Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30589
(783 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q99436 Cluster: Proteasome subunit beta type-7 precurso... 153 5e-36
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 146 7e-34
UniRef50_Q5TBG5 Cluster: Proteasome (Prosome, macropain) subunit... 130 3e-29
UniRef50_P40306 Cluster: Proteasome subunit beta type-10 precurs... 126 5e-28
UniRef50_P25043 Cluster: Proteasome component PUP1 precursor; n=... 118 1e-25
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 117 4e-25
UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1; En... 113 5e-24
UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8; Acon... 103 4e-21
UniRef50_O62102 Cluster: Proteasome subunit beta type; n=2; Caen... 99 6e-20
UniRef50_A0CN28 Cluster: Proteasome subunit beta type; n=4; Para... 97 3e-19
UniRef50_A2F2T6 Cluster: Proteasome subunit beta type; n=1; Tric... 96 8e-19
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 89 9e-17
UniRef50_Q8T915 Cluster: AT05866p; n=1; Drosophila melanogaster|... 89 1e-16
UniRef50_Q6E6B2 Cluster: Proteasome beta-type subunit-like prote... 85 2e-15
UniRef50_Q7QVB7 Cluster: Proteasome subunit beta type; n=2; Giar... 85 2e-15
UniRef50_Q9UM79 Cluster: Protein serine kinase c17; n=25; Chorda... 84 4e-15
UniRef50_Q42353 Cluster: Proteasome component; n=1; Arabidopsis ... 81 3e-14
UniRef50_UPI000155C3B2 Cluster: PREDICTED: similar to proteasome... 81 4e-14
UniRef50_Q98S31 Cluster: Proteasome subunit beta type; n=1; Guil... 81 4e-14
UniRef50_UPI00015A4F5D Cluster: Proteasome subunit beta type 10 ... 78 3e-13
UniRef50_Q8SQN7 Cluster: Proteasome subunit beta type; n=1; Ence... 77 5e-13
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 61 3e-08
UniRef50_Q5FW50 Cluster: Predicted; n=2; Murinae|Rep: Predicted ... 60 8e-08
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 55 2e-06
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 53 7e-06
UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7; Tryp... 52 2e-05
UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1; ... 50 5e-05
UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1; Tric... 48 2e-04
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 48 3e-04
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 48 4e-04
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 47 6e-04
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 47 6e-04
UniRef50_Q4T9R8 Cluster: Chromosome undetermined SCAF7505, whole... 46 0.001
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 45 0.002
UniRef50_A2E7Z2 Cluster: Proteasome subunit beta type; n=1; Tric... 45 0.002
UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=... 45 0.002
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 44 0.004
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 43 0.008
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 43 0.008
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 43 0.008
UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1; En... 43 0.010
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 43 0.010
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 43 0.010
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 42 0.023
UniRef50_Q8I0U7 Cluster: Proteasome, putative; n=5; Plasmodium|R... 41 0.030
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 41 0.030
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 41 0.030
UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostr... 41 0.040
UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit bet... 40 0.093
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 40 0.093
UniRef50_A7DQ84 Cluster: Proteasome endopeptidase complex; n=1; ... 40 0.093
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 40 0.093
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 39 0.16
UniRef50_UPI00006CF83A Cluster: Proteasome A-type and B-type fam... 38 0.21
UniRef50_Q4UER7 Cluster: Proteasome subunit y, putative; n=4; Pi... 38 0.21
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 38 0.21
UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;... 38 0.28
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 38 0.28
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 38 0.28
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 38 0.28
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 38 0.28
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 38 0.37
UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1; Ajellom... 38 0.37
UniRef50_Q2J9Q3 Cluster: 20S proteasome, A and B subunits; n=23;... 37 0.50
UniRef50_Q4UI67 Cluster: Proteasome subunit beta type; n=3; Piro... 37 0.50
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 37 0.65
UniRef50_Q4TIB8 Cluster: Chromosome undetermined SCAF2267, whole... 36 0.86
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 36 0.86
UniRef50_Q24QW7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q7R0E6 Cluster: GLP_29_53441_54070; n=1; Giardia lambli... 36 1.1
UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome... 36 1.5
UniRef50_Q8T8V8 Cluster: Proteasome subunit beta type; n=13; Neo... 36 1.5
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 36 1.5
UniRef50_Q9ZQR1 Cluster: Putative uncharacterized protein At2g14... 35 2.0
UniRef50_UPI00015A6AB9 Cluster: UPI00015A6AB9 related cluster; n... 35 2.6
UniRef50_A7D1R0 Cluster: Proteasome endopeptidase complex; n=2; ... 35 2.6
UniRef50_A0RXV1 Cluster: 20S proteasome, alpha and beta subunit;... 35 2.6
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 35 2.6
UniRef50_UPI0000004430 Cluster: hypothetical protein LOC446135; ... 34 3.5
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 34 4.6
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 33 6.1
UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8; Magno... 33 6.1
UniRef50_Q86T01 Cluster: Full-length cDNA clone CS0DK007YN03 of ... 33 6.1
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 33 6.1
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 33 6.1
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 33 6.1
UniRef50_O23715 Cluster: Proteasome subunit alpha type-3; n=12; ... 33 6.1
UniRef50_UPI000150A2E0 Cluster: hypothetical protein TTHERM_0027... 33 8.1
UniRef50_Q7QIJ9 Cluster: ENSANGP00000021650; n=1; Anopheles gamb... 33 8.1
UniRef50_A2DYG3 Cluster: F/Y-rich N-terminus family protein; n=1... 33 8.1
UniRef50_Q2GW78 Cluster: Proteasome subunit alpha type; n=4; Pez... 33 8.1
UniRef50_Q60177 Cluster: Proteasome subunit alpha; n=29; Archaea... 33 8.1
UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2... 33 8.1
>UniRef50_Q99436 Cluster: Proteasome subunit beta type-7 precursor;
n=44; Fungi/Metazoa group|Rep: Proteasome subunit beta
type-7 precursor - Homo sapiens (Human)
Length = 277
Score = 153 bits (371), Expect = 5e-36
Identities = 80/150 (53%), Positives = 96/150 (64%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC KIH+++ N+YCCGAGTAADT+MTTQ ++S LEL L TGR V TA +LK+MLF
Sbjct: 72 KNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLF 131
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
RYQG+IGAALVLGGVD TGPH+Y I L +
Sbjct: 132 RYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEE 191
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
++ K+L AAGIFNDLGSGSN+DLCVI
Sbjct: 192 EEAKNLVSEAIAAGIFNDLGSGSNIDLCVI 221
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGAD 223
MA+ V PV GFSF+N +RNA L A++G+ PK KTGTTI G++Y DG++LGAD
Sbjct: 1 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD 60
Query: 224 TRATENTVVSAKTAKK 271
TRATE VV+ K K
Sbjct: 61 TRATEGMVVADKNCSK 76
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/55 (65%), Positives = 39/55 (70%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS DKLPY TMGSGSLAAMAVFE ++ DM EEE K LV +AI LG
Sbjct: 157 YPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLG 211
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 146 bits (353), Expect = 7e-34
Identities = 80/153 (52%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA TLLK+ LF
Sbjct: 68 KNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCII---LMDL*INYHMQPWDLDLLRLWQCLKQVGNVI 606
YQGH+ AALVLGGVD TGPH++ I D M L + +++ + G
Sbjct: 128 SYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLT- 186
Query: 607 *MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
R + L +GIFNDLGSGSNVD+CVI
Sbjct: 187 --RDEGIKLVAEAICSGIFNDLGSGSNVDICVI 217
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 236 ENTVVSAKTAKK 271
E +V+ K +K
Sbjct: 61 EGPIVADKNCEK 72
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS D LP+ATMGSGSLAAM+VFEA +K + +EG KLV +AIC LG
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLG 207
>UniRef50_Q5TBG5 Cluster: Proteasome (Prosome, macropain) subunit,
beta type, 7; n=2; Euteleostomi|Rep: Proteasome
(Prosome, macropain) subunit, beta type, 7 - Homo
sapiens (Human)
Length = 210
Score = 130 bits (315), Expect = 3e-29
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC KIH+++ N+YCCGAGTAADT+MTTQ ++S LEL L TGR V TA +LK+MLF
Sbjct: 72 KNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLF 131
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCI 510
RYQG+IGAALVLGGVD TGPH+Y I
Sbjct: 132 RYQGYIGAALVLGGVDVTGPHLYSI 156
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGAD 223
MA+ V PV GFSF+N +RNA L A++G+ PK KTGTTI G++Y DG++LGAD
Sbjct: 1 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD 60
Query: 224 TRATENTVVSAKTAKK 271
TRATE VV+ K K
Sbjct: 61 TRATEGMVVADKNCSK 76
>UniRef50_P40306 Cluster: Proteasome subunit beta type-10 precursor;
n=28; Eukaryota|Rep: Proteasome subunit beta type-10
precursor - Homo sapiens (Human)
Length = 273
Score = 126 bits (305), Expect = 5e-28
Identities = 67/154 (43%), Positives = 87/154 (56%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K+C+KIH++A +YCCGAG AAD EMTT+ VAS++EL L TGR V T +L++ LF
Sbjct: 68 KSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
RYQGH+GA+L++GGVD TGP +Y + L+
Sbjct: 128 RYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTL 187
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVIRNTG 717
+ + L AGI DLGSG NVD CVI TG
Sbjct: 188 EAAQGLLVEAVTAGILGDLGSGGNVDACVITKTG 221
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Frame = +2
Query: 83 PVPGFSFENFQRNAFLAQ--KGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSA 256
P GFSFEN QRNA L + G P A KTGTTI G+++ DGVILGADTRAT ++VV+
Sbjct: 8 PRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVAD 67
Query: 257 KTAKK 271
K+ +K
Sbjct: 68 KSCEK 72
Score = 41.9 bits (94), Expect = 0.017
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
+PHGS +LP+ +GSG AA+AV E ++ +M E + L+ +A+ + LG
Sbjct: 153 HPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLG 207
>UniRef50_P25043 Cluster: Proteasome component PUP1 precursor; n=19;
Eukaryota|Rep: Proteasome component PUP1 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 261
Score = 118 bits (285), Expect = 1e-25
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC K+H ++ ++C GAGTAADTE TQ + S +EL L+T R V +A +LK+ LF
Sbjct: 58 KNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLF 117
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILM-DL*INYHMQPWDLDLLRLWQCLKQVGNVI*M 612
+YQGHIGA L++ GVD TG H++ I + Y++ L + L+
Sbjct: 118 KYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAM-AVLESHWKQDLT 176
Query: 613 RKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
+++ L+ AGI+NDLGSGSNVD+CV+
Sbjct: 177 KEEAIKLASDAIQAGIWNDLGSGSNVDVCVM 207
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2
Query: 92 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
G SF+N+QRN FLA+ PKAT TGTTIVG+ + +GV++ ADTR+T+ +V+ K K
Sbjct: 3 GLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAK 62
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 117 bits (281), Expect = 4e-25
Identities = 62/151 (41%), Positives = 84/151 (55%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K+C KIHY+A NMYCCGAGTAADT+ T ++S+LEL RL+T R + A L+ L+
Sbjct: 69 KSCSKIHYIAPNMYCCGAGTAADTQWVTDRLSSELELMRLNTNRQSRIAGAIARLREHLY 128
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
+YQGH+GA L+LGG D GP + + L L+
Sbjct: 129 QYQGHVGAHLILGGFDCQGPQLVSVAAHGSFSYLPYATMGSGCLAAIATLESRYRDDLTE 188
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVIR 708
++ L +GI +DLGSGSNVD+CVI+
Sbjct: 189 QEAIDLVTASIESGIVHDLGSGSNVDVCVIK 219
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +2
Query: 92 GFSFENFQRNAFLAQKGF-PAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAK 268
GF+F+ RN L K +P TKTGTTIVG++Y DGV+LGADTRAT T+V+ K+
Sbjct: 13 GFNFDLCLRNNELVSKQIVSSPHFTKTGTTIVGLVYKDGVVLGADTRATAGTIVAEKSCS 72
Query: 269 K 271
K
Sbjct: 73 K 73
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +3
Query: 516 HGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
HGS LPYATMGSG LAA+A E+ ++ D+ E+E LV +I + LG
Sbjct: 156 HGSFSYLPYATMGSGCLAAIATLESRYRDDLTEQEAIDLVTASIESGIVHDLG 208
>UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 113 bits (272), Expect = 5e-24
Identities = 62/154 (40%), Positives = 84/154 (54%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K C K+H LA N+YC GAGTAAD T +A++L + R G+ V+TA T+LKR LF
Sbjct: 56 KACMKLHKLAPNIYCGGAGTAADLTHATNFIATKLGVHRFTIGQMPRVDTAVTMLKRHLF 115
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
Y GHIGA LV+GG D TG H++ + ++ + L N R
Sbjct: 116 PYGGHIGAYLVVGGYDYTGAHLWGVYADGSTSQHNYYSLGSGSIAATTMLDDQWNENLTR 175
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVIRNTG 717
++ L+ AGIFND+GSG V++CVI G
Sbjct: 176 EEGVKLATQAILAGIFNDMGSGGRVNVCVIDKNG 209
Score = 33.9 bits (74), Expect = 4.6
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 KATKTGTTIVGIIYADG--VILGADTRATENTVVSAKTAKK 271
K KTGTTI G++ G V+L D+RAT +V+ K K
Sbjct: 20 KFLKTGTTICGLVCDKGQTVVLACDSRATVGPIVADKACMK 60
>UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 271
Score = 103 bits (248), Expect = 4e-21
Identities = 58/154 (37%), Positives = 84/154 (54%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC K+H ++ N+YC GAG AAD E TT +A+ +EL RL+T + V+ ++L LF
Sbjct: 69 KNCSKLHKISDNIYCAGAGVAADLEHTTLWLANNIELHRLNTKKAPRVQMCISMLVHELF 128
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
+YQG+ AL+LGG D TGPH++ + + L L+Q
Sbjct: 129 KYQGYKQCALILGGFDYTGPHLFSVSPHGSSDSLPFCTMGSGSLNAMTVLEQNYFDGMSV 188
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVIRNTG 717
++ L+ +AGI NDLGSG NVD+ V+ G
Sbjct: 189 EEATELAVKAISAGITNDLGSGGNVDVVVMDKNG 222
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +2
Query: 92 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
G+ F N+ RN+ + Q KTGTTI G++ D V+L ADTRAT+ +V+ K K
Sbjct: 15 GWDFSNYSRNSRI-QNSISGHNYLKTGTTICGVMGRDSVVLAADTRATQGIIVADKNCSK 73
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +3
Query: 513 PHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
PHGS D LP+ TMGSGSL AM V E + M+ EE +L AI LG
Sbjct: 155 PHGSSDSLPFCTMGSGSLNAMTVLEQNYFDGMSVEEATELAVKAISAGITNDLG 208
>UniRef50_O62102 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 277
Score = 99 bits (238), Expect = 6e-20
Identities = 53/150 (35%), Positives = 82/150 (54%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K+C+K+H L ++Y CGAGTAAD + T+ ++ L L L+TGR V TA K+ LF
Sbjct: 75 KHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLF 134
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
YQG+IGA L++GGVD TGPH+Y + + L++ V +
Sbjct: 135 NYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTK 194
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
+ + L + AG+ D SG++++L +I
Sbjct: 195 DEAEKLVQRALEAGMHGDNASGNSLNLVII 224
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 95 FSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
F F N RN + + G APK T TGTTIV + + G+++GAD+RAT +++ K +K
Sbjct: 21 FDFSNCIRNQAMCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEK 79
>UniRef50_A0CN28 Cluster: Proteasome subunit beta type; n=4;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 275
Score = 97.5 bits (232), Expect = 3e-19
Identities = 56/154 (36%), Positives = 80/154 (51%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC+K+H LA N++ GAGTAAD ++L+LQRL+ R V T L LF
Sbjct: 68 KNCEKLHPLAPNIWAAGAGTAADLHHQCAHFNAKLKLQRLNLNRQSRVNEVITKLTAKLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
Y+GHIG AL++GG+D GP + + + + Q L L+ +
Sbjct: 128 PYRGHIGVALIIGGIDSNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTK 187
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVIRNTG 717
++ L+ AGIF+D+GSGSNVD+ I G
Sbjct: 188 QQAIDLAIEAIEAGIFHDMGSGSNVDVVAITKEG 221
Score = 62.9 bits (146), Expect = 9e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 92 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
G+ + N +RN + +GF TKTGTTIVG+I+ GV++ ADTRAT ++V+ K +K
Sbjct: 13 GYDYTNVKRNELMKAQGFKEMPFTKTGTTIVGVIFDGGVVMAADTRATAGSIVADKNCEK 72
>UniRef50_A2F2T6 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 275
Score = 96.3 bits (229), Expect = 8e-19
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K+ K+HY++ N++ CGAG AAD + ++++L L +++TG V+ +L LF
Sbjct: 60 KDEMKLHYISDNIWVCGAGIAADNDNINAVISAKLRLFQMNTGLQPRVDQCTNILASRLF 119
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
+Y G+I AAL++GG+D GP +Y + ++ QP+ + + N +
Sbjct: 120 QYMGYIQAALIVGGIDFQGPQVYQVAPHG---SFSKQPFIAQGSGSLAAISVLENRWHNK 176
Query: 616 KKEKSLSEML---FAAGIFNDLGSGSNVDLCVIRNTGP 720
E EM+ AGI NDLGSGS+V+LCVI+ P
Sbjct: 177 MNEHDCMEMVADAIYAGITNDLGSGSHVNLCVIKRENP 214
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = +2
Query: 92 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GF F N+ RN L K P+ TGTTI I+ GV+LGADTRAT +V+ K K
Sbjct: 6 GFDFSNYARNKSLEPK-LGKPQLLSTGTTIAAAIFDGGVVLGADTRATAGPIVAVKDEMK 64
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 89.4 bits (212), Expect = 9e-17
Identities = 52/152 (34%), Positives = 78/152 (51%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K+C+KIH L+ N++ GAGTAAD + T + LELQ+L R V A ++L L+
Sbjct: 70 KDCEKIHRLSDNIFAAGAGTAADLDHVTSLIEGNLELQKLQMNRKPRVAHAVSMLSDHLY 129
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
+YQG+IGA L++ G D TG ++ + + L L+
Sbjct: 130 KYQGYIGAHLIVAGSDSTGNFVFQVSANGCIMQLPFTSMGSGSLCARSILEARYRDGLTE 189
Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVIRN 711
+ L AGI+NDL SGSNV++ +I+N
Sbjct: 190 SECVELVSDAIRAGIYNDLYSGSNVNILIIKN 221
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/70 (42%), Positives = 36/70 (51%)
Frame = +2
Query: 62 SALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATEN 241
+A E GF FEN A K KTGTTIVG+ D V+LGADTRAT
Sbjct: 6 NAYFSEKSTNGFLFENNIATAPCLSDSTEL-KTVKTGTTIVGVACNDCVVLGADTRATNG 64
Query: 242 TVVSAKTAKK 271
+V+ K +K
Sbjct: 65 PIVADKDCEK 74
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 516 HGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
+G + +LP+ +MGSGSL A ++ EA ++ + E E +LV DAI
Sbjct: 157 NGCIMQLPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAI 200
>UniRef50_Q8T915 Cluster: AT05866p; n=1; Drosophila
melanogaster|Rep: AT05866p - Drosophila melanogaster
(Fruit fly)
Length = 322
Score = 89.0 bits (211), Expect = 1e-16
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTG-RTVPVETAATLLKRML 432
K C+KI L +N++ GAGTA DT+ + +QLEL R++TG R VPV A +++++L
Sbjct: 78 KTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLL 137
Query: 433 FRYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*M 612
FR+ G+I A +++GG D TG H++C L+ +
Sbjct: 138 FRFNGNIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLS 197
Query: 613 RKKEKSLSEMLFAAGIFNDLGSGSNVDLCVIR 708
+ +L+ AAG+ NDL SG V LCV+R
Sbjct: 198 EESACALACDAVAAGMKNDLCSGGKVSLCVVR 229
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 92 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GF+F+N RN L + G P + TGTT+VGI++ GVI+GA++RAT +V +KT +K
Sbjct: 23 GFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRK 82
Score = 41.1 bits (92), Expect = 0.030
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
GS D P+ ++GSG +M++ E+ W D++EE L DA+
Sbjct: 167 GSTDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAV 209
>UniRef50_Q6E6B2 Cluster: Proteasome beta-type subunit-like protein;
n=1; Antonospora locustae|Rep: Proteasome beta-type
subunit-like protein - Antonospora locustae (Nosema
locustae)
Length = 190
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/86 (53%), Positives = 53/86 (61%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC K+H LA ++C GAGTAADTE T S A L L R R V TA L L
Sbjct: 49 KNCFKLHQLADTIHCAGAGTAADTEHLTASCARFLILFRRKYCREPFVHTAQRFLCNHLH 108
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCII 513
RY+G IGAAL+L GVD TGPH+ I+
Sbjct: 109 RYRGEIGAALILAGVDCTGPHLLYIM 134
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 149 APKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
APK KTGTTIVG+ +A GV L ADTRAT VV K K
Sbjct: 15 APK--KTGTTIVGLRFAGGVALFADTRATIGDVVEDKNCFK 53
Score = 33.1 bits (72), Expect = 8.1
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 513 PHGSVDKLPYATMGSGSLAAMA 578
PHGS + Y +MGSGSLAAMA
Sbjct: 135 PHGSSAPMWYTSMGSGSLAAMA 156
>UniRef50_Q7QVB7 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 273
Score = 84.6 bits (200), Expect = 2e-15
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Frame = +1
Query: 250 LGKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM 429
+ KN +K+ + MY GAGTAADT + AS L L TGR V++A L+
Sbjct: 94 MNKNKKKLVCINEQMYMAGAGTAADTAAVGRMAASSLRLHAYKTGRKPLVQSAVKLISDH 153
Query: 430 LFRYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLD---LLRLWQCLKQVGN 600
LFRY G++ A +++ GVD G H+ C I D + QP+ D L L++
Sbjct: 154 LFRYMGYVSAYVIIAGVDYKGAHL-CSI--DAHGSITAQPFVTDGSGRLAAQSMLEKHWK 210
Query: 601 VI*MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVIRNTG 717
+ AG+FNDLGSGS VDL ++R G
Sbjct: 211 PDMEENDAVECACKAVEAGVFNDLGSGSGVDLVILRLDG 249
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 86 VPGFSFENFQRNAFLAQKGFP--APKATKTGTTIVGIIYADGVILGADTRATENTVVSAK 259
V SFEN +RNA L Q + KTGTTI+G+ + GVIL ADTR+T VV K
Sbjct: 37 VAPLSFENCKRNAQLPQDFLAECSKSFKKTGTTIMGLTFKGGVILAADTRSTGGPVVMNK 96
Query: 260 TAKK 271
KK
Sbjct: 97 NKKK 100
Score = 41.5 bits (93), Expect = 0.023
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 516 HGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
HGS+ P+ T GSG LAA ++ E WK DM E + + A+
Sbjct: 183 HGSITAQPFVTDGSGRLAAQSMLEKHWKPDMEENDAVECACKAV 226
>UniRef50_Q9UM79 Cluster: Protein serine kinase c17; n=25;
Chordata|Rep: Protein serine kinase c17 - Homo sapiens
(Human)
Length = 143
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +1
Query: 250 LGKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM 429
L C KIH+++ N+YCCGAGTA DT+MTTQ ++S LEL L TGR V TA + +
Sbjct: 66 LDNGCSKIHFISPNIYCCGAGTA-DTDMTTQLISSNLELHSLSTGRLPRVVTAKSDAEAD 124
Query: 430 LFRYQGHIGAALVLGGVD 483
F+ +GAALVLGGVD
Sbjct: 125 AFQVSRLLGAALVLGGVD 142
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = +2
Query: 83 PVPGFSFENFQR----NAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADT 226
PV GFSF+N +R L +G+ PKA KTGTTI G++Y DG++LGADT
Sbjct: 6 PVGGFSFDNCRRMPSWKPILQMRGYKLPKARKTGTTIAGVVYKDGIVLGADT 57
>UniRef50_Q42353 Cluster: Proteasome component; n=1; Arabidopsis
thaliana|Rep: Proteasome component - Arabidopsis
thaliana (Mouse-ear cress)
Length = 116
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 236 ENTVVSAKTAKK 271
E +V+ K +K
Sbjct: 61 EGPIVADKNCEK 72
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGA-GTAADTEMTTQSVASQLELQRL 375
KNC+KIHY+A N+YCC + T V+SQL L L
Sbjct: 68 KNCEKIHYMAPNIYCCACRNCGLILKQVTDMVSSQLRLHPL 108
>UniRef50_UPI000155C3B2 Cluster: PREDICTED: similar to proteasome
beta 7 subunit proprotein; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to proteasome beta 7
subunit proprotein - Ornithorhynchus anatinus
Length = 206
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/55 (70%), Positives = 41/55 (74%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS DKLPY TMGSGSLAAMAVFE +K DM EEE K+LVRDAI LG
Sbjct: 86 YPHGSTDKLPYVTMGSGSLAAMAVFEDNFKPDMEEEEAKQLVRDAIAAGIYNDLG 140
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/92 (44%), Positives = 48/92 (52%)
Frame = +1
Query: 439 YQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MRK 618
YQG+IGAALVLGGVD TGPH+Y I L + +
Sbjct: 62 YQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDNFKPDMEEE 121
Query: 619 KEKSLSEMLFAAGIFNDLGSGSNVDLCVIRNT 714
+ K L AAGI+NDLGSGSN+DLCVI T
Sbjct: 122 EAKQLVRDAIAAGIYNDLGSGSNIDLCVISKT 153
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYA--DGVILG 217
MA+ V P+ GFSF+N +RNA L A+KG P A KTGTTI G++Y +G++LG
Sbjct: 1 MAAVSVCSPPLGGFSFDNCRRNAALEAEFAKKGHKLPAARKTGTTIAGVVYKVNEGIVLG 60
>UniRef50_Q98S31 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 236
Score = 80.6 bits (190), Expect = 4e-14
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 259 NCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFR 438
+C+KIH++ +N+ CGAGT+AD + + + L + +E +++ LF
Sbjct: 64 SCKKIHFIGNNIGICGAGTSADIQNIINYLKININFLNLEKLKETNLEECTKIIQNFLFN 123
Query: 439 YQGHIGAALVLGGVDRTGPHIYCII---LMDL*INYHMQPWDLDLLRLWQCLKQVGNVI* 609
Y+G I AAL++GG D G ++Y I MD M + + L++ N I
Sbjct: 124 YKGMISAALIIGGFDYYGLNLYSIYPDGSMDKNFFISMGSGSFAAMTI---LEKNYNEIM 180
Query: 610 MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
+ ++S+ AG++NDLGSG +VDL VI
Sbjct: 181 SLESAINISKQAILAGVYNDLGSGGSVDLYVI 212
Score = 40.7 bits (91), Expect = 0.040
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 155 KATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
K KTGTTI+GI + ++L ADTR+T + + + KK
Sbjct: 29 KVDKTGTTIIGICIKNHIVLAADTRSTRGKITNDSSCKK 67
>UniRef50_UPI00015A4F5D Cluster: Proteasome subunit beta type 10
precursor (EC 3.4.25.1) (Proteasome MECl-1) (Macropain
subunit MECl-1) (Multicatalytic endopeptidase complex
subunit MECl-1).; n=3; Danio rerio|Rep: Proteasome
subunit beta type 10 precursor (EC 3.4.25.1) (Proteasome
MECl-1) (Macropain subunit MECl-1) (Multicatalytic
endopeptidase complex subunit MECl-1). - Danio rerio
Length = 283
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
Frame = +2
Query: 92 GFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAK 259
GFSFEN +RNA L ++KG+ AP A KTGTTI G+++ DGVILGADTRAT++ VV+ K
Sbjct: 12 GFSFENTRRNAVLEANLSEKGYSAPNARKTGTTIAGLVFKDGVILGADTRATDDMVVADK 71
Query: 260 TAKK 271
K
Sbjct: 72 NCMK 75
Score = 54.8 bits (126), Expect = 2e-06
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQR--LHTGRTVPVETAATLLKRM 429
KNC KIHY+A N+Y D +T ++A + L+ R ++ + R+
Sbjct: 71 KNCMKIHYIAPNIYSLNIPRLPDRHHSTLNIARLPDHHHSSLNIARLPDHHHSSLNIARL 130
Query: 430 LFRYQGHIGAALVLGGVDR-TGPHI--YCIILMDL*INY-----HMQPWDLDLLRLWQCL 585
+Q + AL+L D T H +C + Y +P L +L L C
Sbjct: 131 PDHHQSSLNIALILQSFDSCTSRHTSSFCNPSLHTRTEYMNMCSKPRPPPLPVLLLMVCR 190
Query: 586 KQVGNVI*MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
+ + ++ K L AGIF DLGSGSNVDLCVI
Sbjct: 191 LRDDLQL---EEAKQLVRDAITAGIFCDLGSGSNVDLCVI 227
>UniRef50_Q8SQN7 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 227
Score = 77.0 bits (181), Expect = 5e-13
Identities = 55/155 (35%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC KIH + + CCGAGTAAD + + +L L + R V + + L
Sbjct: 35 KNCVKIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKVCTQHLH 94
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
+Y G IGAAL++GG+D G H+Y I + L L+ M
Sbjct: 95 KYGGGIGAALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGAIATLESRYRA--MD 152
Query: 616 KKEK-SLSEMLFAAGIFNDLGSGSNVDLCVIRNTG 717
K E L+ AGI NDL SGSN+D+CVI +G
Sbjct: 153 KDEAIDLACDAVKAGILNDLYSGSNIDVCVIDYSG 187
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +2
Query: 161 TKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
TKTGTTIVG+ Y GVIL ADTR+T+ VVS K K
Sbjct: 3 TKTGTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVK 39
Score = 37.9 bits (84), Expect = 0.28
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 498 YLLHYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
Y +H PHGS + + ++GSGSL A+A E+ + R M+++E L DA+
Sbjct: 117 YEIH-PHGSENSALFVSLGSGSLGAIATLESRY-RAMDKDEAIDLACDAV 164
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
K+ YL +YC +G+AADT+ V L++ + R V+TAA L ++++YQ
Sbjct: 58 KVDYLHERIYCLRSGSAADTQTLCSYVRYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQD 117
Query: 448 HIGAALVLGGV-DRTGPHIY 504
++ AA+++ G+ D GP IY
Sbjct: 118 NLSAAVIVAGIDDNEGPSIY 137
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 101 FENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
F+ Q + + F A TGT+I+ ++Y GV++GAD+R T + ++ + K
Sbjct: 2 FKTVQSDIQMLPDPFDYKHAESTGTSIMALVYDGGVLVGADSRTTSGSYIADRAQDK 58
>UniRef50_Q5FW50 Cluster: Predicted; n=2; Murinae|Rep: Predicted -
Mus musculus (Mouse)
Length = 103
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +1
Query: 373 LHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCI 510
L TG V TA +LK+MLFRYQG+IGA LVL VD TGPH+Y I
Sbjct: 31 LFTGHLPRVVTANRMLKQMLFRYQGYIGATLVLRRVDSTGPHLYSI 76
Score = 54.4 bits (125), Expect = 3e-06
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 294 VLLWSRNSS*H*NDNTICCFTIGVAALTYWTYCTSRNCCHTAETNAISLSRPYRGCSGFG 473
+LLWS +S H DN F +G AL + + + + + Y G +
Sbjct: 6 LLLWSWDSCKHRYDNPAYFFQLG--ALLFTGHLPRVVTANRMLKQMLFRYQGYIGATLVL 63
Query: 474 RC*QNRSSYLLH-YPHGSVDKLPYATMGSGSLAAMAVFE 587
R + +L YPHGS DK PY T+GSGSLAAMAVFE
Sbjct: 64 RRVDSTGPHLYSIYPHGSTDKSPYVTVGSGSLAAMAVFE 102
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
KI Y+ ++C +G AADT++ T+ V ++ GR V TAA L + L+ Y+
Sbjct: 50 KIDYIHDRIFCLRSGAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKD 109
Query: 448 HIGAALVLGGVD-RTGPHIYCIIL 516
+ A++++ G D GP I+ + L
Sbjct: 110 SMSASIIVAGWDPYKGPQIFTLPL 133
Score = 37.5 bits (83), Expect = 0.37
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 167 TGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
TGTTI+ +IY G+I+GAD+R + V+ + A K
Sbjct: 16 TGTTIMAVIYDGGLIIGADSRTSSGQFVADRCADK 50
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
K+ + ++CC +G+AADT+ +V QL + V TAA+L K M +RY+
Sbjct: 67 KLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYRE 126
Query: 448 HIGAALVLGGVD-RTGPHIYCI 510
+ A +++ G D + G +Y +
Sbjct: 127 DLMAGIIIAGWDPQEGGQVYSV 148
Score = 37.9 bits (84), Expect = 0.28
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 155 KATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKSTT*H 286
+ TGTTI+ + + GV+LGAD+R T + ++ + K T H
Sbjct: 29 REVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIH 72
>UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 283
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
K+ L +YCC +G+AADT+ + V++ L + G V V TAA L +M + +
Sbjct: 87 KLTKLTEKIYCCRSGSAADTQALAERVSNYLGSYQTDIGADVNVATAANLFHKMCYVNRW 146
Query: 448 HIGAALVLGGVDR-TGPHIYCI 510
+I A +++ G D G +Y I
Sbjct: 147 NISAGIIVAGYDPINGGSVYSI 168
Score = 36.3 bits (80), Expect = 0.86
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 155 KATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
+A GTTI+ + Y GV+L AD+R + T V + + K T
Sbjct: 49 EAVSLGTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLT 89
>UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 200
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K KI + S++ AGT D + + + + TG ++PV++ ATL +LF
Sbjct: 41 KQTWKIVEIDSHIAATIAGTVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLILF 100
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCI 510
+Y+ + +++GGVD GP ++ +
Sbjct: 101 QYRPILSVQMLIGGVDSDGPSLFSV 125
>UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 256
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
KI LA NM AG AAD + ++++ ++L + + + V A+ +L L+RY+G
Sbjct: 86 KILPLAPNMIGTMAGGAADCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKG 145
Query: 448 H-IGAALVLGGVDRTGPHIYCI 510
+ + ++ G D TGPHI+ I
Sbjct: 146 YNLSIGSMICGYDNTGPHIFYI 167
Score = 34.7 bits (76), Expect = 2.6
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 LKFQ*NLSNHEMASALVP-EIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYA 199
LK + + + E AL P +P P +N + L+ P A GTT + IY
Sbjct: 6 LKPRDEVESEETTKALEPAHVPDPCQFVKN---HISLSYTNEPGKMAAVHGTTTLSFIYN 62
Query: 200 DGVILGADTRATENTVVSAKTAKK 271
G+++ D+RAT + ++T K
Sbjct: 63 GGIVVAVDSRATGGQFIFSQTVMK 86
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 LGKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM 429
L KN +K+H + ++ AG D + +++ + E L GR + V A +L +
Sbjct: 44 LSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQLGREIRVRGLAKILSLI 103
Query: 430 LFRYQ-GHIGAALVLGGVDRTGPHIYCI 510
L+ Y+ + +V+GG D GP IY +
Sbjct: 104 LYSYKLAPLMTEVVVGGFDEKGPQIYVL 131
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRML- 432
KN +K+ + + AG D ++ + + ++LEL RL +P+E ATLL ML
Sbjct: 37 KNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLN 96
Query: 433 -FRYQGHIGAALVLGGVDRTGPHIYCI 510
+Y ++ L++GG+D T PH++ I
Sbjct: 97 QVKYMPYM-VQLLVGGID-TAPHVFSI 121
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 LGKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM 429
L K +K+ Y + GAG D + T+ + +++ + TG+ + V AA LL +
Sbjct: 32 LSKQAKKV-YKINKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSVI 90
Query: 430 LFRYQ-GHIGAALVLGGVDRTGPHIYCI 510
L++Y+ + ++ GGVD GP +Y +
Sbjct: 91 LYQYKVMPFISEILFGGVDEKGPQLYVL 118
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
KI L N+Y C +G+AAD+++ + V L + G+ V+ +A L++ + + +
Sbjct: 45 KITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKN 104
Query: 448 HIGAALVLGGVDR-TGPHIYCIIL 516
+ L++GG D+ G IY I L
Sbjct: 105 MLQTGLIVGGWDKYEGGKIYGIPL 128
Score = 38.3 bits (85), Expect = 0.21
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
GTTI+G+ Y GV+LGAD+R + V+ + + K T
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKIT 47
Score = 36.7 bits (81), Expect = 0.65
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
G+V + P+A GSGS F+ WK +M +EE ++LV A+
Sbjct: 130 GTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAV 172
>UniRef50_Q4T9R8 Cluster: Chromosome undetermined SCAF7505, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7505,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 86
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGAD 223
MA+ V PV GF F+N +RNA L + G+ P A KTGTTI G+++
Sbjct: 1 MAALAVRTAPVGGFGFQNCRRNAHLEAEATKVGYSFPSARKTGTTICGLVFKMAWCSELT 60
Query: 224 TRATENTVVSAKTAKKSTT*HP 289
+ +TA +STT P
Sbjct: 61 PKPLREWWWPTRTAPRSTTSPP 82
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQR--LHT---GRTVPVETAATLLKRML 432
K+ + +Y C AG+ + + V + L Q+ LH G V TAA ++ L
Sbjct: 28 KVLPITDKIYTCIAGSVSHAQFLVNEVRAHLMTQQMDLHANLNGMDPMVATAANIISIYL 87
Query: 433 FRYQGHIGAALVLGGVDRTGPH 498
+Y+ + AA +LGGVD TG H
Sbjct: 88 HKYREFLHAAFILGGVDNTGFH 109
>UniRef50_A2E7Z2 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 216
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRT--VPVETAATLLKRMLFRY 441
KI + ++ G AADT+ ++V + L + T + A+ +++ ++ RY
Sbjct: 45 KITEIQPKIFAARCGNAADTQFLARAVKNYLNALNITRENTDDSTILVASNVIRSLIVRY 104
Query: 442 QGHIGAALVLGGVDRTGPHIYCI 510
+ ++ A +++GG D GP +Y I
Sbjct: 105 RQYLSAGVIVGGWDSAGPQVYSI 127
>UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=35;
Eukaryota|Rep: Proteasome component PRE3 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 215
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
K+ + ++CC +G+AADT+ V LEL G T ETAA++ K + + +
Sbjct: 52 KLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYG-TPSTETAASVFKELCYENKD 110
Query: 448 HIGAALVLGGV-DRTGPHIYCIIL 516
++ A +++ G D+ +Y I L
Sbjct: 111 NLTAGIIVAGYDDKNKGEVYTIPL 134
Score = 37.9 bits (84), Expect = 0.28
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKKSTT*H 286
GT+I+ + + DGVILGAD+R T ++ + K T H
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVH 57
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
GSV KLPYA GSGS + ++ +M++EE ++ ++
Sbjct: 136 GSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSL 178
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
K+ L +YC +G+AAD + A QLEL + V AA +++ + ++Y+
Sbjct: 53 KLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYRE 112
Query: 448 HIGAALVLGGVD-RTGPHIY 504
+ A L++ G D R G +Y
Sbjct: 113 DLSAHLMVAGWDQREGGQVY 132
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 149 APKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
AP + TTI+ + YADGV+LGAD+R + T V+ + + K T
Sbjct: 42 APPRARAQTTIMAVKYADGVVLGADSRTSTGTYVANRASDKIT 84
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 307 AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH-IGAALVLGGVD 483
AG AAD + ++ L L G + V A+ ++ + F Y+ + + A +++ G D
Sbjct: 125 AGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD 184
Query: 484 RTGPHIYCI 510
+ GPH+Y +
Sbjct: 185 KDGPHLYYV 193
Score = 38.3 bits (85), Expect = 0.21
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 155 KATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
K GTT +G IY GVIL D+RA++ + ++++ KK
Sbjct: 74 KMMNRGTTTLGFIYQGGVILAVDSRASQGSYIASQEVKK 112
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 43.2 bits (97), Expect = 0.008
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 LGKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM 429
+ K+ +K++ + M AG AD + + V +++ L L + + V T A LL +
Sbjct: 32 MSKSGKKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELDSNISPKVWTVAKLLSYI 91
Query: 430 LF-RYQGHIGAALVLGGVDRTGPHIYCI 510
L+ R A +V+GG+D G H+Y +
Sbjct: 92 LYERRLFPYYAEIVVGGLDEEGSHLYSL 119
Score = 33.1 bits (72), Expect = 8.1
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +3
Query: 513 PHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
P G++ + Y +GSG+ A+++ E+ +K+DM+ +E L ++
Sbjct: 121 PIGAIIEDDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSV 165
>UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
KI ++ ++ C AGTAA +E V L + TG V AAT +K +++ +
Sbjct: 47 KIRMVSDSIGMCTAGTAAHSETIGDYVKHALRMYTAQTGEEPTVLAAATSIKNIIYGNKS 106
Query: 448 HIGAALVLGGVDR-TGPHIYCII 513
+ +++V GG D G +Y I+
Sbjct: 107 FLSSSVVCGGYDPVNGATLYRIL 129
Score = 37.1 bits (82), Expect = 0.50
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTTI+G++Y GV+LGAD R + ++V + K
Sbjct: 14 GTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNK 47
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 164 KTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKSTT*HP 289
KTGTT VGI ADGV++ D RA+ +VS+K +K HP
Sbjct: 47 KTGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHP 88
Score = 33.5 bits (73), Expect = 6.1
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K+ QK+ + AG+ + + ++ ++ L G+ + +E +TL +L
Sbjct: 78 KDVQKVEEVHPRGALTIAGSVSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLR 137
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCI 510
+I +LGGVD G HIY I
Sbjct: 138 SGAFYI-VQPILGGVDDEGSHIYSI 161
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 289 NMYCCG--AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG-HIGA 459
N Y G AG AAD + +++ + L L R + V A+ LL ML+ Y+G +
Sbjct: 95 NPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSV 154
Query: 460 ALVLGGVDRTGPHIYCI 510
++ G D TGP +Y +
Sbjct: 155 GTMIAGWDETGPGLYYV 171
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 41.5 bits (93), Expect = 0.023
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 QKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQ 444
QK + S++ AG AAD + + Q L L + V A+ +L +L++Y+
Sbjct: 70 QKYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVAAASKMLANILYQYR 129
Query: 445 GH-IGAALVLGGVDRTGPHIYCI 510
+ + ++ G D+TGPHI+ +
Sbjct: 130 NYNLSVGSMICGYDKTGPHIFYV 152
Score = 34.3 bits (75), Expect = 3.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 104 ENFQRNAFLAQKGFPAPKAT---KTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
E + L K PKA K GTT + +I +G+I+ D+RAT +S+ + +K
Sbjct: 13 ETKKERVILPCKELSLPKALTEHKHGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQK 71
>UniRef50_Q8I0U7 Cluster: Proteasome, putative; n=5; Plasmodium|Rep:
Proteasome, putative - Plasmodium falciparum (isolate
3D7)
Length = 282
Score = 41.1 bits (92), Expect = 0.030
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTTI+GIIY +GV+L D+R + T +S K ++K
Sbjct: 30 GTTIIGIIYDNGVMLACDSRTSSGTFISNKCSRK 63
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 41.1 bits (92), Expect = 0.030
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 167 TGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
TGTTI+ I Y DGV++GAD+R + VS++ K T
Sbjct: 9 TGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLT 45
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICC 653
GS+ + +A GSGS + W+ M+ EEG + VR+A+ C
Sbjct: 125 GSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSC 169
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 41.1 bits (92), Expect = 0.030
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K QKI + + G+GT AD + + + ++L+L+ L++ RT+ V AA LL +L+
Sbjct: 30 KRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAANLLSHLLY 89
Query: 436 RYQGHIG--AALVLGGVDRTGPHIYCI 510
+ + ++ L+ G ++ IY +
Sbjct: 90 QNRFYLNPLGLLIAGPINSKEFGIYSL 116
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 173 TTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
TTI+GI DGV+L +D +A+ +V K A+K
Sbjct: 2 TTIIGIKARDGVVLASDKQASMGNIVEDKRAQK 34
>UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus lucimarinus CCE9901
Length = 246
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 149 APKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
A +A TGTTIV YA GV+LGAD+R + VS + + K
Sbjct: 10 ASEAPHTGTTIVACEYAGGVVLGADSRVSTGIYVSNRASDK 50
>UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit beta
type 6, NTN hydrolase fold; n=3; Cryptosporidium|Rep:
Pre3p/proteasome regulatory subunit beta type 6, NTN
hydrolase fold - Cryptosporidium parvum Iowa II
Length = 248
Score = 39.5 bits (88), Expect = 0.093
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 164 KTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
+TGTTIV + Y DG++L AD R + +++ + A+K T
Sbjct: 49 ETGTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKIT 86
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 39.5 bits (88), Expect = 0.093
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 155 KATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
+ ++GTT VG+I +D VIL AD RAT +++++ KK
Sbjct: 20 RVVRSGTTTVGLIASDHVILAADKRATAGFLIASRRVKK 58
>UniRef50_A7DQ84 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 210
Score = 39.5 bits (88), Expect = 0.093
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
GSV+K Y T GSGS A + E ++ D+ EE KK+ A+ ++ +G
Sbjct: 130 GSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIG 181
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 39.5 bits (88), Expect = 0.093
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VGI+ +DGV+L AD RA+ +V AK K
Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTK 43
Score = 38.3 bits (85), Expect = 0.21
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRML- 432
KN KIH + ++ GAG D + + ++ +L +G+ + V+ ATLL ML
Sbjct: 39 KNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLN 98
Query: 433 -FRYQGHIGAALVLGGVDRTGPHIYCIILM 519
R ++ A ++GG D P +Y + +M
Sbjct: 99 GARMLPYL-AWFLVGGFDEK-PRLYSVDMM 126
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 513 PHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
P GS+ + YA +G+G+ A+AV + G++ D+ EE KKL A+
Sbjct: 124 PLGSLIEDNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQAL 168
>UniRef50_UPI00006CF83A Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 289
Score = 38.3 bits (85), Expect = 0.21
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 486 NRSSYLLHYP-HGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLV 635
N YL H +G+ + + + G G+ +FE GW+ DM+E+E K+LV
Sbjct: 183 NGKPYLAHIDLYGTYIETNHVSTGFGNYLCGPLFEKGWRADMSEQEAKQLV 233
>UniRef50_Q4UER7 Cluster: Proteasome subunit y, putative; n=4;
Piroplasmida|Rep: Proteasome subunit y, putative -
Theileria annulata
Length = 294
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
GTTI+G+ + DGVIL AD R + +V+ + A+K T
Sbjct: 68 GTTIIGMKFMDGVILVADGRTSSGQIVANRVARKIT 103
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
G ++ + GSGS A V EAG+ RDM+ EEG KL +A+
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNAL 168
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VG+I D VIL D RA+ +V+ K AKK
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKK 39
Score = 33.9 bits (74), Expect = 4.6
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
K +K++ + + AG+ D + + + ++ +L ++ TGR +P ATLL +L
Sbjct: 35 KEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILH 94
Query: 436 RYQGH-IGAALVLGGVD 483
+ +++GG D
Sbjct: 95 SSRMFPFLTQIIIGGYD 111
>UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;
Corynebacterineae|Rep: 20S proteasome, A and B subunits
- Mycobacterium sp. (strain KMS)
Length = 304
Score = 37.9 bits (84), Expect = 0.28
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 38 NLSNHEMASAL--VPEIPVPGFSFENFQRNA------FLAQKGFPAPKATKTGTTIVGII 193
+LS H S VP +P+ SF + R F A GTTIV +
Sbjct: 13 DLSRHSSHSTTRGVPSVPMDLSSFSDMLRRQAPHLLPFRGDASLTPTDAVPHGTTIVALK 72
Query: 194 YADGVILGADTRATENTVVSAKTAKK 271
+ GV++ D RAT+ +++++ +K
Sbjct: 73 FPGGVVMAGDRRATQGNMIASRDVQK 98
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 37.9 bits (84), Expect = 0.28
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 164 KTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
KTGTT VGI DGVIL ADT+A+ + +V +K
Sbjct: 4 KTGTTTVGIRVKDGVILAADTQASLDHMVETLNIRK 39
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 37.9 bits (84), Expect = 0.28
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VGI++ D V+L AD RAT V+ K KK
Sbjct: 15 GTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKK 48
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 37.9 bits (84), Expect = 0.28
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 513 PHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
P GS+ + YA +GSG+ A+ + E G+ +DM+ ++ KKL A+
Sbjct: 125 PLGSLIEDDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAV 169
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 37.9 bits (84), Expect = 0.28
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VG++ DGV++ + RAT +++K AKK
Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKK 44
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 37.5 bits (83), Expect = 0.37
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 140 GFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
G P + TGTT+V Y DG+I+GADTR +
Sbjct: 6 GAPKMRDFVTGTTVVSFRYRDGIIMGADTRGS 37
>UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1;
Ajellomyces capsulatus NAm1|Rep: Proteasome component
PRE3 - Ajellomyces capsulatus NAm1
Length = 174
Score = 37.5 bits (83), Expect = 0.37
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
GS+ K YA GSGS +A W+ M EEEG + V++++
Sbjct: 91 GSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSL 133
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 179 IVGIIYADGVILGADTRATENTVVSAKTAKKSTT*HPT 292
+ G + DGVILGAD+R T ++ + K T H T
Sbjct: 6 VTGFLGEDGVILGADSRTTTGAYIANRVTDKLTQVHDT 43
>UniRef50_Q2J9Q3 Cluster: 20S proteasome, A and B subunits; n=23;
Actinomycetales|Rep: 20S proteasome, A and B subunits -
Frankia sp. (strain CcI3)
Length = 304
Score = 37.1 bits (82), Expect = 0.50
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 131 AQKGFPAPKATKT-GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
A+ G P P GTTIV + + GVI+ D RAT+ +++ + +K
Sbjct: 68 ARSGLPGPVTEVAHGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEK 115
>UniRef50_Q4UI67 Cluster: Proteasome subunit beta type; n=3;
Piroplasmida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 270
Score = 37.1 bits (82), Expect = 0.50
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 119 NAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
N ++ Q+ K K GTT +G I+ GVIL D+RA+ +VS + K
Sbjct: 39 NTYMTQEARNV-KNFKKGTTTLGFIFDQGVILAVDSRASMGPIVSTQNVSK 88
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 36.7 bits (81), Expect = 0.65
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 140 GFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
GF + TGTT++ + Y GV++G D+R + + ++++ K T
Sbjct: 13 GFYPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKIT 58
>UniRef50_Q4TIB8 Cluster: Chromosome undetermined SCAF2267, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2267,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 202
Score = 36.3 bits (80), Expect = 0.86
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTV 393
K K+ + ++CC AG+ AD + T++ QL R HT + V
Sbjct: 30 KTINKVIKVHDRIFCCMAGSLADAQAVTKAAKFQLSFHRSHTSKPV 75
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 36.3 bits (80), Expect = 0.86
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 164 KTGTTIVGIIYADGVILGADTRAT-ENTVVSAKTAKK 271
KTGTTIVG+ DGV++ +D RA+ V+S K +K
Sbjct: 58 KTGTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQK 94
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/85 (22%), Positives = 38/85 (44%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KN QK+ + N +G+ + +S+ ++ L G + ++ +T+ +L
Sbjct: 90 KNVQKVEEIQPNAALSISGSVGGAQSFIRSLRAEANLYEARRGEYMSIDALSTMASNLL- 148
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCI 510
R +LGGVD G H++ +
Sbjct: 149 RGGPFFRVVPILGGVDDDGGHVFSL 173
>UniRef50_Q24QW7 Cluster: Putative uncharacterized protein; n=1;
Desulfitobacterium hafniense Y51|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 430
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 77 EIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTV 247
E P GFS + +A+LA K A TGT + +I+A I+G TR E V
Sbjct: 96 EPPFNGFSVLRHEFDAWLADKAREAGAVLVTGTVVDDVIHAGNRIVGVKTRRDEGDV 152
>UniRef50_Q7R0E6 Cluster: GLP_29_53441_54070; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_29_53441_54070 - Giardia lamblia
ATCC 50803
Length = 209
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 310 GTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY--QGHIGAALVLGGVD 483
G D T + L+L+ L G T V+++A ++ L R +G ++ GGVD
Sbjct: 48 GEDGDVLQFTDYIKHSLKLRSLRQGYTPTVKSSANFIRTELARAIREGPYNVYVITGGVD 107
Query: 484 RTGPHIY 504
GP +Y
Sbjct: 108 AAGPQLY 114
>UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6; n=1; Apis
mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6 - Apis
mellifera
Length = 209
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 167 TGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
TGT+I+ + GV++GAD+RAT +S + A K T
Sbjct: 31 TGTSIMACEFDGGVVIGADSRATTGAYISNRFADKLT 67
>UniRef50_Q8T8V8 Cluster: Proteasome subunit beta type; n=13;
Neoptera|Rep: Proteasome subunit beta type - Drosophila
melanogaster (Fruit fly)
Length = 315
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT +G Y GVIL AD+RAT + ++T +K
Sbjct: 71 GTTTLGFKYRGGVILCADSRATSGQYIGSQTMRK 104
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VGI+ GV+L AD RA +++ K KK
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKK 43
>UniRef50_Q9ZQR1 Cluster: Putative uncharacterized protein
At2g14490; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g14490 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 142
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 200 DGVILGADTRATENTVVSAKTAKK 271
DGVILGADTRATE +V+ K K
Sbjct: 109 DGVILGADTRATEGPIVADKNCGK 132
>UniRef50_UPI00015A6AB9 Cluster: UPI00015A6AB9 related cluster; n=1;
Danio rerio|Rep: UPI00015A6AB9 UniRef100 entry - Danio
rerio
Length = 264
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 158 ATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKSTT*HPTCIV 301
A GTT +G I+ DGVI ADTRA+ +V K H +V
Sbjct: 48 AQSHGTTTLGFIFQDGVIAAADTRASCKGLVCCPITHKIMPIHSHLVV 95
>UniRef50_A7D1R0 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum lacusprofundi ATCC 49239|Rep: Proteasome
endopeptidase complex - Halorubrum lacusprofundi ATCC
49239
Length = 268
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
++ +K+H L ++ AG AD Q + RL G V VET + +
Sbjct: 64 ESIEKLHKLDDHLGTASAGHVADARQLIDLARRQSQGNRLRYGEPVGVETLTKFVTDHIQ 123
Query: 436 RYQGH-----IGAALVLGGVDRTGPHIY 504
GAAL++GG+D P ++
Sbjct: 124 ENTQRGGTRPYGAALLIGGIDNGEPRLF 151
>UniRef50_A0RXV1 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 195
Score = 34.7 bits (76), Expect = 2.6
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 NCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFR 438
N KI + + AG AD + + L R+ +P+++ A L + +
Sbjct: 27 NTMKIQRIDDHAGLTLAGGVADAQNIVDVLRYHASLHRIRKQGPIPIKSLARLTSLIFHQ 86
Query: 439 YQGH-IGAALVLGGVDRTGPHIYCI 510
+G+ A +++GG D GP +Y I
Sbjct: 87 NRGYPFMADILMGGFDAVGPALYNI 111
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VGI DGVIL AD RA+ V+ K +K
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRK 47
>UniRef50_UPI0000004430 Cluster: hypothetical protein LOC446135;
n=2; Danio rerio|Rep: hypothetical protein LOC446135 -
Danio rerio
Length = 375
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKKSTT*HPTCIV 301
GTT +G I+ DGVI ADTRA+ +V K H +V
Sbjct: 77 GTTTLGFIFQDGVIAAADTRASCKGLVCCPITHKIMPIHSHLVV 120
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKKSTT*HPTCIVVEQEQQLTLK*QHNLL 349
G T++G+ D VIL ADTR + + + + K + CI+ Q +K H+LL
Sbjct: 38 GGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSLL 97
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 173 TTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
TTIV + YA GV++ D RAT +++++ +K
Sbjct: 102 TTIVALTYAGGVLMAGDRRATMGNIIASRHIEK 134
>UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8;
Magnoliophyta|Rep: 20S proteasome beta subunit - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 238
Score = 33.5 bits (73), Expect = 6.1
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 546 TMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
++GSGS A V ++G+K DM+ EE +L R AI
Sbjct: 148 SVGSGSPYAYGVLDSGYKYDMSIEEASELARRAI 181
>UniRef50_Q86T01 Cluster: Full-length cDNA clone CS0DK007YN03 of
HeLa cells of Homo sapiens; n=4; Eutheria|Rep:
Full-length cDNA clone CS0DK007YN03 of HeLa cells of
Homo sapiens - Homo sapiens (Human)
Length = 201
Score = 33.5 bits (73), Expect = 6.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT + + GVI+ AD+RAT ++++T KK
Sbjct: 57 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKK 90
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 33.5 bits (73), Expect = 6.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 513 PHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
P GS+ + Y G+G+ A + E +KR M+ EE KK +A+
Sbjct: 122 PLGSIIEEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEAL 166
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT VGI DGV+ ++ RA+ +V+ K A+K
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEK 41
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 33.5 bits (73), Expect = 6.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
GTT + + GVI+ AD+RAT ++++T KK
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKK 37
>UniRef50_O23715 Cluster: Proteasome subunit alpha type-3; n=12;
Magnoliophyta|Rep: Proteasome subunit alpha type-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 249
Score = 33.5 bits (73), Expect = 6.1
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +1
Query: 253 GKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVE-----TAATL 417
G N ++IH + + AG AAD S+ G VPV+ A+ +
Sbjct: 62 GSN-RRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYV 120
Query: 418 LKRMLFRYQGHIGAALVLGGVDRTGPHIYCI 510
L+ + G ++LGG DR GP +Y I
Sbjct: 121 HLCTLYWWLRPFGCGVILGGYDRDGPQLYMI 151
>UniRef50_UPI000150A2E0 Cluster: hypothetical protein
TTHERM_00274470; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00274470 - Tetrahymena
thermophila SB210
Length = 1168
Score = 33.1 bits (72), Expect = 8.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 361 PIVKQQIVLSFQCQLLFLLHNNTCWMLSSGFFGSFCRDNCIFSGSCVSS*NNAVCVYYTN 182
P ++Q LS Q +L C+ +GFFG+ C+ NCI SC+ +N C Y++
Sbjct: 737 PNQQEQYCLSCPKQFPYLFQGR-CYC-GNGFFGTNCQQNCI--SSCILCEDNLSCDKYSD 792
>UniRef50_Q7QIJ9 Cluster: ENSANGP00000021650; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021650 - Anopheles gambiae
str. PEST
Length = 370
Score = 33.1 bits (72), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 256 CRDNC-IFSGSCVSS*NNAVCVYYTNNC 176
C+DN + SGSC S N AVC YT +C
Sbjct: 29 CKDNGGLASGSCSSRTNQAVCCVYTKSC 56
>UniRef50_A2DYG3 Cluster: F/Y-rich N-terminus family protein; n=1;
Trichomonas vaginalis G3|Rep: F/Y-rich N-terminus family
protein - Trichomonas vaginalis G3
Length = 1587
Score = 33.1 bits (72), Expect = 8.1
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 41 LSNHEMASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIV 184
LS E A A P++PV +F+ F+R+ L K P PK +K+ +T+V
Sbjct: 9 LSTTEEAQAF-PDVPVVPENFQ-FKRSYLLGSKITPTPKKSKSASTVV 54
>UniRef50_Q2GW78 Cluster: Proteasome subunit alpha type; n=4;
Pezizomycotina|Rep: Proteasome subunit alpha type -
Chaetomium globosum (Soil fungus)
Length = 267
Score = 33.1 bits (72), Expect = 8.1
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +1
Query: 307 AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLL---KRMLFRYQGH--IGAALVL 471
AG +D + + + Q RL GR++PV T ++ ++ ++ G G L++
Sbjct: 75 AGLTSDARVLSNFMKQQCLGHRLTFGRSMPVRTLVEIIGSKAQINTQHYGKRPYGVGLLV 134
Query: 472 GGVDRTGPHIY 504
GVD GPH++
Sbjct: 135 AGVDDHGPHLF 145
>UniRef50_Q60177 Cluster: Proteasome subunit alpha; n=29;
Archaea|Rep: Proteasome subunit alpha - Methanococcus
jannaschii
Length = 261
Score = 33.1 bits (72), Expect = 8.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 149 APKATKTGTTIVGIIYADGVILGADTRATENTV 247
A +A + GTT +GI DGV+L D R T V
Sbjct: 28 AREAVRRGTTAIGIACKDGVVLAVDRRITSKLV 60
>UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2;
n=2; Filobasidiella neoformans|Rep: Probable proteasome
subunit beta type-2 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 224
Score = 33.1 bits (72), Expect = 8.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 534 LPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
+PYA G G +++ + W DM+++EG L+R I
Sbjct: 128 VPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCI 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,869,449
Number of Sequences: 1657284
Number of extensions: 16080058
Number of successful extensions: 42954
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 40683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42919
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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