Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30584
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.2  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   6.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.7  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   8.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.7  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   8.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 223 RGPHGVQVVDTAPTIRSPWTRRPSSLCS*KKISETE-PWSLYQLPEPSGKESP 378
           RG   V  VDT     + W   P        +   E PWSLY    P G+ +P
Sbjct: 319 RGIRVVLEVDTPAHAGNGWNWGPQEGLGELAVCVNERPWSLYCGEPPCGQLNP 371


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 256 PCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFSRSLM 146
           P ++    A      P+SL   RTS+  P   SRS+M
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVM 102


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 52  LGSFYNCCVDRGPGLPGTE 108
           L +++NC +DRG   P  +
Sbjct: 38  LKNYFNCIMDRGACTPDAD 56


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = -2

Query: 217 PAPASLSLSRTSSRIPRSFSRSLMPNEPVKAR 122
           PAP  +S+    +R+ +   +  + N P+  +
Sbjct: 487 PAPVKISVQEVLNRVRKPTKKLHLKNSPISKK 518


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 505 SLSEPPRQLKPW 470
           S+SEPP    PW
Sbjct: 160 SVSEPPANFYPW 171


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 505 SLSEPPRQLKPW 470
           S+SEPP    PW
Sbjct: 160 SVSEPPANFYPW 171


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 159 ENDRGIREDVRLSDREAGAGTAWAARCPGRRH 254
           ++D  +    R +  EAG G  W A   G  H
Sbjct: 15  DDDDFVVVKTRSNSPEAGGGGFWLAAASGAPH 46


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 505 SLSEPPRQLKPW 470
           S+SEPP    PW
Sbjct: 160 SVSEPPANFYPW 171


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 22  YPRVAFVTLKLGSFYNCC 75
           YP V F++ KLG  +  C
Sbjct: 76  YPSVHFISRKLGEDFVTC 93


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 159 ENDRGIREDVRLSDREAGAGTAWAARCPGRRH 254
           ++D  +    R +  EAG G  W A   G  H
Sbjct: 15  DDDDFVVVKTRSNSPEAGGGGFWLAAASGAPH 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,913
Number of Sequences: 336
Number of extensions: 4088
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)