Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30586
(817 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 156 2e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 4e-37
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 126 3e-29
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 1e-23
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 38 0.013
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.64
SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 1.8
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 2.6
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 29 3.4
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 29 3.4
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 29 4.5
SB_3524| Best HMM Match : ETS_PEA3_N (HMM E-Value=5.8) 29 6.0
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 156 bits (378), Expect = 2e-38
Identities = 81/124 (65%), Positives = 97/124 (78%)
Frame = +1
Query: 256 LIQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKE 435
LIQVFE ER+MT NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA++KS KE
Sbjct: 441 LIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKE 500
Query: 436 NKITITNDKGRLSKEEIERMVNEAGSTETRMTSKRRPSRPRMHWNLTASA*SLPWRMRSS 615
NKITITNDKGRLSKE+IERMVNEA ++ + +++ R + +L + A S+ +
Sbjct: 501 NKITITNDKGRLSKEDIERMVNEA--SKYKEEDEKQRDRIQTKNSLESYAYSMKSTVEDD 558
Query: 616 REKD 627
+ KD
Sbjct: 559 KVKD 562
Score = 80.6 bits (190), Expect = 1e-15
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
F GKELNKSINPDE ILHGDK + V+D GIETAGGVM+ L
Sbjct: 356 FGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVL 415
Query: 182 IKRNXXXXXXXXXXXXXYSDNQPG 253
IKRN YSDNQPG
Sbjct: 416 IKRNSTIPTKQTQTFTTYSDNQPG 439
Score = 58.8 bits (136), Expect = 5e-09
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKGK 623
KY+ ED+KQ++ IQ KN+LESY +SMKST+ED+K+K K
Sbjct: 526 KYKEEDEKQRDRIQTKNSLESYAYSMKSTVEDDKVKDK 563
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 623 KISDSDKQTILDKCTTTIQ 679
KIS+ DK+ ILDKCT ++
Sbjct: 563 KISEEDKKAILDKCTEVLK 581
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 152 bits (368), Expect = 4e-37
Identities = 71/87 (81%), Positives = 81/87 (93%)
Frame = +1
Query: 247 TRRLIQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSI 426
T LIQV+E ER++TKDNNLLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KS
Sbjct: 530 TSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKST 589
Query: 427 NKENKITITNDKGRLSKEEIERMVNEA 507
KENKITITNDKGRLSKE+IERMV EA
Sbjct: 590 GKENKITITNDKGRLSKEDIERMVKEA 616
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/82 (51%), Positives = 43/82 (52%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
FNGKELNKSINPDE ILHGDKSE QD G+ETAGGVMT
Sbjct: 448 FNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAA 507
Query: 182 IKRNXXXXXXXXXXXXXYSDNQ 247
IKRN YSDNQ
Sbjct: 508 IKRNTTIPTKQTQTFTTYSDNQ 529
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKGK 623
K++ D+ +E IQ+KN+LESY FSMKSTMEDEK+K K
Sbjct: 618 KFKAADEAVRERIQSKNSLESYAFSMKSTMEDEKVKDK 655
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 139 bits (337), Expect = 2e-33
Identities = 67/94 (71%), Positives = 79/94 (84%)
Frame = +1
Query: 259 IQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKEN 438
I+VFE ER +TK NNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +KS K
Sbjct: 441 IRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTG 500
Query: 439 KITITNDKGRLSKEEIERMVNEAGSTETRMTSKR 540
ITITNDKGRLSKEEI+RM+N+A ++ ++R
Sbjct: 501 SITITNDKGRLSKEEIDRMINDAEKYKSEDEAQR 534
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/83 (48%), Positives = 44/83 (53%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
F+GK LNKSINPDE IL GDKS+EV+D GIETAG VMT L
Sbjct: 355 FSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKL 414
Query: 182 IKRNXXXXXXXXXXXXXYSDNQP 250
I+RN YSDNQP
Sbjct: 415 IERNARIPTKATQTFTTYSDNQP 437
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKGK 623
KY++ED+ Q+E I A+N LESY F +KS + + L+GK
Sbjct: 525 KYKSEDEAQREKIAARNRLESYAFGVKSAISEPSLEGK 562
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 126 bits (303), Expect = 3e-29
Identities = 60/83 (72%), Positives = 69/83 (83%)
Frame = +1
Query: 259 IQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKEN 438
IQVFE ER MTKDN+ LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA +K +
Sbjct: 1135 IQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKE 1194
Query: 439 KITITNDKGRLSKEEIERMVNEA 507
KITITND+ RL+ E+IERMVN+A
Sbjct: 1195 KITITNDQNRLTPEDIERMVNDA 1217
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/82 (34%), Positives = 35/82 (42%)
Frame = +2
Query: 2 FNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTL 181
F GKE ++ INPDE +L G+ E+ + GIET GGVMT L
Sbjct: 1051 FEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKL 1108
Query: 182 IKRNXXXXXXXXXXXXXYSDNQ 247
I RN +DNQ
Sbjct: 1109 ISRNTVIPTKKSQVFSTAADNQ 1130
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 KYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKGK 623
K+ +ED K KE ++A+N LESY +S+K+ + D EKL GK
Sbjct: 1219 KFADEDKKTKEKVEARNELESYAYSLKNQVGDKEKLGGK 1257
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 107 bits (256), Expect = 1e-23
Identities = 52/83 (62%), Positives = 63/83 (75%)
Frame = +1
Query: 259 IQVFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKEN 438
I+VF+ ER M DN LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K +E
Sbjct: 246 IKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQ 305
Query: 439 KITITNDKGRLSKEEIERMVNEA 507
+I I G LSK+ IE M+ EA
Sbjct: 306 QIVI-QSSGGLSKDAIENMIKEA 327
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +2
Query: 8 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 187
G+ +K++NPDE +L GD V+D GIET GGV T LI
Sbjct: 166 GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLIT 221
Query: 188 RN 193
RN
Sbjct: 222 RN 223
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +2
Query: 8 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 187
G+ +K++NPDE +L GD V+D GIET GGV T LI
Sbjct: 111 GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLIT 166
Query: 188 RN 193
RN
Sbjct: 167 RN 168
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 259 IQVFEVERAMTKDNNLLGKFEL 324
I+VF+ ER M DN LLG+F+L
Sbjct: 191 IKVFQGEREMAIDNKLLGQFQL 212
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 35.1 bits (77), Expect = 0.069
Identities = 18/80 (22%), Positives = 41/80 (51%)
Frame = +1
Query: 265 VFEVERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSINKENKI 444
+FE ++ + + + G EL PPA V ++E +F+ +G+++ + S +E K
Sbjct: 125 IFEPRESVPRQSQVPGAMELLPPPPAVFNVNEVETSFEELKSGLMSSGNSDMSSLEELKE 184
Query: 445 TITNDKGRLSKEEIERMVNE 504
+T ++ + + +VN+
Sbjct: 185 CVTKKPSTVTDKHVTYIVNK 204
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/69 (18%), Positives = 36/69 (52%)
Frame = +3
Query: 369 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GRKYRNEDDKQKETI 548
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q + + ++ + + +Q++ +
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQL 347
Query: 549 QAKNALESY 575
Q + + +
Sbjct: 348 QQQQQQQQH 356
>SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 26.2 bits (55), Expect(2) = 1.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 664 HDHHPSGWDSNQLGRQRRSYEHQAG 738
HD H S S GR R Y H+ G
Sbjct: 504 HDSHASHGGSVSSGRHREEYHHKRG 528
Score = 22.6 bits (46), Expect(2) = 1.8
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 649 HPRQVHDHH 675
HP +HDHH
Sbjct: 474 HPDNIHDHH 482
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -1
Query: 202 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 68
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +3
Query: 369 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GRKYRNEDDKQKE 542
+++H + +R+ RE ++GE+D +R+R + RDR G + R E D++++
Sbjct: 110 NVKHSGRVDSERYEDREDRERGERDRDRRRERDRGE-RDRGERDRGERDRGERDRRRD 166
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 381 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GRKY---RNEDDK 533
R QRY + + RE HQ+G HH R S + RD G++Y R++ DK
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRDNE----GKRYSDLRHDGDK 182
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 148 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIK 2
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAK 57
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 463 GRLSKEEIERMVNEAGSTETRMTSKRRPSRPR 558
GR KEE E + TE + T KR+ RPR
Sbjct: 681 GRKKKEESEYDDEDGSDTENKETGKRKRGRPR 712
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 463 GRLSKEEIERMVNEAGSTETRMTSKRRPSRPR 558
GR KEE E + TE + T KR+ RPR
Sbjct: 786 GRKKKEESEYDDEDGSDTENKETGKRKRGRPR 817
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 674 WWSCTCRGWSACQSQRSFSLELLILHGR 591
WW TC S CQ + S+ L GR
Sbjct: 155 WWDNTCTSHSKCQGSTTHSIRPCTLQGR 182
>SB_3524| Best HMM Match : ETS_PEA3_N (HMM E-Value=5.8)
Length = 357
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 375 RHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GRKYRNEDDKQKETIQA 554
RH + + +R V EQD+ +R S R YG GRK ED + + A
Sbjct: 286 RHEGPTHIRTSVHRNVGDAAEQDYKDHHRRRSHNRPRRRYGWVGRKVLREDFTKDPSANA 345
Query: 555 KN 560
N
Sbjct: 346 MN 347
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 387 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 488
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 344 GAGGIPVSSNLPSKLLSLVIARSTSNTWM 258
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,043,672
Number of Sequences: 59808
Number of extensions: 564159
Number of successful extensions: 1739
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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