Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30586
(817 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 146 3e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 145 8e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 130 2e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 99 4e-22
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 87 3e-18
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 32 0.085
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.34
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 29 0.79
SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 28 1.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 28 1.8
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 4.2
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 4.2
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 26 7.4
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 7.4
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 25 9.7
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 9.7
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 9.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 146 bits (354), Expect = 3e-36
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +1
Query: 256 LIQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKE 435
LIQVFE ERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK K
Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKT 496
Query: 436 NKITITNDKGRLSKEEIERMVNEA 507
KITITNDKGRLSKEEI+RMV+EA
Sbjct: 497 QKITITNDKGRLSKEEIDRMVSEA 520
Score = 73.3 bits (172), Expect = 4e-14
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
FNGKE KSINPDE IL GD SE+ QD GIETAGGVMT L
Sbjct: 352 FNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPL 411
Query: 182 IKRNXXXXXXXXXXXXXYSDNQPG 253
IKRN Y+DNQPG
Sbjct: 412 IKRNTTIPTKKSEVFSTYADNQPG 435
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKGK 623
KY+ ED+ + IQAKN LESY +S++++++D LK K
Sbjct: 522 KYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDK 559
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 145 bits (351), Expect = 8e-36
Identities = 71/84 (84%), Positives = 75/84 (89%)
Frame = +1
Query: 256 LIQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKE 435
LIQVFE ERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK K
Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKT 496
Query: 436 NKITITNDKGRLSKEEIERMVNEA 507
KITITNDKGRLSKEEI+RMV EA
Sbjct: 497 QKITITNDKGRLSKEEIDRMVAEA 520
Score = 74.5 bits (175), Expect = 2e-14
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
FNGKE KSINPDE +L GD SE+ QD GIETAGGVMT L
Sbjct: 352 FNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPL 411
Query: 182 IKRNXXXXXXXXXXXXXYSDNQPG 253
IKRN YSDNQPG
Sbjct: 412 IKRNTTIPTKKSEIFSTYSDNQPG 435
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKGK 623
KY+ ED+ + IQAKN LESY +S++++++D LK K
Sbjct: 522 KYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDK 559
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 130 bits (314), Expect = 2e-31
Identities = 62/85 (72%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LIQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-INK 432
LIQV+E ER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K
Sbjct: 466 LIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGK 525
Query: 433 ENKITITNDKGRLSKEEIERMVNEA 507
K+ I NDKGRLS+E+IERMV EA
Sbjct: 526 PEKLVIKNDKGRLSEEDIERMVKEA 550
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
F GK+ +K INPDE +L G++ + + GIET GGVMT L
Sbjct: 383 FFGKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKL 440
Query: 182 IKRN 193
I RN
Sbjct: 441 IGRN 444
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKGK 623
++ ED KE I+A+N LE+Y +S+K +DE+L GK
Sbjct: 552 EFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGK 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 99 bits (238), Expect = 4e-22
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +1
Query: 259 IQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKEN 438
I+VF+ ER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+ NK++
Sbjct: 481 IRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDS 540
Query: 439 KITITNDKGRLSKEEIERMVNEA 507
IT+ G L+ EIE MV +A
Sbjct: 541 SITVAGSSG-LTDSEIEAMVADA 562
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +2
Query: 11 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 190
+E KS+NPDE +L G V+D GIET GGV T LI R
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457
Query: 191 N 193
N
Sbjct: 458 N 458
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 617
KYR D +KE I+ N ES C ++S ++ K K
Sbjct: 564 KYRASDMARKEAIENGNRAESVCTDIESNLDIHKDK 599
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 87.0 bits (206), Expect = 3e-18
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +1
Query: 265 VFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKENKI 444
V++ ER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+ + I
Sbjct: 445 VYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHI 504
Query: 445 TITNDKGRLSKEEIERMVNEA 507
ITN G LS +I+ M+ A
Sbjct: 505 EITNSVGHLSSTKIQEMIENA 525
Score = 35.1 bits (77), Expect = 0.012
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 178
F+G+ LNKSINPDE +L + S++ QD G+ G V
Sbjct: 356 FDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGV 415
Query: 179 LIKRNXXXXXXXXXXXXXYSDNQ 247
+ RN +DNQ
Sbjct: 416 VCPRNTPIPTIKKRTFTTVADNQ 438
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 32.3 bits (70), Expect = 0.085
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +1
Query: 367 VTFDIDANGILNVSA---IEKSINKENKITITNDKGR---LSKEEIERMVNEAGSTETRM 528
VT + D + LN + +E K+N I N + LSKEE R + + R+
Sbjct: 49 VTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRL 108
Query: 529 TSKRRPSRPRMHWNLTASA*SLPWRMRSS 615
T RRP HW+ T +A L R S
Sbjct: 109 TIPRRP-----HWDQTTTAVELDRMERES 132
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 30.3 bits (65), Expect = 0.34
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 382 DANGILNVSAIEKSINKENKITITNDKGRLSKEEIERMVNEAGSTETRMTSKRR 543
D LNVS + S +E +T ++ R+ +EE +RM ++ T ++R
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKR 111
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 29.1 bits (62), Expect = 0.79
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +1
Query: 406 SAIEKSINKEN---KITITNDKGRLSKEEIERMVNEAGSTETRMTSKRRPSRPRMHWNLT 576
SA+EK K K+TIT+D ++S + G + T + SK S + N
Sbjct: 41 SALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKV 100
Query: 577 ASA*SL--PWRMRSSR 618
+SA L P R RSS+
Sbjct: 101 SSALKLTIPKRWRSSK 116
>SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 487 ERMVNEAGSTETRMTSKRRPSR 552
+R+ NE S E TSK+RPSR
Sbjct: 200 KRLKNEKSSAEISQTSKQRPSR 221
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 390 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAYG**GRKYRNEDDKQKE 542
R P R +YRE H + + H R QGR +Y R +R++ ++E
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYK--KRSHRSDRYTERE 369
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 407 ETLRIPLASMSKVTSI*GTPRGAGGIP 327
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 540 ETIQAKNALESYCFSMKSTMED 605
ET+ KNALE Y + ++ ++D
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD 596
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 7.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = -1
Query: 817 GNSLRAPLGNNLRK---LSGFVKCPFPNS----FRLGAHNSSFVGQAGWNPSHLDGGRAL 659
GN LR+ + ++ LSG +C F + F+L S NPS ++GG +
Sbjct: 196 GNVLRSDVSGVVKMRAMLSGMPECQFGLNDKLDFKLKQSESKSKSNNSRNPSSVNGGFVI 255
Query: 658 VED 650
+ED
Sbjct: 256 LED 258
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 516 RNEDDKQKETIQAKNALESYCFSMKST 596
RN+ +KQ TI KNA++ Y S+K T
Sbjct: 255 RNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 25.4 bits (53), Expect = 9.7
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = +1
Query: 349 GVPQIEVTFDIDANGILNVSAIEKSINKEN---KITITNDKGRLSKEEIERMVN--EAGS 513
G+ +I FD D N I V I +N++ +T+ + + ++ AG
Sbjct: 561 GILKIANKFDDDENSIDVVRDIYVPLNQKGMNPNLTVRDPPAGVLIFRLQESFTYPNAGH 620
Query: 514 TETRMTSKRRPSRPRMHWNLTASA*SLPWRMRSSREK 624
+ +TSK + R + N+ A PW + R+K
Sbjct: 621 VNSMLTSKAKTVTRRGNANIYKKASDRPWNDPAPRKK 657
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 427 NKENKITITNDKGRLSKEEIERMVNE 504
NK+ K T D SKEE+E +V E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVRE 554
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 422 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARST 273
+ S L IP+AS K S T G G S + P L++ + R++
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERNS 528
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,337,268
Number of Sequences: 5004
Number of extensions: 67091
Number of successful extensions: 235
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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