Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30588
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 174 6e-44
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 174 6e-44
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 174 6e-44
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 174 6e-44
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 174 6e-44
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 174 6e-44
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 173 1e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 165 3e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 135 3e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 131 6e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 131 6e-31
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 130 1e-30
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 130 1e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 130 1e-30
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 89 4e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 65 4e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 44 8e-05
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.091
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.091
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.9
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 174 bits (423), Expect = 6e-44
Identities = 92/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 174 bits (423), Expect = 6e-44
Identities = 92/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (423), Expect = 6e-44
Identities = 92/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 174 bits (423), Expect = 6e-44
Identities = 92/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (423), Expect = 6e-44
Identities = 92/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 174 bits (423), Expect = 6e-44
Identities = 92/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 91/149 (61%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (416), Expect = 4e-43
Identities = 89/149 (59%), Positives = 97/149 (65%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKM 437
+K + P P P+ EKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 438 TQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
TQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 165 bits (401), Expect = 3e-41
Identities = 88/147 (59%), Positives = 94/147 (63%)
Frame = +3
Query: 84 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 264 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQ 443
+ P P P+ EKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 444 IMFETFNTPAMYVAIQAVLSL*TSGRT 524
IMFETFNTPAMYV IQAVLSL SGRT
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRT 148
Score = 128 bits (310), Expect = 3e-30
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LR+APEEHPVLLTEAPLNPK+NR +
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 135 bits (327), Expect = 3e-32
Identities = 74/131 (56%), Positives = 79/131 (60%)
Frame = +3
Query: 132 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAKXXXXXXXXXXXXXXXL 311
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 312 TGMTWRRFGIIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQIMFETFNTPAMYVAIQ 491
+ P P P+ EKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 492 AVLSL*TSGRT 524
AVLSL SGRT
Sbjct: 125 AVLSLYASGRT 135
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 46 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKI 334
+SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKI 334
+SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 130 bits (314), Expect = 1e-30
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN+LRVAPEEHPVLLTEAPLNPKANR +
Sbjct: 16 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 75
Score = 81.4 bits (192), Expect = 6e-16
Identities = 49/105 (46%), Positives = 53/105 (50%)
Frame = +3
Query: 210 MVGMGQKDSYVGDEARAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQS 389
MVGMGQKDSYVGDEA++K + P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 390 CSLRLPSTPRPTGEKMTQIMFETFNTPAMYVAIQAVLSL*TSGRT 524
P P+ EKMTQIMFETFNTPAMYVAIQAVLSL SGRT
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 105
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKI 334
+SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDM 325
+SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 88.6 bits (210), Expect = 4e-18
Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYND-LRVAPEEHPVLLTEAPLNPKANR 427
+S RG+ +++YP+EHGIV NW DMEKIW + F D L++ PEEHPVLLT+APLNP NR
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNR 120
Score = 80.2 bits (189), Expect = 1e-15
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAKXXXXXX 281
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 282 XXXXXXXXXLTGMTWRRFG--IIPSTMTCVSPPRNTQSCSLRLPSTPRPTGEKMTQIMFE 455
+ I + P + + P P E+ +I FE
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLT-DAPLNPLKNRERSAEIFFE 129
Query: 456 TFNTPAMYVAIQAVLSL*TSGRT 524
TFN PA+Y+ +QAVLSL +GRT
Sbjct: 130 TFNVPALYIQMQAVLSLYATGRT 152
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYND-LRVAPEEHPVLLTEAPLNPKANRRE 433
R +L + YP+++GIV NWDDM +W HTF + L + P+E +LLTE PLNP +NR +
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREK 122
Score = 62.9 bits (146), Expect = 2e-10
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEARAKXXXX 275
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 276 XXXXXXXXXXXLTGMTWRRFG-IIPSTMTCVSPPRNTQSCSLRL---PSTPRPTGEKMTQ 443
W + T + + C L L P P EKM Q
Sbjct: 69 DINYPMDNGIV---RNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQ 125
Query: 444 IMFETFNTPAMYVAIQAVLSL*TSG 518
+MFE + ++YVA+QAVL+L G
Sbjct: 126 VMFEQYGFNSIYVAVQAVLTLYAQG 150
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = +2
Query: 275 TLKYPIEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANR 427
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NR
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENR 130
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 221
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 222 GQKDSYVGDEARAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMTCVSPPRNTQSCSLR 401
D ++GDEA + + + L
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 402 LPSTPRPTGEKMT-QIMFETFNTPAMYVAIQAVLSL*TSGRTNRYRAGTPATGVLPTNG 575
P P + T +IMFE+FN P +Y+A+QAVL+L T+ +R TG++ +G
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLAL-TASWNSREANERSLTGLVIDSG 178
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +2
Query: 290 IEHGIVTNWDDMEKIWHHTFYNDLRVAPEEHPVLLTEAPLNPKANRRE 433
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A R +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREK 141
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 417 RPTGEKMTQIMFETFNTPAMYVAIQAVLSL*TSGRTN--RYRAGTPATGVLPTNGG 578
R EK+T+IMFE F PA Y++ VLS GRT+ +G T V+P G
Sbjct: 136 RARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDG 191
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 185
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTF 349
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTF 349
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 182 RGKAPPSGRDGRYGTEGLLCRR*GKSKRG 268
RGKA +GRDGR G EG R + +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 443 DHVRNIQHARHVRRHPSRALAVDVRSYQPVSCWDSGDG 556
D V + + R PS LAV++R + V WD G G
Sbjct: 2298 DAVILVSKTKGRRTQPSEHLAVEIRDKRVVVHWDIGSG 2335
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 565 QPTVAPSYGRVKHSAPPQIPCDLGT*ARVREPST 666
+ T PS +V H+ PP I + G+ +V +PST
Sbjct: 585 ESTDMPSTSQVFHTLPPSILIEPGSTPKVAQPST 618
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 443 DHVRNIQHARHVRRHPSRALAVDVRSYQPVSCWDSGDG 556
D V + + R PS LAV++R + V WD G G
Sbjct: 2298 DAVILVSKTKGRRTQPSEHLAVEIRDKRVVVHWDIGSG 2335
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 443 DHVRNIQHARHVRRHPSRALAVDVRSYQPVSCWDSGDG 556
D V + + R PS LAV++R + V WD G G
Sbjct: 2298 DAVILVSKTKGRRTQPSEHLAVEIRDKRVVVHWDIGSG 2335
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 132 KAGFAGDDAPRAVFPSIVGRPRHQG 206
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,566,978
Number of Sequences: 27780
Number of extensions: 497962
Number of successful extensions: 1688
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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