Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30588
(734 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 159 5e-40
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 77 3e-15
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 71 1e-13
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 67 3e-12
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 49 8e-07
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 46 4e-06
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 41 2e-04
SPCC584.11c |||Svf1 family protein Svf1|Schizosaccharomyces pomb... 31 0.23
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 30 0.39
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.39
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 2.8
SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces... 27 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.7
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 3.7
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 26 4.8
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 6.4
SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces... 26 6.4
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 26 6.4
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 25 8.5
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 25 8.5
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 25 8.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 159 bits (385), Expect = 5e-40
Identities = 83/147 (56%), Positives = 92/147 (62%)
Frame = +3
Query: 84 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEA++K
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 264 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQ 443
+ P P P+ EKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 444 IMFETFNTPAMYVAIQAVLSL*TSGRT 524
I+FETFN PA YVAIQAVLSL SGRT
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRT 148
Score = 125 bits (301), Expect = 8e-30
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYN+LRVAPEEHP LLTEAPLNPK+NR +
Sbjct: 59 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREK 118
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 76.6 bits (180), Expect = 3e-15
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAKXXXXXX 281
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EA+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 282 XXXXXXXXXLTGMTWRR-FGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQIMFET 458
+ I S + P P EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 459 FNTPAMYVAIQAVLSL*TSGRT 524
N PA+ ++Q VL+L S RT
Sbjct: 132 LNVPALSFSLQPVLALYASART 153
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-DLRVAPEEHPVLLTEAPLNPKANRRE 433
RG+L ++ PIE GI+ NW DME+IW + + + L PEEHP+LLTE PL N+ +
Sbjct: 66 RGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEK 123
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 71.3 bits (167), Expect = 1e-13
Identities = 55/170 (32%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Frame = +3
Query: 90 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEARAK 263
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA A
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 264 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQ 443
+ PR + P P EKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 444 IMFETFNTPAMYVAIQAVLSL*TSGRTNR--YRAGTPATGVLPTNGGPIL 587
MFE + +YVAIQAVLSL G ++ +G T ++P +L
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171
Score = 66.5 bits (155), Expect = 4e-12
Identities = 24/57 (42%), Positives = 42/57 (73%)
Frame = +2
Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
R +L +KYP+E+GI+ ++++M ++W +TF+ L++ P +LLTE P+NP ANR +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREK 118
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 66.9 bits (156), Expect = 3e-12
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +2
Query: 275 TLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANR 427
+L YPI HG + NWD ME+ W + + LR PE+H LLTE PLNP NR
Sbjct: 89 SLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENR 139
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYVGDE 251
+++DNG+G K G+AG+DAP VFP+++ R G G + K SY+ +
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASK 58
Score = 38.7 bits (86), Expect = 8e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 405 PSTPRPTGEKMTQIMFETFNTPAMYVAIQAVLSL*TSGRTNR 530
P P E +IMFE+FN +Y+A+QAVL+L S +++
Sbjct: 132 PLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK 173
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 48.8 bits (111), Expect = 8e-07
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 9/205 (4%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAKX 266
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE +
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 267 XXXXXXXXXXXXXXL------TGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPS-TPRPT 425
+ T TW R G+ V+P + + PS P+
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWER-GLKEKLQ--VNP--TEYAMMITEPSWNPQSV 116
Query: 426 GEKMTQIMFETFNTPAMYVAIQAVLSL*TSGRTNR--YRAGTPATGVLPTNGGPILRKG* 599
+++ + FE + PA Y+ QAV + ++ G+ V P G I+RKG
Sbjct: 117 RQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGI 176
Query: 600 ALRPTANPLRSGNLSPCSRTLHMKY 674
+ A + N+ T+++++
Sbjct: 177 FKQSLAGDFLNANIEQLFNTMNIEF 201
Score = 34.7 bits (76), Expect = 0.014
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 296 HGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+GI+ +W+ W L+V P E+ +++TE NP++ R++
Sbjct: 74 NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQ 119
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 46.4 bits (105), Expect = 4e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANR 427
KS G + +K I +G V NWD +W + L+ P EHP+L+TE NP NR
Sbjct: 58 KSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENR 114
Score = 42.3 bits (95), Expect = 7e-05
Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 2/172 (1%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAKX 266
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYIYKSNPGME 64
Query: 267 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQI 446
+T W R+G+ T +P + + + P K +
Sbjct: 65 IKNAIRNGWVENWDVTVDLW-RYGLEQQLKT--NPLEHPILITEPFDNPPE-NRVKTLET 120
Query: 447 MFETFNTPAMYVAIQAVLSL*TSGRTNR--YRAGTPATGVLPTNGGPILRKG 596
MFE+ PA Y+A Q + SG+ G + V G +L+KG
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKG 172
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNP 415
P E +++NWD ME++ +TF L + EHP+ +TE NP
Sbjct: 86 PFERNVISNWDLMEQVLDYTFLK-LGIDRMEHPICMTEPLANP 127
Score = 39.5 bits (88), Expect = 5e-04
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 6/168 (3%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAKXXXXXX 281
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ +
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 282 XXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLP-STPRPTGEKMTQIMFET 458
++ ++ T + R + P + P MT+++FE
Sbjct: 83 ARSPFERNVISNWDLME-QVLDYTFLKLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 459 FNTPAMYVAIQAVLSL*TSGRTNR----YRAGTPATGVLPT-NGGPIL 587
+N P++ I + S + + + G A+ V+P NG IL
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERIL 189
>SPCC584.11c |||Svf1 family protein Svf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 30.7 bits (66), Expect = 0.23
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 541 PARYRLVRPDVYSESTAWMATYMAGVLNVSNMIWVIFSPV 422
P RL R DV +E +W+ ++ GV I+ FSPV
Sbjct: 316 PLGRRLQRIDVLAEIPSWLKGFVHGVSGTKPFIYQYFSPV 355
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -2
Query: 319 IPVSDDSVFDGVFEGQDTSFALASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAK 140
+P + +V +TSFAL ++ S PT + P +E + +S+PA
Sbjct: 63 LPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPNVEADVKSLSSTPAA 122
Query: 139 PALHIP 122
P L+ P
Sbjct: 123 PQLNSP 128
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.39
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 244 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 83
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = -2
Query: 514 DVYSESTAWMATYMAGVLNVSNMIWVIFSPVGLGVEGSLSEQDWVF 377
D + W+ A + +++ IF + G EG++ + WVF
Sbjct: 2066 DTVAPGRVWITNVAAWIYAIASASGSIFFSLNFGEEGAVQTRIWVF 2111
>SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 316
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 473 HVRRHPSRALAVDVRSYQPVSCWDSG---DGCSPNQRWPHLTEGLS 601
H+ P +A+ RS + DSG D SP +R+PHL++G S
Sbjct: 271 HLTSTPRTPIALQRRSVHHLH--DSGISRDSSSPFKRFPHLSDGSS 314
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 247 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 131
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 26.6 bits (56), Expect = 3.7
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = -1
Query: 278 GSGYLFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 105
G G F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 49 GLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 147 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 251
G+ PRA F ++ P H G+++ M KD G+E
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEE 534
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 129 TYRSHCLLPTRQLLRRTS*ISEI 61
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 663 GGFANTGLSSQIARDLRWGGVLNPSVRWGHRWLGEHPSPES 541
G + L++++A + +G ++P+ + W+G HPS S
Sbjct: 14 GKVGHESLAAKLA-EAGYGFEVDPNTPYAELWMGSHPSGPS 53
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 25.8 bits (54), Expect = 6.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTF 349
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 463 LNVSNMIWVIFSPVGLGVEGSLSEQDWVF 377
L +S + W V + V GSL EQ+W F
Sbjct: 83 LFISWIRWDAIYFVDMAVNGSLFEQEWAF 111
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 237 KSPSVPYRPSRPDGGAFPRSRGTR 166
K+PS PY SRP A S TR
Sbjct: 312 KAPSYPYSSSRPSASASLASSPTR 335
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 612 TANPLRSGNLSPCSRTLHMKYL 677
T +P R G L+P ++LH +Y+
Sbjct: 301 TLSPQRIGFLTPADKSLHSRYI 322
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,421,402
Number of Sequences: 5004
Number of extensions: 82526
Number of successful extensions: 245
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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