Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30590
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5D54 Cluster: PREDICTED: hypothetical protein;...    45   0.002
UniRef50_UPI00015B59DC Cluster: PREDICTED: hypothetical protein;...    36   1.3  
UniRef50_Q9ZIQ6 Cluster: Bifunctional chemotaxis protein CheF; n...    35   1.7  
UniRef50_A7S5G3 Cluster: Predicted protein; n=1; Nematostella ve...    34   4.0  
UniRef50_Q8ILK9 Cluster: DNA-directed DNA polymerase, putative; ...    33   5.3  
UniRef50_Q32N87 Cluster: MGC80064 protein; n=4; Tetrapoda|Rep: M...    33   7.0  
UniRef50_A2EFF7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_UPI00015B5D54 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 169

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +2

Query: 128 DCKEEYNQSQNGTENFRVHVNGLVIAMMPAES 223
           D  + Y+Q QNGTEN+RV V+GLV  M PA+S
Sbjct: 55  DATDHYDQRQNGTENYRVKVDGLVFIMAPADS 86


>UniRef50_UPI00015B59DC Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 740

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +1

Query: 343 EEKPQTESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQK 483
           EEKP   +E    SE   PTE+A+P S  +   DT   K+   +K+K
Sbjct: 106 EEKPAEAAEAAPASEVTTPTEAASPASPNATSPDTKEAKKKDKSKKK 152


>UniRef50_Q9ZIQ6 Cluster: Bifunctional chemotaxis protein CheF;
           n=24; Epsilonproteobacteria|Rep: Bifunctional chemotaxis
           protein CheF - Helicobacter pylori (Campylobacter
           pylori)
          Length = 804

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 343 EEKPQTESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQK 483
           ++K + + EV  T E PK     AP ++   K+DT  NK  S+  ++
Sbjct: 217 QKKQEAKQEVTPTKETPKTETPKAPKTETKAKADTEENKAPSIGVEQ 263


>UniRef50_A7S5G3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 209

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = -2

Query: 640 ANKCILYHFLNLP-PVNLCSDSC-LSNIAFL**CLFLRIRGSNKLAALISAF-VVVFVYL 470
           ++KC++Y  L L  P+++ S  C +  I +L   +++ +  S  L+   S F + + +YL
Sbjct: 66  SSKCVIYIILYLSCPLSVKSSKCGIYIILYLSCVIYIILYLSCPLSVKSSKFGIYIILYL 125

Query: 469 RTLLYCVVYLILW 431
              L CV+Y+IL+
Sbjct: 126 SCPLCCVIYIILY 138


>UniRef50_Q8ILK9 Cluster: DNA-directed DNA polymerase, putative; n=1;
            Plasmodium falciparum 3D7|Rep: DNA-directed DNA
            polymerase, putative - Plasmodium falciparum (isolate
            3D7)
          Length = 1236

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 679  KRNQSYNI*GKLIANKCILYHFLNLPPVNLCSDSCLSNI 563
            K+N+ Y +   L+ +KCI  H   +   N C   C+SN+
Sbjct: 1006 KKNEIYKVLDNLLKHKCIEIHNEKIKITNFCRSLCISNL 1044


>UniRef50_Q32N87 Cluster: MGC80064 protein; n=4; Tetrapoda|Rep:
           MGC80064 protein - Xenopus laevis (African clawed frog)
          Length = 642

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +1

Query: 358 TESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQ-KRPQRLKSMRLV 516
           ++ +V  T + P+P ESA   +    + + P  + + V K+ K+P+ + S R+V
Sbjct: 404 SDKKVKKTIKKPRPAESARKTNQKEKRGERPRGRPSKVEKEKKKPEMINSRRVV 457


>UniRef50_A2EFF7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 603

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +1

Query: 259 EELLESEGINQLQQQXXXXXXXXXXXXXEEKPQTESEVL-ATSENPKPTESAAPLSDISI 435
           +E  E +    LQ++             EE+PQTE E      E+P P E+ AP S  + 
Sbjct: 284 KEPKEDKTQETLQEEEKTENQDQNSSPNEEQPQTEEETAQPQEESPNPEENPAPESQST- 342

Query: 436 KSDTPHNKEASVNKQKRP 489
             D+P  +E    KQ+ P
Sbjct: 343 -EDSP-KQEEETPKQEEP 358


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,005,970
Number of Sequences: 1657284
Number of extensions: 10959708
Number of successful extensions: 29997
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29932
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)