Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30586
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    29   0.033
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    27   0.24 
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    27   0.24 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.9  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 0.033
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 2   FNGKELNKSINPDE 43
           F+GKELN+ INPDE
Sbjct: 181 FDGKELNRGINPDE 194


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 2   FNGKELNKSINPDE 43
           FNGKE  +SINPDE
Sbjct: 182 FNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 2   FNGKELNKSINPDE 43
           FNGKE  +SINPDE
Sbjct: 182 FNGKEPCRSINPDE 195


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +1

Query: 388 NGILNVSAIEKSINKENKITITNDKGRLSKEEIERMVNEAGSTETRMTSKRRPSRP 555
           + +L     +++ +   +++    K    KE I R + E+G    +   KR+ S P
Sbjct: 545 SAVLTCKVCDQAFSSLKELSNHMVKNSHYKEHIMRSITESGGRRRQTREKRKKSLP 600


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 316 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 423
           +   G+  A   V  I+   D+D NG  N + ++K+
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKT 91


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 759 NALSQILSGLVLITPPLS 706
           N L  + SGL+ + PPL+
Sbjct: 353 NPLDAVTSGLLPVRPPLT 370


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 253 RLIQVFEVERAMTKDNNLLGKF 318
           RLI  FE+ ++  +D N LG F
Sbjct: 258 RLI-TFEMNKSFERDKNKLGDF 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,096
Number of Sequences: 336
Number of extensions: 4237
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)