLTCGHDKHATLWDAVGHRPV-WDKIIEDPAQSSGFHP--SG 596
Query: 468 MLTYEASVMG*W 433
+ ++ G W
Sbjct: 597 SVVAVGTLTGRW 608
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 913,023,121
Number of Sequences: 1657284
Number of extensions: 21306004
Number of successful extensions: 58109
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 54985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58055
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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