Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30585
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.91 
EF519440-2|ABP73490.1|  165|Anopheles gambiae CTL4 protein.            25   2.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   6.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.5  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    23   8.5  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   8.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.5  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.91
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 5   NSFDELVPNAIAAPDAAIHELTFVDNEIETIHPNSLGFIGQAEAHSANSIKYKNN 169
           NS + L P  I +    +  L   +NE+ +   N   F G  +AH A S K +NN
Sbjct: 292 NSLNVLAPG-IFSDLKQLLVLDLSNNELTSEWINPATFPGVVQAHPARSFKQQNN 345



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 3   KTHSTNWYLMRLPLRMQLYTN*LLWTTKLKR 95
           +TH+T+W  + L +  Q++TN L   +KL+R
Sbjct: 129 RTHNTDWSSISLDIAPQVFTNEL---SKLQR 156


>EF519440-2|ABP73490.1|  165|Anopheles gambiae CTL4 protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1

Query: 553 DDVVIVSTSNHFYRQTQVAVRFAQGFCLC 639
           D +V +  S H YR T       Q  C+C
Sbjct: 1   DTLVCLIVSTHGYRATTAREMITQNLCVC 29


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 382 TKSEGELVEIKNPRFPHKNTQEESGISERDKKI 480
           T ++GE     N R+ H  TQ+   IS+ + K+
Sbjct: 323 TPNDGECHLDHNGRYTHSTTQDYPSISQINLKV 355


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 279  EFIDSTVTPNSYGSIDT 229
            E +DS V PNS   IDT
Sbjct: 1988 ELVDSGVAPNSTNFIDT 2004


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 315 HVLFRFVKATREEFIDSTVTPNSYGSIDTTLRDRFST*LMLQWH 184
           HVL   V   RE+F++S       G + T +RD     +  +WH
Sbjct: 382 HVLLSLVHDPREDFLESF---GVMGDVTTAMRDP----VFYRWH 418


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 221 LNVVSIEPYEFGVTVLSMNSSRVALTNLNRTCYSK 325
           L  + ++ Y  G+      +SR+ALTNL   C  K
Sbjct: 255 LTGIGVDGYTSGIIA---EASRIALTNLGVCCEDK 286


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 364 EPLVFQCIRHREI 326
           E  +F C+RHRE+
Sbjct: 924 EHTIFHCVRHREL 936


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,473
Number of Sequences: 2352
Number of extensions: 16156
Number of successful extensions: 62
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)