Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30587
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p pro...   132   7e-31
AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-P...   132   7e-31

>AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p
           protein.
          Length = 302

 Score =  132 bits (318), Expect = 7e-31
 Identities = 58/103 (56%), Positives = 80/103 (77%)
 Frame = +3

Query: 258 SSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEASFRYPMDY 437
           SS + DT +LFTKP+ + G    D+  G PVEF +GF NKG+ ++V+E++EASFRYPMD+
Sbjct: 64  SSPNADTYLLFTKPLYTPGQ-QLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDF 122

Query: 438 TYYIQNFTALPYNREVKPKQEATLPIPFIPNEAFAGRPFGLNV 566
            Y+IQNF+A+ YNREVKP  E+T+   F+P++ FAGRPFGLN+
Sbjct: 123 NYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNI 165


>AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-PA
           protein.
          Length = 302

 Score =  132 bits (318), Expect = 7e-31
 Identities = 58/103 (56%), Positives = 80/103 (77%)
 Frame = +3

Query: 258 SSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEASFRYPMDY 437
           SS + DT +LFTKP+ + G    D+  G PVEF +GF NKG+ ++V+E++EASFRYPMD+
Sbjct: 64  SSPNADTYLLFTKPLYTPGQ-QLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDF 122

Query: 438 TYYIQNFTALPYNREVKPKQEATLPIPFIPNEAFAGRPFGLNV 566
            Y+IQNF+A+ YNREVKP  E+T+   F+P++ FAGRPFGLN+
Sbjct: 123 NYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNI 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,165,799
Number of Sequences: 53049
Number of extensions: 827384
Number of successful extensions: 2196
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)