Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30584
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens ... 152 1e-36
AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein. 152 1e-36
AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein. 152 1e-36
AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein. 152 1e-36
BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein p... 150 5e-36
AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens ... 149 1e-35
AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-bind... 142 2e-33
AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein. 140 7e-33
BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A (... 137 5e-32
AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens ... 137 5e-32
CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein. 85 4e-16
AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein. 85 4e-16
AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein. 85 4e-16
BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein. 56 2e-07
AK128214-1|BAC87330.1| 1508|Homo sapiens protein ( Homo sapiens ... 33 1.2
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318... 33 1.6
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318... 33 1.6
Y08262-1|CAA69589.1| 914|Homo sapiens SCA2 protein. 32 2.8
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 32 2.8
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 32 2.8
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein. 32 2.8
BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific ... 31 4.9
BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific ... 31 4.9
BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific ... 31 4.9
AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens ... 31 4.9
BC036038-1|AAH36038.1| 420|Homo sapiens ZNF25 protein protein. 31 6.5
AL834125-1|CAD38845.1| 362|Homo sapiens hypothetical protein pr... 31 6.5
AL117337-3|CAH73314.1| 456|Homo sapiens zinc finger protein 25 ... 31 6.5
AL117337-2|CAH73313.1| 420|Homo sapiens zinc finger protein 25 ... 31 6.5
AK056452-1|BAB71187.1| 456|Homo sapiens protein ( Homo sapiens ... 31 6.5
AJ491696-1|CAD36955.1| 456|Homo sapiens zinc finger protein 25 ... 31 6.5
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 30 8.6
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 30 8.6
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 30 8.6
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 30 8.6
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 30 8.6
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 30 8.6
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 30 8.6
>AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23293 fis, clone HEP10514. ).
Length = 579
Score = 152 bits (369), Expect = 1e-36
Identities = 83/163 (50%), Positives = 98/163 (60%)
Frame = +3
Query: 252 HGPDHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCC 431
H DH F LDEEAL+ +LL+E IRD +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 67 HEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK----- 121
Query: 432 GGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSE 611
W+G +PL GF+WRGG ER+T +DTQGAFDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 612 STVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
ST++DCATVFAL Y S + QEDDL LQLFTE
Sbjct: 182 STIKDCATVFALSTMTSSVQVYNLS-QNIQEDDL-QHLQLFTE 222
>AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein.
Length = 579
Score = 152 bits (369), Expect = 1e-36
Identities = 83/163 (50%), Positives = 98/163 (60%)
Frame = +3
Query: 252 HGPDHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCC 431
H DH F LDEEAL+ +LL+E IRD +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 67 HEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK----- 121
Query: 432 GGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSE 611
W+G +PL GF+WRGG ER+T +DTQGAFDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 612 STVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
ST++DCATVFAL Y S + QEDDL LQLFTE
Sbjct: 182 STIKDCATVFALSTMTSSVQVYNLS-QNIQEDDL-QHLQLFTE 222
>AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein.
Length = 583
Score = 152 bits (369), Expect = 1e-36
Identities = 83/163 (50%), Positives = 98/163 (60%)
Frame = +3
Query: 252 HGPDHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCC 431
H DH F LDEEAL+ +LL+E IRD +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 67 HEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK----- 121
Query: 432 GGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSE 611
W+G +PL GF+WRGG ER+T +DTQGAFDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 612 STVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
ST++DCATVFAL Y S + QEDDL LQLFTE
Sbjct: 182 STIKDCATVFALSTMTSSVQVYNLS-QNIQEDDL-QHLQLFTE 222
>AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein.
Length = 579
Score = 152 bits (369), Expect = 1e-36
Identities = 83/163 (50%), Positives = 98/163 (60%)
Frame = +3
Query: 252 HGPDHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCC 431
H DH F LDEEAL+ +LL+E IRD +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 67 HEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK----- 121
Query: 432 GGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSE 611
W+G +PL GF+WRGG ER+T +DTQGAFDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 612 STVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
ST++DCATVFAL Y S + QEDDL LQLFTE
Sbjct: 182 STIKDCATVFALSTMTSSVQVYNLS-QNIQEDDL-QHLQLFTE 222
>BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein
protein.
Length = 541
Score = 150 bits (364), Expect = 5e-36
Identities = 82/159 (51%), Positives = 101/159 (63%)
Frame = +3
Query: 264 HTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCCGGSE 443
H+F LDE+AL S+LL++ IRD VVV+SVAGAFRKGKSF+LDF LRY++ + + G S
Sbjct: 37 HSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKES--GHSN 94
Query: 444 WLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSESTVR 623
WLG E+PL GFSWRGGS+ +T +DTQGAFDS+STV+
Sbjct: 95 WLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVK 154
Query: 624 DCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
DCAT+FAL Y S + QEDDL LQLFTE
Sbjct: 155 DCATIFALSTMTSSVQIYNLS-QNIQEDDL-QQLQLFTE 191
>AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
).
Length = 541
Score = 149 bits (361), Expect = 1e-35
Identities = 82/159 (51%), Positives = 100/159 (62%)
Frame = +3
Query: 264 HTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCCGGSE 443
H+F LDE+AL S LL++ IRD VVV+SVAGAFRKGKSF+LDF LRY++ + + G S
Sbjct: 37 HSFELDEKALASTLLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKES--GHSN 94
Query: 444 WLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSESTVR 623
WLG E+PL GFSWRGGS+ +T +DTQGAFDS+STV+
Sbjct: 95 WLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVK 154
Query: 624 DCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
DCAT+FAL Y S + QEDDL LQLFTE
Sbjct: 155 DCATIFALSTMTSSVQIYNLS-QNIQEDDL-QQLQLFTE 191
>AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-binding
protein protein.
Length = 558
Score = 142 bits (343), Expect = 2e-33
Identities = 79/160 (49%), Positives = 95/160 (59%)
Frame = +3
Query: 261 DHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCCGGS 440
DH+F LDE AL +LL E +RD+ VV +SVAGAFRKGKSFL+DF LRYM+ +
Sbjct: 43 DHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESV----- 97
Query: 441 EWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSESTV 620
+W+G +PL GFSWRGGSER+T +DTQG FDS+ST+
Sbjct: 98 DWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTL 157
Query: 621 RDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
RD ATVFAL Y S+ QEDDL LQLFTE
Sbjct: 158 RDSATVFALSTMISSIQVYNLSQNV-QEDDL-QHLQLFTE 195
>AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein.
Length = 558
Score = 140 bits (338), Expect = 7e-33
Identities = 78/160 (48%), Positives = 94/160 (58%)
Frame = +3
Query: 261 DHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCCGGS 440
DH+F LDE AL +LL E +RD+ VV +SVAGAFRKGKSFL+DF LRYM+ +
Sbjct: 43 DHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESV----- 97
Query: 441 EWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSESTV 620
+W+G +PL GFSWRGGSER+ +DTQG FDS+ST+
Sbjct: 98 DWVGDYNEPLTGFSWRGGSEREATGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTL 157
Query: 621 RDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
RD ATVFAL Y S+ QEDDL LQLFTE
Sbjct: 158 RDSATVFALSTMISSIQVYNLSQNV-QEDDL-QHLQLFTE 195
>BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A
(autosomal dominant) protein.
Length = 558
Score = 137 bits (331), Expect = 5e-32
Identities = 77/160 (48%), Positives = 94/160 (58%)
Frame = +3
Query: 261 DHTFTLDEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCCGGS 440
+H+F LDE AL +LL E +RD+ VV +SVAGAFRKGKSFL+DF LRYM+ +
Sbjct: 43 EHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESV----- 97
Query: 441 EWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSESTV 620
+W+G +PL GFSWRGGSER+T +DTQG FDS+ST+
Sbjct: 98 DWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTL 157
Query: 621 RDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
RD ATVFAL Y S+ QEDDL LQL TE
Sbjct: 158 RDSATVFALSTMISSIQVYNLSQNV-QEDDL-QHLQLCTE 195
>AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ40269 fis, clone TESTI2026597. ).
Length = 567
Score = 137 bits (331), Expect = 5e-32
Identities = 76/154 (49%), Positives = 95/154 (61%)
Frame = +3
Query: 279 DEEALKSLLLKEDIRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYGTCCGGSEWLGSE 458
D+ S+LL++ IRD VVV+SVAGAFRKGKSF+LDF LRY++ + + G S WLG
Sbjct: 68 DDAMESSILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKES--GHSNWLGDP 125
Query: 459 EDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXXXXXXXCLDTQGAFDSESTVRDCATV 638
E+PL GFSWRGGS+ +T +DTQGAFDS+STV+DCAT+
Sbjct: 126 EEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKDCATI 185
Query: 639 FALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
FAL Y+ S + QEDDL LQLFTE
Sbjct: 186 FALSTMTSSVQIYSLS-QNIQEDDL-QQLQLFTE 217
>CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein.
Length = 475
Score = 84.6 bits (200), Expect = 4e-16
Identities = 51/119 (42%), Positives = 62/119 (52%)
Frame = +3
Query: 384 LDFFLRYMHYKYGTCCGGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXX 563
+DF LRYM+ + +W+G +PL GFSWRGGSER+T
Sbjct: 1 MDFMLRYMYNQESV-----DWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGK 55
Query: 564 XXXXXCLDTQGAFDSESTVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
+DTQG FDS+ST+RD ATVFAL Y S+ QEDDL LQLFTE
Sbjct: 56 KVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNV-QEDDL-QHLQLFTE 112
>AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein.
Length = 475
Score = 84.6 bits (200), Expect = 4e-16
Identities = 51/119 (42%), Positives = 62/119 (52%)
Frame = +3
Query: 384 LDFFLRYMHYKYGTCCGGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXX 563
+DF LRYM+ + +W+G +PL GFSWRGGSER+T
Sbjct: 1 MDFMLRYMYNQESV-----DWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGK 55
Query: 564 XXXXXCLDTQGAFDSESTVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
+DTQG FDS+ST+RD ATVFAL Y S+ QEDDL LQLFTE
Sbjct: 56 KVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNV-QEDDL-QHLQLFTE 112
>AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein.
Length = 475
Score = 84.6 bits (200), Expect = 4e-16
Identities = 51/119 (42%), Positives = 62/119 (52%)
Frame = +3
Query: 384 LDFFLRYMHYKYGTCCGGSEWLGSEEDPLQGFSWRGGSERDTPAYSCGLXXXXXXXXXXX 563
+DF LRYM+ + +W+G +PL GFSWRGGSER+T
Sbjct: 1 MDFMLRYMYNQESV-----DWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGK 55
Query: 564 XXXXXCLDTQGAFDSESTVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
+DTQG FDS+ST+RD ATVFAL Y S+ QEDDL LQLFTE
Sbjct: 56 KVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNV-QEDDL-QHLQLFTE 112
>BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein.
Length = 412
Score = 55.6 bits (128), Expect = 2e-07
Identities = 31/53 (58%), Positives = 36/53 (67%)
Frame = +3
Query: 582 LDTQGAFDSESTVRDCATVFALFQRCCRPFRYTTSRKTFQEDDLPATLQLFTE 740
+DTQGAFDS+ST++DCATVFAL Y S + QEDDL LQLFTE
Sbjct: 1 MDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLS-QNIQEDDL-QHLQLFTE 51
>AK128214-1|BAC87330.1| 1508|Homo sapiens protein ( Homo sapiens cDNA
FLJ46346 fis, clone TESTI4047328, moderately similar to
Mus musculus otogelin (Otog). ).
Length = 1508
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 241 GHRAAHAVPAPASLSLSRTSSRIPRSFSRSLMPNEPVKARG*PCAPFLAAQDHD 80
G +A A+P P S +LSR S+R S ++ + +A G P LAA+ D
Sbjct: 969 GAQAGTALPVPTSYALSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVD 1022
>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 337 TTALSLISSFRSRDLRASSSRVNVWSGPCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFS 158
++A S +SS R +D R SG P R++ P P S S SRT +R PRS S
Sbjct: 4 SSARSSVSSHRPKDDGGGGPRSGRSSGSSSGPARRSSP--PPPPSGSSSRTPARRPRSPS 61
Query: 157 ----RSLMPNEPVKARG*PCAP 104
R P+ P R P P
Sbjct: 62 GHRGRRASPSPPRGRRVSPSPP 83
>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 337 TTALSLISSFRSRDLRASSSRVNVWSGPCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFS 158
++A S +SS R +D R SG P R++ P P S S SRT +R PRS S
Sbjct: 4 SSARSSVSSHRPKDDGGGGPRSGRSSGSSSGPARRSSP--PPPPSGSSSRTPARRPRSPS 61
Query: 157 ----RSLMPNEPVKARG*PCAP 104
R P+ P R P P
Sbjct: 62 GHRGRRASPSPPRGRRVSPSPP 83
>Y08262-1|CAA69589.1| 914|Homo sapiens SCA2 protein.
Length = 914
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -2
Query: 262 SGPCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFSRSLM---PNEPVKARG*PCAPFLAA 92
S P R P H +AH PAP S R SS P S N V A + L
Sbjct: 509 SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF 568
Query: 91 QDHDPRSNYKKNPIS 47
H+P S P++
Sbjct: 569 VSHNPPSEAATPPVA 583
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -2
Query: 262 SGPCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFSRSLM---PNEPVKARG*PCAPFLAA 92
S P R P H +AH PAP S R SS P S N V A + L
Sbjct: 589 SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF 648
Query: 91 QDHDPRSNYKKNPIS 47
H+P S P++
Sbjct: 649 VSHNPPSEAATPPVA 663
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -2
Query: 262 SGPCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFSRSLM---PNEPVKARG*PCAPFLAA 92
S P R P H +AH PAP S R SS P S N V A + L
Sbjct: 301 SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF 360
Query: 91 QDHDPRSNYKKNPIS 47
H+P S P++
Sbjct: 361 VSHNPPSEAATPPVA 375
>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
Length = 1127
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -2
Query: 262 SGPCRRPGHRAAHAVPAPASLSLSRTSSRIPRSFSRSLM---PNEPVKARG*PCAPFLAA 92
S P R P H +AH PAP S R SS P S N V A + L
Sbjct: 379 SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF 438
Query: 91 QDHDPRSNYKKNPIS 47
H+P S P++
Sbjct: 439 VSHNPPSEAATPPVA 453
>BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 289 ASSSRVNVWSGPCRRPGH--RAAHAVPAPASLSLSRTS 182
+SSS ++V G C +PG R A+ +P P S +LS +S
Sbjct: 565 SSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSS 602
>BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 289 ASSSRVNVWSGPCRRPGH--RAAHAVPAPASLSLSRTS 182
+SSS ++V G C +PG R A+ +P P S +LS +S
Sbjct: 565 SSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSS 602
>BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 289 ASSSRVNVWSGPCRRPGH--RAAHAVPAPASLSLSRTS 182
+SSS ++V G C +PG R A+ +P P S +LS +S
Sbjct: 565 SSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSS 602
>AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens
cDNA FLJ36067 fis, clone TESTI2019308, highly similar to
GAR22 PROTEIN. ).
Length = 681
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 289 ASSSRVNVWSGPCRRPGH--RAAHAVPAPASLSLSRTS 182
+SSS ++V G C +PG R A+ +P P S +LS +S
Sbjct: 565 SSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSS 602
>BC036038-1|AAH36038.1| 420|Homo sapiens ZNF25 protein protein.
Length = 420
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 589 RKAPLTVNPRCETA-RP--CSLCSNDAVVRSDIQPLAKHSRRTTFQQPCNCSQ 738
+K+ LTV+ R T +P C+ C +SD L KH R+ T ++P C++
Sbjct: 289 QKSALTVHQRTHTGEKPFECNKCGKTFYYKSD---LTKHQRKHTGEKPYECTE 338
>AL834125-1|CAD38845.1| 362|Homo sapiens hypothetical protein
protein.
Length = 362
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 589 RKAPLTVNPRCETA-RP--CSLCSNDAVVRSDIQPLAKHSRRTTFQQPCNCSQ 738
+K+ LTV+ R T +P C+ C +SD L KH R+ T ++P C++
Sbjct: 231 QKSALTVHQRTHTGEKPFECNKCGKTFYYKSD---LTKHQRKHTGEKPYECTE 280
>AL117337-3|CAH73314.1| 456|Homo sapiens zinc finger protein 25
protein.
Length = 456
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 589 RKAPLTVNPRCETA-RP--CSLCSNDAVVRSDIQPLAKHSRRTTFQQPCNCSQ 738
+K+ LTV+ R T +P C+ C +SD L KH R+ T ++P C++
Sbjct: 325 QKSALTVHQRTHTGEKPFECNKCGKTFYYKSD---LTKHQRKHTGEKPYECTE 374
>AL117337-2|CAH73313.1| 420|Homo sapiens zinc finger protein 25
protein.
Length = 420
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 589 RKAPLTVNPRCETA-RP--CSLCSNDAVVRSDIQPLAKHSRRTTFQQPCNCSQ 738
+K+ LTV+ R T +P C+ C +SD L KH R+ T ++P C++
Sbjct: 289 QKSALTVHQRTHTGEKPFECNKCGKTFYYKSD---LTKHQRKHTGEKPYECTE 338
>AK056452-1|BAB71187.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ31890 fis, clone NT2RP7003203, moderately
similar to ZINC FINGER PROTEIN 184. ).
Length = 456
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 589 RKAPLTVNPRCETA-RP--CSLCSNDAVVRSDIQPLAKHSRRTTFQQPCNCSQ 738
+K+ LTV+ R T +P C+ C +SD L KH R+ T ++P C++
Sbjct: 325 QKSALTVHQRTHTGEKPFECNKCGKTFYYKSD---LTKHQRKHTGEKPYECTE 374
>AJ491696-1|CAD36955.1| 456|Homo sapiens zinc finger protein 25
protein.
Length = 456
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 589 RKAPLTVNPRCETA-RP--CSLCSNDAVVRSDIQPLAKHSRRTTFQQPCNCSQ 738
+K+ LTV+ R T +P C+ C +SD L KH R+ T ++P C++
Sbjct: 325 QKSALTVHQRTHTGEKPFECNKCGKTFYYKSD---LTKHQRKHTGEKPYECTE 374
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2480
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2464
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2448
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2432
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2416
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2400
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa
1-like protein 1 protein.
Length = 2464
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 388 TSS*DICTISTEHVAAGASGSVARRTPSRASAGEGAPRGTHRHTHVV*DIQS 543
+S+ CT S + S + A +PS G APRG RH+H D S
Sbjct: 625 SSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHS 676
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,569,360
Number of Sequences: 237096
Number of extensions: 2970565
Number of successful extensions: 15174
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 13165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15070
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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