Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30578
         (796 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5291 Cluster: PREDICTED: similar to conserved ...    95   2e-18
UniRef50_Q9W068 Cluster: CG12026-PA, isoform A; n=5; Endopterygo...    94   3e-18
UniRef50_UPI000065FABD Cluster: Homolog of Gallus gallus "Periph...    35   2.0  
UniRef50_UPI0000F1D7CE Cluster: PREDICTED: hypothetical protein;...    33   8.3  

>UniRef50_UPI00015B5291 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 289

 Score = 94.7 bits (225), Expect = 2e-18
 Identities = 51/83 (61%), Positives = 63/83 (75%)
 Frame = +1

Query: 4   LAAIGCLDGAVLSALAFILATRHVRLRPDAGYPPPSLYKGEVNNGYVTDATSVSGSRKSL 183
           LAAI  LD A L+ALAFILA+RHV+L+P+  +   SLYKGEVN GYV +A SV+GSRKSL
Sbjct: 175 LAAIAALDAATLAALAFILASRHVKLQPEP-FNNGSLYKGEVNPGYVNEAQSVAGSRKSL 233

Query: 184 ALQPVLIMHPHAPMDMDTYSHYS 252
           +L+PVL++   AP D D YS  S
Sbjct: 234 SLRPVLLV---APPDQDRYSELS 253


>UniRef50_Q9W068 Cluster: CG12026-PA, isoform A; n=5;
           Endopterygota|Rep: CG12026-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 265

 Score = 94.3 bits (224), Expect = 3e-18
 Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
 Frame = +1

Query: 4   LAAIGCLDGAVLSALAFILATRHVRLRPDAGYPPPSLYKGEVNNGYVTDATSVSGSRKS- 180
           LA IGC+DG VL+ LAFILATRHVRL+PD  Y   SLYKGE+NN Y+TDA S++GSRKS 
Sbjct: 178 LAIIGCIDGVVLATLAFILATRHVRLQPDPIY-QNSLYKGEINNAYLTDAISLAGSRKSN 236

Query: 181 -----LALQPVLIMHPHAPMDMDTYSHY 249
                L LQP+L++ P     +  +S Y
Sbjct: 237 PRITGLNLQPILLVAPPNEDSISQFSRY 264


>UniRef50_UPI000065FABD Cluster: Homolog of Gallus gallus
           "Peripheral myelin protein 22.; n=1; Takifugu
           rubripes|Rep: Homolog of Gallus gallus "Peripheral
           myelin protein 22. - Takifugu rubripes
          Length = 234

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +1

Query: 1   ILAAIGCLDGAVLSALAFILATRH-VRLRPDA 93
           ILA +G LD A+L+ LAF+LA R    L PDA
Sbjct: 202 ILAVLGVLDAAILATLAFVLANRQDALLPPDA 233


>UniRef50_UPI0000F1D7CE Cluster: PREDICTED: hypothetical protein;
           n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 593

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
 Frame = -1

Query: 703 FTTLNIINKC*VQNLTAKI*IIYILVLTNIYLKYN-FSSINFNLICSAVLYVTSLFIRLH 527
           FTT +++N   + NLT  I II I + TNI   ++ F++IN N I + ++Y        +
Sbjct: 305 FTTTDVLNI--IPNLTIIIIIITITIFTNIITNFSTFTTINLNAIFN-IIY--------N 353

Query: 526 LLSTRCTIKSIL*CIKTTPVLFLPSLVYRFEIIYKSAI-SRKLPVLFI 386
           L++T  T   +L  I    ++ +   ++   II  SA  S  L   FI
Sbjct: 354 LITTNFTTTDVLNIIPNLIIIIITITIFFNIIINISAFTSINLTTTFI 401


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,963,569
Number of Sequences: 1657284
Number of extensions: 12600267
Number of successful extensions: 28898
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28893
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)