Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30591
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.4  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   5.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   5.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.4  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   7.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 743 EATTSGFSWYPQPVPWLVVHPFSLSSGSRVEEQI 642
           E+   GF+ Y   + WL   P    +G+  E QI
Sbjct: 704 ESKFIGFTMYTTCIIWLAFVPIYFGTGNAHETQI 737


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 743 EATTSGFSWYPQPVPWLVVHPFSLSSGSRVEEQI 642
           E+   GF+ Y   + WL   P    +G+  E QI
Sbjct: 794 ESKFIGFTMYTTCIIWLAFVPIYFGTGNAHETQI 827


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 742 KQLLLVLAGTHSLFLGLLFIPF 677
           +Q LL   G H++ L LL +PF
Sbjct: 287 EQRLLRNVGVHTVVLDLLQVPF 308


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 677 SLSSGSRVEEQIN--PQHPSAGPRGSTPRSLNTSRANN 570
           SLS+ +     +N   QH S  P GS+P+   +S + +
Sbjct: 42  SLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTS 79


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 743 EATTSGFSWYPQPVPWLVVHPFSLSSGSRVEEQI 642
           E+   GF+ Y   V WL   P    +G+ V  +I
Sbjct: 846 ESKHIGFTMYTTCVIWLAFVPLYFGTGNNVALRI 879


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +2

Query: 413 VLDPAQDHQPITEASYVNIPVIALCNTDSP 502
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 185 CDQLASYLGKTCSGCSCCRSHREPADVFVISSRPFGQRAV 304
           CD      G  CS  S   S  +  + FV  S+ F +R++
Sbjct: 7   CDLATPRTGTNCSSGSSSDSDGQTDEGFVGDSQGFFRRSI 46


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 522 YPMQHQVFPLYWFDVVVV 575
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 522 YPMQHQVFPLYWFDVVVV 575
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,809
Number of Sequences: 438
Number of extensions: 5884
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)