Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30581
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   6.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 280 GWLKNGRLSS 309
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 535 DVLGNGVRNNLFTTSLSSELVTSRVM 458
           DV+  G R   F T+L SEL   +V+
Sbjct: 248 DVIEKGKRPGAFRTTLGSELSKVKVI 273


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 390 SRSPYW*NQCRRHVERIHRLSSHQC 316
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 120 SFRSNFRSLGTVDKRGADLPLAEHRRSLDIVP 25
           S  S+  SL  + K  A LP+ +H R   +VP
Sbjct: 2   SLYSSINSLVLISKIFALLPVKKHHRLEKLVP 33


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 639 KFPSTSRSRKRGLFNTFTFGCKHRAEG 559
           +FP T   + RG  ++F    KH+  G
Sbjct: 148 EFPETKPKKIRGKISSFFSKLKHKIVG 174


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 703 PPAVSDLSPAFPLASNRPSPVKVP 632
           PPA +       +ASN  +P+ +P
Sbjct: 35  PPATTSSGSPASVASNASAPLHIP 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,709
Number of Sequences: 336
Number of extensions: 4320
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)