Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30587
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...   139   1e-34
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.8  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    24   5.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   6.6  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    24   6.6  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   8.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.7  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score =  139 bits (336), Expect = 1e-34
 Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = +3

Query: 261 SQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV-DYVVESMEASFRYPMDY 437
           S D DT +LFT+P+ + G    ++ AGYPVEF VGF NKG   D+VVES+EASFRY MD+
Sbjct: 64  SPDADTYLLFTRPLHASGS-QLELPAGYPVEFLVGFTNKGQFEDFVVESVEASFRYAMDF 122

Query: 438 TYYIQNFTALPYNREVKPKQEATLPIPFIPNEAFAGRPFGLNV 566
           +Y+IQNF+A+PYNREVKP  EAT+   F+P E+FAGRPFGLN+
Sbjct: 123 SYFIQNFSAVPYNREVKPGHEATVAYSFLPTESFAGRPFGLNI 165



 Score = 31.1 bits (67), Expect = 0.043
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 568 SFNYRDASGNAYQEAVYNQT 627
           + NYRD  GN + EAV+N+T
Sbjct: 166 ALNYRDGRGNQFSEAVFNET 185


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 465 LPYNREVKPKQEATLPIPFIPNEAFAG 545
           L Y+R   PK      +P +P+ A AG
Sbjct: 912 LHYHRSASPKATVAGGLPLLPSNALAG 938


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 438 CSPLDSGKMPPWILLHS 388
           C P D  K PP +L HS
Sbjct: 21  CPPQDDPKQPPVLLAHS 37


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 13/52 (25%), Positives = 19/52 (36%)
 Frame = -1

Query: 797 PTVLAQIECGRSLPGPWRTKSPNYFPTQATQGEEPYKKEMVSPILDLPDNFP 642
           P ++ Q    +  P  W   SP Y+         P    + SP+  LP   P
Sbjct: 494 PAIVEQHHQQQQYPIIWSNSSPAYYEPPHAYELNPPAYLLASPVTGLPGVAP 545


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 755 GPWRTKSPNYFPTQATQGEEPYKK 684
           G    KS +YFP   T  +EP K+
Sbjct: 812 GAIEIKSHSYFPPNGTDPDEPEKQ 835


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +3

Query: 426 PMDYTYYIQNFTALPYNREVKPKQEATLPIPFIPNEAFAGRPF 554
           P+    Y+ NF       E+ P Q  TL   FI    F   PF
Sbjct: 291 PLSSNDYVDNFNIFTEFGELTPAQVLTLFNEFINWSEFHQSPF 333


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -3

Query: 246  LIIIYESIVTDYLVVFSFNVDNIIK 172
            +I I ES +T+ +  FS+N D++++
Sbjct: 2094 VISIRESTMTEPMFEFSYNADSMVE 2118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 905,310
Number of Sequences: 2352
Number of extensions: 19164
Number of successful extensions: 44
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)