Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30590
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          23   7.2  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          23   7.2  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          23   7.2  

>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 564 LLFFSDVCSYASGAATN*PH*FQPLWSFLFIYGR 463
           +L F ++C Y SGA    P   +P+  + + Y R
Sbjct: 8   ILLFLNICFYTSGAEAKAPS--RPVQPYHYDYSR 39


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 564 LLFFSDVCSYASGAATN*PH*FQPLWSFLFIYGR 463
           +L F ++C Y SGA    P   +P+  + + Y R
Sbjct: 8   ILLFLNICFYTSGAEAKAPS--RPVQPYHYDYSR 39


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 564 LLFFSDVCSYASGAATN*PH*FQPLWSFLFIYGR 463
           +L F ++C Y SGA    P   +P+  + + Y R
Sbjct: 8   ILLFLNICFYTSGAEAKAPS--RPVQPYHYDYSR 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,320
Number of Sequences: 2352
Number of extensions: 12047
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)