Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30581
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   134   6e-32
Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z83016-1|CAB05407.1|  451|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z68314-8|CAA92666.1|  451|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z54281-9|CAA91052.1|  451|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U70852-15|AAK29824.1|  543|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  134 bits (324), Expect = 6e-32
 Identities = 63/86 (73%), Positives = 74/86 (86%)
 Frame = +1

Query: 1   VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 180
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL    ++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76

Query: 181 RSFRKFRLIAEYVQGRNVLCNFHGMT 258
             FRKF+LIAE VQG+NVL NFH M+
Sbjct: 77  ADFRKFKLIAEDVQGKNVLTNFHAMS 102



 Score =  107 bits (258), Expect = 6e-24
 Identities = 55/124 (44%), Positives = 78/124 (62%)
 Frame = +3

Query: 258 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 437
           +T DKL  +VKKW TLIEAN  VKTTDGY LRVF I FT K     +KT Y + +++R I
Sbjct: 103 MTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKI 162

Query: 438 RKKMCEIITRDVTNSELREVVNKLFLTPLPRTSRRPAMGIYPLRDVCIRK*KC*RGPVFE 617
           R +M   I ++VT  +L+EVV+KL    + +   +    +YPL++V IRK K  + P  +
Sbjct: 163 RSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVD 222

Query: 618 ISKL 629
           + +L
Sbjct: 223 LGRL 226


>Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical
           protein K10D3.4 protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 561 GRCPWQAFSMSLAMESGITCSP 496
           G CP QA++ SL+ +SG +C P
Sbjct: 510 GCCPTQAYTCSLSYKSGASCGP 531


>Z83016-1|CAB05407.1|  451|Caenorhabditis elegans Hypothetical
           protein F46C5.9 protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = -2

Query: 704 PSGRFRLVSGFPP---CFQPPFARESSHQ 627
           P GRF +VSGF P    F+P F R+ + Q
Sbjct: 243 PDGRFIIVSGFTPDVFVFEPIFTRDGTFQ 271


>Z68314-8|CAA92666.1|  451|Caenorhabditis elegans Hypothetical
           protein F46C5.9 protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = -2

Query: 704 PSGRFRLVSGFPP---CFQPPFARESSHQ 627
           P GRF +VSGF P    F+P F R+ + Q
Sbjct: 243 PDGRFIIVSGFTPDVFVFEPIFTRDGTFQ 271


>Z54281-9|CAA91052.1|  451|Caenorhabditis elegans Hypothetical
           protein F46C5.9 protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = -2

Query: 704 PSGRFRLVSGFPP---CFQPPFARESSHQ 627
           P GRF +VSGF P    F+P F R+ + Q
Sbjct: 243 PDGRFIIVSGFTPDVFVFEPIFTRDGTFQ 271


>U70852-15|AAK29824.1|  543|Caenorhabditis elegans Hypothetical
           protein F45E4.11 protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
 Frame = -3

Query: 337 SVVFTSM---LASMRVCHFLTIHLS---LSVVRSCRGSCRAH 230
           SV+F SM   LA+M  C F+T+ +S   L+V   C  SC  H
Sbjct: 60  SVLFPSMRLMLAAMLCCCFITLSISSSNLAVALICMTSCPVH 101


>Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical
           protein B0001.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 121 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 231
           L+G  + +S+ D +A TD E S +  R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237


>AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical
           protein C03H5.5 protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +3

Query: 387 LSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS-ELREVVN-KLFLTPLPRTSRRP 545
           + + K   A+  ++R   ++  +++    T S E+ +  N  LF+TP P+TSRRP
Sbjct: 14  IKKLKEDLAREKELRKEAERQLKVLLDKQTGSLEITKPENIGLFITPEPQTSRRP 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,759,138
Number of Sequences: 27780
Number of extensions: 418951
Number of successful extensions: 1319
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)