Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30585
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    28   0.089
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   1.1  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   2.5  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   2.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   2.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   5.9  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   5.9  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   5.9  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 28.3 bits (60), Expect = 0.089
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 779 NSLEWNSLVEVRRFHSIRMVLSRSNSVYWIN*ENRTRINQSPRHFPLQRQN 627
           N++E+  + ++    S   V+S+ N V +    N + I     H PLQRQN
Sbjct: 292 NNIEYEGIQDIFNTQSSAKVMSK-NGVLFFGLVNNSAIGCWNEHQPLQRQN 341


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 364 QCETFKTKSEGELVEIKNPRFP 429
           +C+ ++  + GE+  I NPR+P
Sbjct: 41  ECDYYQNLNLGEIYYIYNPRYP 62


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 642 WEVAGALINARSIFSIYPVNGITSGKDHSD*MEPSYFHQ 758
           W+  G +  +    S Y + GI  G+ H D    ++FH+
Sbjct: 76  WQQTGVMNGSE--LSTYNIAGIIEGQYHDDEDLKTFFHK 112


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 558 RGNCVNIKSFLSTNSSCGAFCSRILP 635
           RG C + + F   +  C  FC  ++P
Sbjct: 34  RGKCPSNEIFSRCDGRCQRFCPNVVP 59


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 558 RGNCVNIKSFLSTNSSCGAFCSRILP 635
           RG C + + F   +  C  FC  ++P
Sbjct: 34  RGKCPSNEIFSRCDGRCQRFCPNVVP 59


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +1

Query: 349 EKPTVQCETFKTKSEGELVEIKNPRFPHKNTQEESGI 459
           E+P +  +  K  +E E     +P+  +KN Q ++ +
Sbjct: 2   EQPNICKQILKRSAESEFEGASSPKKRNKNPQPKNAV 38


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +2

Query: 143 ANSIKYKNNYYGERCHCNISQVLKRSLNVVSIEPYEFGVTVLSMN 277
           +N+  Y NNY     + N +    +  N+++IE     V +   N
Sbjct: 89  SNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 133


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 47  DAAIHELTFVDNEIETIHPN 106
           D A+ ++ F+D+E+E I  N
Sbjct: 117 DCALEKMKFLDDELEKIAGN 136


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 47  DAAIHELTFVDNEIETIHPN 106
           D A+ ++ F+D+E+E I  N
Sbjct: 117 DCALEKMKFLDDELEKIAGN 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,799
Number of Sequences: 438
Number of extensions: 4815
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)