Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30589
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99709-4|CAB16855.1|  277|Caenorhabditis elegans Hypothetical pr...    99   2e-21
AC006672-3|AAK84540.1|  239|Caenorhabditis elegans Proteasome be...    37   0.019
Z79754-8|CAB02097.1|  248|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p...    30   1.6  
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.      30   1.6  
Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U41510-5|AAK39384.3|  453|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z99709-4|CAB16855.1|  277|Caenorhabditis elegans Hypothetical
           protein C47B2.4 protein.
          Length = 277

 Score =   99 bits (238), Expect = 2e-21
 Identities = 53/150 (35%), Positives = 82/150 (54%)
 Frame = +1

Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
           K+C+K+H L  ++Y CGAGTAAD +  T+ ++  L L  L+TGR   V TA    K+ LF
Sbjct: 75  KHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLF 134

Query: 436 RYQGHIGAALVLGGVDRTGPHIYCIILMDL*INYHMQPWDLDLLRLWQCLKQVGNVI*MR 615
            YQG+IGA L++GGVD TGPH+Y        + +               L++   V   +
Sbjct: 135 NYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTK 194

Query: 616 KKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
            + + L +    AG+  D  SG++++L +I
Sbjct: 195 DEAEKLVQRALEAGMHGDNASGNSLNLVII 224



 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 25/59 (42%), Positives = 37/59 (62%)
 Frame = +2

Query: 95  FSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
           F F N  RN  + + G  APK T TGTTIV + +  G+++GAD+RAT   +++ K  +K
Sbjct: 21  FDFSNCIRNQAMCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEK 79


>AC006672-3|AAK84540.1|  239|Caenorhabditis elegans Proteasome beta
           subunit protein 1 protein.
          Length = 239

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +2

Query: 140 GFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
           GF   +   TGTT++ + Y  GV++G D+R +  + ++++   K T
Sbjct: 13  GFYPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKIT 58


>Z79754-8|CAB02097.1|  248|Caenorhabditis elegans Hypothetical
           protein F25H2.9 protein.
          Length = 248

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 149 APKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTAKKS 274
           A +A K G+T +GI  ++GV+L A+ R+T   +V+    K S
Sbjct: 27  AIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKIS 68


>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
           protein F55H2.6 protein.
          Length = 1247

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 689 LTCALFVTLGPGPISKELMKKLNVEGGKK 775
           L C   V L P PI+  + KK N + GKK
Sbjct: 818 LNCLFSVVLDPSPIAANVAKKANKKNGKK 846


>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
           protein F55H2.6 protein.
          Length = 1247

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 689 LTCALFVTLGPGPISKELMKKLNVEGGKK 775
           L C   V L P PI+  + KK N + GKK
Sbjct: 818 LNCLFSVVLDPSPIAANVAKKANKKNGKK 846


>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
          Length = 1247

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 689 LTCALFVTLGPGPISKELMKKLNVEGGKK 775
           L C   V L P PI+  + KK N + GKK
Sbjct: 818 LNCLFSVVLDPSPIAANVAKKANKKNGKK 846


>Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical
           protein T01D3.4 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 295 TCWMLSSGFFGSFCRDNCIFSGSCVS 218
           +CW++SSGF     RDNC    S +S
Sbjct: 136 SCWIMSSGFTAVTYRDNCWVYYSIIS 161


>Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical
           protein F40G12.2 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1

Query: 256 KNCQKIHYLASNMYCC 303
           +NC+K+H+L+SN + C
Sbjct: 214 ENCEKVHFLSSNFWNC 229


>U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical
           protein C42D4.3 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +3

Query: 195 TQTALF*ELTQEPLKIQLSRQKLPKNPLLSIQHVL 299
           T+TA F   +QE  +   S Q LP+NPL ++Q++L
Sbjct: 216 TETAEFRRPSQEHFRAPTSPQ-LPQNPLFAVQNLL 249


>U41510-5|AAK39384.3|  453|Caenorhabditis elegans Hypothetical
           protein ZC449.2 protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/63 (20%), Positives = 28/63 (44%)
 Frame = -2

Query: 692 STLEPEPKSLNIPAANSISDKLFSFFLIHITFPTCFKHCHSRKRSRSHGCIW*FIYRSMR 513
           +T+    +  N+  ++++S+      L H+T   C  +C S+   +  GC+    +R   
Sbjct: 14  TTVNATWQCFNVHPSHAVSNSDAIAELFHVTAGECLNYCISQAAQKGDGCVSVVFHRKFS 73

Query: 512 IMQ 504
             Q
Sbjct: 74  TCQ 76


>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
           protein Y39D8B.1 protein.
          Length = 1372

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 231 ALVSAPRITPSAYIIPTIVVPVLVALGAGNPF 136
           A++ +P I   A + P  +VP++++ G G PF
Sbjct: 701 AVILSPVIMSPAILTPLCMVPIILSPGVGLPF 732


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,944,966
Number of Sequences: 27780
Number of extensions: 389193
Number of successful extensions: 1100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)