Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30589
(783 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40580.2 68418.m04925 20S proteasome beta subunit B (PBB2) (P... 146 2e-35
At5g40580.1 68418.m04924 20S proteasome beta subunit B (PBB2) (P... 146 2e-35
At3g27430.2 68416.m03429 20S proteasome beta subunit B (PBB1) id... 145 3e-35
At3g27430.1 68416.m03428 20S proteasome beta subunit B (PBB1) id... 145 3e-35
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 47 2e-05
At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative... 43 3e-04
At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1) (... 43 3e-04
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 33 0.16
At3g63360.1 68416.m07131 defensin-related contains weak similari... 29 3.5
At1g56450.1 68414.m06492 20S proteasome beta subunit G1 (PBG1) (... 29 4.6
At5g23575.1 68418.m02766 transmembrane protein, putative similar... 28 8.0
At5g08500.1 68418.m01007 transmembrane CLPTM1 family protein con... 28 8.0
At3g53690.1 68416.m05929 zinc finger (C3HC4-type RING finger) fa... 28 8.0
At3g24200.1 68416.m03037 monooxygenase family protein low simila... 28 8.0
>At5g40580.2 68418.m04925 20S proteasome beta subunit B (PBB2)
(PRCFC) identical to 20S proteasome beta subunit PBB2
[Arabidopsis thaliana] GI:3421104, cDNA proteasome
subunit prcfc GI:2511575
Length = 274
Score = 146 bits (353), Expect = 2e-35
Identities = 80/153 (52%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA TLLK+ LF
Sbjct: 68 KNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCII---LMDL*INYHMQPWDLDLLRLWQCLKQVGNVI 606
YQGH+ AALVLGGVD TGPH++ I D M L + +++ + G
Sbjct: 128 SYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLT- 186
Query: 607 *MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
R + L +GIFNDLGSGSNVD+CVI
Sbjct: 187 --RDEGIKLVAEAICSGIFNDLGSGSNVDICVI 217
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 236 ENTVVSAKTAKK 271
E +V+ K +K
Sbjct: 61 EGPIVADKNCEK 72
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS D LP+ATMGSGSLAAM+VFEA +K + +EG KLV +AIC LG
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLG 207
>At5g40580.1 68418.m04924 20S proteasome beta subunit B (PBB2)
(PRCFC) identical to 20S proteasome beta subunit PBB2
[Arabidopsis thaliana] GI:3421104, cDNA proteasome
subunit prcfc GI:2511575
Length = 274
Score = 146 bits (353), Expect = 2e-35
Identities = 80/153 (52%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA TLLK+ LF
Sbjct: 68 KNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCII---LMDL*INYHMQPWDLDLLRLWQCLKQVGNVI 606
YQGH+ AALVLGGVD TGPH++ I D M L + +++ + G
Sbjct: 128 SYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLT- 186
Query: 607 *MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
R + L +GIFNDLGSGSNVD+CVI
Sbjct: 187 --RDEGIKLVAEAICSGIFNDLGSGSNVDICVI 217
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 236 ENTVVSAKTAKK 271
E +V+ K +K
Sbjct: 61 EGPIVADKNCEK 72
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS D LP+ATMGSGSLAAM+VFEA +K + +EG KLV +AIC LG
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLG 207
>At3g27430.2 68416.m03429 20S proteasome beta subunit B (PBB1)
identical to 20S proteasome beta subunit PBB1 (PBB1)
GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2),
677-692 (1998)); contains Pfam profile: PF00227
proteasome A-type and B-type;
Length = 273
Score = 145 bits (351), Expect = 3e-35
Identities = 80/153 (52%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA TLLK+ LF
Sbjct: 68 KNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCII---LMDL*INYHMQPWDLDLLRLWQCLKQVGNVI 606
YQGH+ AALVLGGVD TGPH++ I D M L + +++ + G
Sbjct: 128 SYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLT- 186
Query: 607 *MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
R + L +GIFNDLGSGSNVD+CVI
Sbjct: 187 --RDEGIKLVAESICSGIFNDLGSGSNVDICVI 217
Score = 81.0 bits (191), Expect = 8e-16
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 236 ENTVVSAKTAKK 271
E +V+ K +K
Sbjct: 61 EGPIVADKNCEK 72
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS D LP+ATMGSGSLAAM+VFEA +K + +EG KLV ++IC LG
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLG 207
>At3g27430.1 68416.m03428 20S proteasome beta subunit B (PBB1)
identical to 20S proteasome beta subunit PBB1 (PBB1)
GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2),
677-692 (1998)); contains Pfam profile: PF00227
proteasome A-type and B-type;
Length = 267
Score = 145 bits (351), Expect = 3e-35
Identities = 80/153 (52%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 256 KNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF 435
KNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA TLLK+ LF
Sbjct: 68 KNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLF 127
Query: 436 RYQGHIGAALVLGGVDRTGPHIYCII---LMDL*INYHMQPWDLDLLRLWQCLKQVGNVI 606
YQGH+ AALVLGGVD TGPH++ I D M L + +++ + G
Sbjct: 128 SYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLT- 186
Query: 607 *MRKKEKSLSEMLFAAGIFNDLGSGSNVDLCVI 705
R + L +GIFNDLGSGSNVD+CVI
Sbjct: 187 --RDEGIKLVAESICSGIFNDLGSGSNVDICVI 217
Score = 81.0 bits (191), Expect = 8e-16
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 235
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 236 ENTVVSAKTAKK 271
E +V+ K +K
Sbjct: 61 EGPIVADKNCEK 72
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +3
Query: 510 YPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWYIQ*LG 674
YPHGS D LP+ATMGSGSLAAM+VFEA +K + +EG KLV ++IC LG
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLG 207
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 447
KI L N+Y C +G+AAD+++ + V L + G+ V+ +A L++ + + +
Sbjct: 45 KITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKN 104
Query: 448 HIGAALVLGGVDR-TGPHIYCIIL 516
+ L++GG D+ G IY I L
Sbjct: 105 MLQTGLIVGGWDKYEGGKIYGIPL 128
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 170 GTTIVGIIYADGVILGADTRATENTVVSAKTAKKST 277
GTTI+G+ Y GV+LGAD+R + V+ + + K T
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKIT 47
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 519 GSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
G+V + P+A GSGS F+ WK +M +EE ++LV A+
Sbjct: 130 GTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAV 172
>At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative
very strong similarity to SP|O23717 Proteasome subunit
beta type 5 precursor (EC 3.4.25.1) (20S proteasome
subunit E) (Proteasome epsilon chain) {Arabidopsis
thaliana}
Length = 273
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 289 NMYCCG--AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG-HIGA 459
N Y G AG AAD + +++ + L L R + V A+ LL ML+ Y+G +
Sbjct: 95 NPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSV 154
Query: 460 ALVLGGVDRTGPHIYCI 510
++ G D TGP +Y +
Sbjct: 155 GTMIAGWDETGPGLYYV 171
Score = 35.5 bits (78), Expect = 0.040
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 44 SNHEMASAL--VPEIPVPGFS-FENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVIL 214
SN EM P +P + F+ FQ+ A K PA GTT + I+ +GV++
Sbjct: 19 SNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVK--PAK-----GTTTLAFIFKEGVMV 71
Query: 215 GADTRATENTVVSAKTAKK 271
AD+RA+ +S+++ KK
Sbjct: 72 AADSRASMGGYISSQSVKK 90
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 546 TMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
++GSGS A V ++G+K DM+ EE +L R +I
Sbjct: 184 SVGSGSPYAYGVLDSGYKFDMSVEEASELARRSI 217
>At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1)
(PRCE) identical to GB:O23717; identical to cDNA
proteasome subunit prce GI:2511595
Length = 274
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 289 NMYCCG--AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG-HIGA 459
N Y G AG AAD + +++ + L L R + V A+ LL ML+ Y+G +
Sbjct: 95 NPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSV 154
Query: 460 ALVLGGVDRTGPHIYCI 510
++ G D TGP +Y +
Sbjct: 155 GTMIAGWDETGPGLYYV 171
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 546 TMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 647
++GSGS A V ++G+K DM+ EE +L R +I
Sbjct: 184 SVGSGSPYAYGVLDSGYKYDMSVEEASELARRSI 217
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 86 VPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSAKTA 265
VP F + +K K K GTT + I+ GV++ AD+RA+ +S+++
Sbjct: 30 VPSFDLPRTKEFDGFQKKAKDMLKHAK-GTTTLAFIFKGGVMVAADSRASMGGYISSQSV 88
Query: 266 KK 271
KK
Sbjct: 89 KK 90
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +1
Query: 253 GKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVE-----TAATL 417
G N ++IH + + AG AAD S+ G VPV+ A+ +
Sbjct: 62 GSN-RRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYV 120
Query: 418 LKRMLFRYQGHIGAALVLGGVDRTGPHIYCI 510
L+ + G ++LGG DR GP +Y I
Sbjct: 121 HLCTLYWWLRPFGCGVILGGYDRDGPQLYMI 151
>At3g63360.1 68416.m07131 defensin-related contains weak similarity
to defensin [Capsicum annuum] gi|1200228|emb|CAA65045
Length = 85
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 367 ATPIVKQQIVLSFQCQL-LFLLHNNTCWMLSSG--FFGSFCRDNCIFSGSCVSS*NNAVC 197
+T ++KQ + +C+ LL N CW+ +G + C+ SG CVS + +C
Sbjct: 18 STGLMKQGDAQAQKCEWECKLLPNFPCWLKGAGEGLCDNLCKYEGAISGVCVSDPHRCLC 77
Query: 196 VYYTNNCS 173
CS
Sbjct: 78 RNRKPGCS 85
>At1g56450.1 68414.m06492 20S proteasome beta subunit G1 (PBG1)
(PRCH) identical to 20S proteasome beta subunit (PBG1)
GI:3421123 [Arabidopsis thaliana]; identical to cDNA
proteasome subunit prch GI:2511597
Length = 246
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 167 TGTTIVGIIYADGVILGADTRATENTVVSAKTAKK 271
TGT+IV I Y DGV++ +D + + + K ++
Sbjct: 30 TGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIER 64
>At5g23575.1 68418.m02766 transmembrane protein, putative similar to
cleft lip and palate transmembrane protein 1 [Homo
sapiens] GI:4039014; contains Pfam profile PF05602:
Cleft lip and palate transmembrane protein 1 (CLPTM1)
Length = 593
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = -3
Query: 349 QQIVLSFQCQL---LFLLHNNTCWML--SSG 272
+ +VL+F CQ L+LL N+T WM+ SSG
Sbjct: 368 KSVVLNFICQFVIFLYLLDNDTSWMILASSG 398
>At5g08500.1 68418.m01007 transmembrane CLPTM1 family protein
contains Pfam profile PF05602: Cleft lip and palate
transmembrane protein 1 (CLPTM1)
Length = 590
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = -3
Query: 349 QQIVLSFQCQL---LFLLHNNTCWML--SSG 272
+ +VL+F CQ L+LL N+T WM+ SSG
Sbjct: 366 KSVVLNFICQFIIFLYLLDNDTSWMILASSG 396
>At3g53690.1 68416.m05929 zinc finger (C3HC4-type RING finger)
family protein contains a Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 320
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 351 FTIGVAALTYWTYCTSRNCCHTAETNAISLSRPYRGCSG 467
F IG + Y C S+ + N +S+ P GCSG
Sbjct: 128 FRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSG 166
>At3g24200.1 68416.m03037 monooxygenase family protein low
similarity to VisC [Escherichia coli][GI:216629];
contains Pfam profile: PF01360 Monooxygenase
Length = 507
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 483 QNRSSYLLHYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAICCWY 659
+N +++ P+G + LP S + M EA ++ MNE++ K V DA+ Y
Sbjct: 275 ENYTAWQRFLPNGPIALLPIGDKFSNIVWTMDPKEASDRKLMNEDDFIKAVNDALDSGY 333
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,283
Number of Sequences: 28952
Number of extensions: 361713
Number of successful extensions: 961
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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