Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30581
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 157 2e-37
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 157 3e-37
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 138 1e-31
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 122 1e-26
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 117 3e-25
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 112 1e-23
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 109 6e-23
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 107 4e-22
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 106 5e-22
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 105 2e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 100 8e-20
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 97 3e-19
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 89 1e-16
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 80 5e-14
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 77 4e-13
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 73 1e-11
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 68 2e-10
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 65 2e-09
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 53 9e-06
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 52 2e-05
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 50 6e-05
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 50 8e-05
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 48 2e-04
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 46 8e-04
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 46 0.001
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 45 0.002
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 43 0.007
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 42 0.013
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 40 0.051
UniRef50_Q16JJ8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.47
UniRef50_Q15937 Cluster: Zinc finger protein 79; n=5; Eutheria|R... 37 0.47
UniRef50_Q8NDX1 Cluster: PH and SEC7 domain-containing protein 4... 37 0.63
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 36 1.4
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 35 1.9
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 34 3.3
UniRef50_Q7RU31 Cluster: Putative uncharacterized protein B24P11... 34 4.4
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 33 5.8
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 7.7
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 7.7
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 157 bits (382), Expect = 2e-37
Identities = 83/165 (50%), Positives = 104/165 (63%), Gaps = 3/165 (1%)
Frame = +3
Query: 231 CALQLPRHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 410
C DLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT Y
Sbjct: 96 CLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSY 155
Query: 411 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK* 590
AQH QVR IRKKM EI+TR+V ++L+EVVNKL + + + IYPL DV +RK
Sbjct: 156 AQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKV 215
Query: 591 KC*RGPVFEISKLMGTFTGEGRLEARG---KAGDKSETAGGLTKP 716
K + P FE+ KLM GEG + + G K E A G P
Sbjct: 216 KMLKKPKFELGKLM-ELHGEGSSSGKATGDETGAKVERADGYEPP 259
Score = 131 bits (316), Expect = 2e-29
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---E 78
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGM 255
+FRKF+LI E VQG+N L NFHGM
Sbjct: 79 VAFRKFKLITEDVQGKNCLTNFHGM 103
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 157 bits (381), Expect = 3e-37
Identities = 81/147 (55%), Positives = 104/147 (70%)
Frame = +3
Query: 258 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 437
LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ I
Sbjct: 108 LTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNI 167
Query: 438 RKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVFE 617
R KM II R++T+++L+ VV KL + + + +YPL DV IRK K + P F+
Sbjct: 168 RAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFD 227
Query: 618 ISKLMGTFTGEGRLEARGKAGDKSETA 698
+S LM G+G GKA + S A
Sbjct: 228 LSSLM-ELHGDG----GGKAAEVSTGA 249
Score = 153 bits (370), Expect = 6e-36
Identities = 71/85 (83%), Positives = 77/85 (90%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DAE
Sbjct: 22 VDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 81
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGM 255
RSFRKF+L+AE V GR+VL NFHGM
Sbjct: 82 RSFRKFKLVAESVNGRDVLTNFHGM 106
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 138 bits (335), Expect = 1e-31
Identities = 66/126 (52%), Positives = 87/126 (69%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 434
D TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R
Sbjct: 499 DFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQ 558
Query: 435 IRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVF 614
IR+KM EI+T T+ +L+E+V K + R + IYPL++V IRK K + P F
Sbjct: 559 IRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKF 618
Query: 615 EISKLM 632
++ KLM
Sbjct: 619 DLGKLM 624
Score = 127 bits (306), Expect = 3e-28
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +1
Query: 4 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 183
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 184 SFRKFRLIAEYVQGRNVLCNFHGM 255
++RK RL AE VQGRNVL NF GM
Sbjct: 475 AYRKIRLRAEDVQGRNVLTNFWGM 498
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 122 bits (294), Expect = 1e-26
Identities = 62/140 (44%), Positives = 90/140 (64%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 434
D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RA
Sbjct: 104 DFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRA 163
Query: 435 IRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVF 614
IR+KM EII R+ + L+++ NKL + R + GIYPL++V IRK K + P F
Sbjct: 164 IRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKF 223
Query: 615 EISKLMGTFTGEGRLEARGK 674
++ L+ GE + +G+
Sbjct: 224 DLGGLL-ALHGESTTDEQGQ 242
Score = 109 bits (262), Expect = 7e-23
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +1
Query: 4 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 183
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 184 SFRKFRLIAEYVQGRNVLCNFHGM 255
+FRK +L + VQG+N L NFHG+
Sbjct: 80 AFRKIKLRVDEVQGKNCLTNFHGL 103
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 117 bits (282), Expect = 3e-25
Identities = 62/94 (65%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D E
Sbjct: 22 VDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND---E 75
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHG--MTSQPISS 276
+FRKF+LI E VQG+N L NFHG +TS I+S
Sbjct: 76 VAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITS 109
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +3
Query: 435 IRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVF 614
IRKKM EI+TR+V ++L+EVVNKL + + + IYPL DV +RK K + P F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 615 EISKLMGTFTGEGRLEARG---KAGDKSETAGGLTKP 716
E+ KLM GEG + + G K E A G P
Sbjct: 171 ELGKLM-ELHGEGCSSGKATGDETGVKVERADGYELP 206
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 112 bits (269), Expect = 1e-23
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGM 255
+FRKF+LI E VQG+ L NF M
Sbjct: 79 VAFRKFKLITEDVQGKRCLINFRSM 103
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 109 bits (263), Expect = 6e-23
Identities = 56/89 (62%), Positives = 69/89 (77%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 168
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 169 TDAERSFRKFRLIAEYVQGRNVLCNFHGM 255
D + FRK +L AE V+GRNVL NF+GM
Sbjct: 74 DDESQVFRKIKLRAEEVEGRNVLTNFYGM 102
Score = 105 bits (251), Expect = 2e-21
Identities = 60/139 (43%), Positives = 84/139 (60%), Gaps = 14/139 (10%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 434
DLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+A
Sbjct: 103 DLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKA 162
Query: 435 IRKKMCEIITRDVTNSELREVVNKL--------------FLTPLPRTSRRPAMGIYPLRD 572
IRKKM +I+T V++++L+ VV+ L F L R I+P+ +
Sbjct: 163 IRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHN 222
Query: 573 VCIRK*KC*RGPVFEISKL 629
V IRK K + P + +KL
Sbjct: 223 VFIRKVKVLKTPKVDAAKL 241
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 107 bits (256), Expect = 4e-22
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQ 425
D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +Q
Sbjct: 107 DITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQ 166
Query: 426 VRAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RG 605
VRAIR+K+ IT + + E L + + I+PL+++ IRK K +
Sbjct: 167 VRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKR 226
Query: 606 PVFEISKLMGTFTGEGRLE-ARGKAGDKSETA 698
P + +K+ ++ E + E A G+ G E A
Sbjct: 227 PKLDATKIAELYSHEKKGEKATGRDGAPEEQA 258
Score = 89.0 bits (211), Expect = 1e-16
Identities = 39/85 (45%), Positives = 60/85 (70%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGM 255
+++RK +L+ + V GRN +F+G+
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGL 106
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 106 bits (255), Expect = 5e-22
Identities = 55/148 (37%), Positives = 84/148 (56%)
Frame = +3
Query: 231 CALQLPRHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 410
C DLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+ Y
Sbjct: 22 CLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKSHAY 80
Query: 411 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK* 590
AQ T+++ +R ++ E++ R+V +L+ VV KL + + + A I+PL +RK
Sbjct: 81 AQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKV 140
Query: 591 KC*RGPVFEISKLMGTFTGEGRLEARGK 674
K + P ++ +++ EG+ + G+
Sbjct: 141 KVLKKPKLDLGRIL-ELHSEGKADEFGE 167
Score = 36.7 bits (81), Expect = 0.63
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 187 FRKFRLIAEYVQGRNVLCNFHGM 255
FRKF+L E VQGR+ L NFHGM
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGM 29
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 105 bits (251), Expect = 2e-21
Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 434
D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++
Sbjct: 103 DSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKD 162
Query: 435 IRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVF 614
IRKK+ EI+ ++V+ + +++ L + + I+PL+++ +RK K + P
Sbjct: 163 IRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKV 222
Query: 615 EISKLMGTFTGEGR---LEARGKAGDKSETAGGLTKPSRSKRSVL 740
+ KL + R + R K + +TA L K RS++ ++
Sbjct: 223 DAQKLREFYDDSNRTKTAQVRRKGQAEDQTALNLIKQGRSRQRII 267
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/97 (39%), Positives = 61/97 (62%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGMTSQPISSGGWLK 291
++RK +LI + V+G +F+G+ S G +K
Sbjct: 78 MAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIK 114
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 99.5 bits (237), Expect = 8e-20
Identities = 45/84 (53%), Positives = 64/84 (76%)
Frame = +3
Query: 258 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 437
LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ I
Sbjct: 107 LTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKI 166
Query: 438 RKKMCEIITRDVTNSELREVVNKL 509
RK M +IT++ + EL + V+ L
Sbjct: 167 RKIMNNLITKEAASRELTQFVDYL 190
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 4 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 183
+PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL +
Sbjct: 24 EPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFGA 83
Query: 184 SFRKFRLIAEYVQGRNVLCNFHGM 255
KF+ E V G++ L FHG+
Sbjct: 84 YNYKFK--CEDVNGKDCLMIFHGL 105
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 4 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 183
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 184 SFRKFRLIAEYVQGRNVLCNFHGM 255
++RK R + VQGRN+L FH M
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSM 106
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/126 (33%), Positives = 74/126 (58%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 434
++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+
Sbjct: 107 EVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKW 166
Query: 435 IRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVF 614
+R ++ ++I R ++ +++E V+ L L R I PLR++ IRK + R P F
Sbjct: 167 LRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKF 226
Query: 615 EISKLM 632
+ L+
Sbjct: 227 DAQALL 232
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/113 (36%), Positives = 69/113 (61%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 434
+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KTCY +H+ +
Sbjct: 56 ELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKK 115
Query: 435 IRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*K 593
IRK M ++I +++ ++++++ KL + + I+PL++ C+RK K
Sbjct: 116 IRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVK 168
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/112 (33%), Positives = 66/112 (58%)
Frame = +3
Query: 258 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 437
LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+
Sbjct: 101 LTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRAL 160
Query: 438 RKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*K 593
R+++ +II ++ N ++++ +++++ + I+P+ V IRK K
Sbjct: 161 RRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIK 212
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 77.4 bits (182), Expect = 4e-13
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVR 431
DLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+ QV
Sbjct: 89 DLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVH 147
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPV 611
I +I+ D ++L+EV+NKL + + + IYPL DV +RK K + P
Sbjct: 148 QIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPK 205
Query: 612 FEISKL 629
++ KL
Sbjct: 206 LDLGKL 211
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +1
Query: 16 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 195
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D + RK
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQND---KVVVRK 68
Query: 196 FRLIAEYVQGRNVLCNFHGM 255
F+LI E ++G+N L N +GM
Sbjct: 69 FKLITEDMRGKNGLTNSYGM 88
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +1
Query: 4 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 183
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 184 SFRKFRLIAEYVQGRNVLCNFHGMTSQPISSGGWLKNG 297
KF L + V L NFHGM G + G
Sbjct: 80 GNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKG 117
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/126 (28%), Positives = 59/126 (46%)
Frame = +3
Query: 231 CALQLPRHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 410
C D+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+
Sbjct: 96 CLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCH 155
Query: 411 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK* 590
+ +R +R + E + ++ + +V KL + I RDV IR+
Sbjct: 156 VKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRV 215
Query: 591 KC*RGP 608
K + P
Sbjct: 216 KVVKRP 221
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 68.1 bits (159), Expect = 2e-10
Identities = 42/112 (37%), Positives = 65/112 (58%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
H+LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q++
Sbjct: 85 HELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQ 135
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
AIR+ M +I+ + + ++ + + L L R A IYPLR V IRK
Sbjct: 136 AIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRK 187
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +3
Query: 207 RRICART*CALQLPRHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 386
R I A + Q LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K +
Sbjct: 84 RSIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLA 143
Query: 387 LSQRKTCYAQHTQVRAIRKKMCEIIT 464
S + YA + R +R M + +T
Sbjct: 144 NSHKNHTYANSHKARQVRDVMIKALT 169
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 52.8 bits (121), Expect = 9e-06
Identities = 35/112 (31%), Positives = 56/112 (50%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
HD+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S KT
Sbjct: 89 HDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT--------- 139
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
IRKK+ E +T E V + PR + IYP+R + IRK
Sbjct: 140 EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRK 191
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 52.0 bits (119), Expect = 2e-05
Identities = 34/113 (30%), Positives = 57/113 (50%)
Frame = +3
Query: 249 RHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 428
RH+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q
Sbjct: 81 RHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQE 131
Query: 429 RAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
+AIR+ M +++ + ++++ + L A IYPLR V I+K
Sbjct: 132 KAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKK 184
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 50.0 bits (114), Expect = 6e-05
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
H L D +R +V++ + I+ IDV T DGY +RV + FT T A+ +Q R
Sbjct: 78 HRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQR 128
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFL----TPLPRTSRRPAMGIYPLRDVCIRK 587
AIRK+M ++I + + E + + +P + IYP+R IRK
Sbjct: 129 AIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRK 184
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 49.6 bits (113), Expect = 8e-05
Identities = 37/113 (32%), Positives = 58/113 (51%)
Frame = +3
Query: 249 RHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 428
R +LT + L + ++ + IE +DV T DGY LRV + FT + + KT +Q
Sbjct: 87 RFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQK 137
Query: 429 RAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
RAIR M +I+ ++ + + + L +P + A IYP+R V IRK
Sbjct: 138 RAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRK 190
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/112 (30%), Positives = 56/112 (50%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
H+LT D +R +VK+ + I+AN+ V T DG+ +RV I T K A+ +Q+
Sbjct: 84 HELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIE 134
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
+IR+ M ++ + E +N++ + + IYPLR V I K
Sbjct: 135 SIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGK 186
Score = 40.7 bits (91), Expect = 0.038
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHG 252
FR+ E + G + +F G
Sbjct: 62 NIKMIFRI--EEIGGNSAYTSFLG 83
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 46.4 bits (105), Expect = 8e-04
Identities = 35/113 (30%), Positives = 55/113 (48%)
Frame = +3
Query: 249 RHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 428
+++LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q
Sbjct: 81 KYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQE 131
Query: 429 RAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
+AIR+ M + + + V+ + L A IYPLR V I+K
Sbjct: 132 KAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQK 184
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = -1
Query: 225 SLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHR 46
SLH+ G S+ + + L ISQGN ++S L+ FR + S + +K A++ AE R
Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118
Query: 45 RSLDIVPIFASEWV 4
R L+++P+ S+ V
Sbjct: 119 RRLNVIPVLLSKRV 132
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 45.2 bits (102), Expect = 0.002
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
H+L D +R + ++ + + +V T DGY LRV + FT R+ C + +Q
Sbjct: 82 HELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKS 132
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLT----PLPRTSRRPAMGIYPLRDVCIRK*K 593
AIRK M EI+ + S L E++ + + L A IYPLR V I K K
Sbjct: 133 AIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSK 190
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 503 QVIPDSIAKDIEKACHGHLPSARCLHPKVKVLKRPRF 613
++IPDSI KDIEKAC P KVK+LK+P+F
Sbjct: 2 KLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKF 38
Score = 38.7 bits (86), Expect = 0.16
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 501 NKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVFEISKLM---GTFTGEGRLEARG 671
NKL + + + IYPL DV +RK K + P FE+ KLM G + G+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGK-AIGD 59
Query: 672 KAGDKSETAGGLTKP 716
+ G K E A G P
Sbjct: 60 ETGAKVERAEGYEPP 74
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 42.3 bits (95), Expect = 0.013
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQV 428
H+L+ D +R +V++ + I +D+ T DG+ LRV + T Y H Q
Sbjct: 90 HELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLAL----------TAYRVHREQA 139
Query: 429 RAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGP 608
IRK M +++ + E V ++ L A I PLR I K K P
Sbjct: 140 TTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFAP 199
Query: 609 VFEISK 626
+ + K
Sbjct: 200 LIKEGK 205
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens
(Human)
Length = 119
Score = 40.3 bits (90), Expect = 0.051
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTT 78
+D F++KDWYDVKA +MF+ R +G T
Sbjct: 22 IDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q16JJ8 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 163
Score = 37.1 bits (82), Expect = 0.47
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 574 FASESESVEEAPFSRSRS*WELSR--AKGGWKQGGKPETSLKRP 699
FASE++SV E FS S W+ ++ AK G K G KP T +K+P
Sbjct: 9 FASENDSVPE--FSASEDEWDPTKENAKSGSKPGRKPNTKVKKP 50
>UniRef50_Q15937 Cluster: Zinc finger protein 79; n=5; Eutheria|Rep:
Zinc finger protein 79 - Homo sapiens (Human)
Length = 498
Score = 37.1 bits (82), Expect = 0.47
Identities = 34/109 (31%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Frame = -2
Query: 713 LRKPSGRFRLVSGFPP-------CFQPPFAR----ESSHQLRDLENGASSTLSLSDANIA 567
LR PS ++++SG PP FQ P +S H DLE + LS
Sbjct: 104 LRSPSPGWKIISGSPPEQALSEASFQDPCVEMPPGDSDHGTSDLEKSFNLRPVLSP---Q 160
Query: 566 QRVDAHGRPSRCPWQWSQE*LVHHLPEFRVSDVACNDFTHFLSDCSDLS 420
QRV RP +C L R ACN+ S CS LS
Sbjct: 161 QRVPVEARPRKCETHTESFKNSEILKPHRAKPYACNECGKAFSYCSSLS 209
>UniRef50_Q8NDX1 Cluster: PH and SEC7 domain-containing protein 4;
n=17; Eutheria|Rep: PH and SEC7 domain-containing
protein 4 - Homo sapiens (Human)
Length = 1056
Score = 36.7 bits (81), Expect = 0.63
Identities = 26/81 (32%), Positives = 35/81 (43%)
Frame = -3
Query: 718 EGFVSPPAVSDLSPAFPLASNRPSPVKVPINFEISKTGPLQHFHFRMQTSRRG*MPMAGL 539
EG P D+ P L S ++ P+N P+ + Q+ G P AG
Sbjct: 521 EGTARPAETGDVQPDIHLTSAEHENLRTPMNSSWLPGSPMP----QAQSPEEGQRPPAG- 575
Query: 538 LDVLGNGVRNNLFTTSLSSEL 476
D L NGVRNN +L+S L
Sbjct: 576 -DKLANGVRNNKVAWNLASRL 595
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 35.5 bits (78), Expect = 1.4
Identities = 30/116 (25%), Positives = 52/116 (44%)
Frame = +3
Query: 240 QLPRHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 419
Q HD T + L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 87 QFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT----- 141
Query: 420 TQVRAIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
IR +M +II + E V+ + + L ++PL+ V I K
Sbjct: 142 ----EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFK 193
Score = 33.1 bits (72), Expect = 7.7
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = +1
Query: 4 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 183
D + K WYD+ P F +G T N L GR+ E+SL DL +
Sbjct: 17 DTWKSKVWYDIYTPQSFGGDVIGQTPAN-------DPANLIGRISEISLRDLTNEHSKHM 69
Query: 184 SFRKFRLIAEYVQGRNVLCNFHG 252
+ F++ + V G N F G
Sbjct: 70 TRMYFKV--DGVSGNNATSQFVG 90
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +3
Query: 249 RHDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 401
R++ + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 84 RYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = +1
Query: 1 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
V+ + K+WY V AP K+ +G + + E + GRV VSL +L D +
Sbjct: 12 VEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGELIQDYSKQ 64
Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGMTSQ 264
F+++ N H MT +
Sbjct: 65 NVRASFKIMNVAGDAAYTQFNGHEMTKE 92
>UniRef50_Q7RU31 Cluster: Putative uncharacterized protein
B24P11.90; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B24P11.90 - Neurospora crassa
Length = 273
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 505 SYS*LHCQGHREGLPWASTLCAMF 576
SY HC GHRE + W ST C F
Sbjct: 43 SYGRPHCLGHREPMNWRSTFCCSF 66
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 33.5 bits (73), Expect = 5.8
Identities = 28/112 (25%), Positives = 50/112 (44%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
H T+ +R +++++ I+ IDV T DGY++R+ + T K Q + +
Sbjct: 96 HHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQ 146
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK 587
+IR K +++ V + + + L + IYP R V IRK
Sbjct: 147 SIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRK 198
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 7.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 473 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 366
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.1 bits (72), Expect = 7.7
Identities = 28/114 (24%), Positives = 52/114 (45%)
Frame = +3
Query: 252 HDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 431
H TTD +R M+++ + I+A+ VKT D +++ + T T A+ +Q +
Sbjct: 86 HKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQK 136
Query: 432 AIRKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*K 593
+R+ + +++ E++ + L A IYPL+ V I K K
Sbjct: 137 YMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSK 190
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,081,400
Number of Sequences: 1657284
Number of extensions: 17681320
Number of successful extensions: 53386
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 50913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53345
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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